RNA–Protein interactions for RNA: ENST00000558204.5

LRRC49-208, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 559 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-208ENST00000558204 DSG3P32926 999 aa11.93□□□□□ -0.5
LRRC49-208ENST00000558204 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
LRRC49-208ENST00000558204 FHDC1Q9C0D6 1143 aaPredicted RBP11.93□□□□□ -0.5
LRRC49-208ENST00000558204 MYOM1P52179 1685 aa11.93□□□□□ -0.5
LRRC49-208ENST00000558204 LMO7Q8WWI1 1683 aa11.93□□□□□ -0.5
LRRC49-208ENST00000558204 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
LRRC49-208ENST00000558204 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
LRRC49-208ENST00000558204 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
LRRC49-208ENST00000558204 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
LRRC49-208ENST00000558204 USP19O94966 1318 aa11.92□□□□□ -0.5
LRRC49-208ENST00000558204 PTGER2P43116 358 aa11.92□□□□□ -0.5
LRRC49-208ENST00000558204 SYT17Q9BSW7 474 aa11.92□□□□□ -0.5
LRRC49-208ENST00000558204 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
LRRC49-208ENST00000558204 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
LRRC49-208ENST00000558204 PTF1AQ7RTS3 328 aa11.91□□□□□ -0.5
LRRC49-208ENST00000558204 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
LRRC49-208ENST00000558204 SRPK2P78362 688 aaKnown RBP11.9□□□□□ -0.5
LRRC49-208ENST00000558204 SLC15A2Q16348 729 aa11.9□□□□□ -0.5
LRRC49-208ENST00000558204 TXNRD1Q16881 649 aa11.9□□□□□ -0.5
LRRC49-208ENST00000558204 MTFR1LQ9H019 292 aa11.9□□□□□ -0.5
LRRC49-208ENST00000558204 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
LRRC49-208ENST00000558204 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
LRRC49-208ENST00000558204 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
LRRC49-208ENST00000558204 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
LRRC49-208ENST00000558204 NLRP6P59044 892 aa11.89□□□□□ -0.51
LRRC49-208ENST00000558204 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
LRRC49-208ENST00000558204 PROM2Q8N271 834 aa11.89□□□□□ -0.51
LRRC49-208ENST00000558204 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
LRRC49-208ENST00000558204 GPR162Q16538 588 aa11.88□□□□□ -0.51
LRRC49-208ENST00000558204 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
LRRC49-208ENST00000558204 MARCH10Q8NA82 808 aaPredicted RBP11.88□□□□□ -0.51
LRRC49-208ENST00000558204 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
LRRC49-208ENST00000558204 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
LRRC49-208ENST00000558204 PPIP5K1Q6PFW1 1433 aa11.87□□□□□ -0.51
LRRC49-208ENST00000558204 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
LRRC49-208ENST00000558204 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
LRRC49-208ENST00000558204 ARXQ96QS3 562 aa11.87□□□□□ -0.51
LRRC49-208ENST00000558204 CHD4Q14839 1912 aa11.87□□□□□ -0.51
LRRC49-208ENST00000558204 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
LRRC49-208ENST00000558204 EXOC5O00471 708 aa11.86□□□□□ -0.51
LRRC49-208ENST00000558204 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
LRRC49-208ENST00000558204 AKAP12Q02952 1782 aa11.86□□□□□ -0.51
LRRC49-208ENST00000558204 WDR17Q8IZU2 1322 aa11.86□□□□□ -0.51
LRRC49-208ENST00000558204 SOX12O15370 315 aa11.85□□□□□ -0.51
LRRC49-208ENST00000558204 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
LRRC49-208ENST00000558204 UTRNP46939 3433 aa11.84□□□□□ -0.51
LRRC49-208ENST00000558204 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
LRRC49-208ENST00000558204 BRD4O60885 1362 aaPredicted RBP11.83□□□□□ -0.52
LRRC49-208ENST00000558204 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
LRRC49-208ENST00000558204 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
LRRC49-208ENST00000558204 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
LRRC49-208ENST00000558204 BCL9O00512 1426 aa11.83□□□□□ -0.52
LRRC49-208ENST00000558204 WNK3Q9BYP7 1800 aa11.83□□□□□ -0.52
LRRC49-208ENST00000558204 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
LRRC49-208ENST00000558204 CABP1Q9NZU7 370 aa11.82□□□□□ -0.52
LRRC49-208ENST00000558204 USP6P35125 1406 aa11.82□□□□□ -0.52
LRRC49-208ENST00000558204 SLIT3O75094 1523 aa11.81□□□□□ -0.52
LRRC49-208ENST00000558204 CPSF1Q10570 1443 aaKnown RBP11.81□□□□□ -0.52
LRRC49-208ENST00000558204 POLD1P28340 1107 aa11.81□□□□□ -0.52
LRRC49-208ENST00000558204 KCNH5Q8NCM2 988 aa11.81□□□□□ -0.52
LRRC49-208ENST00000558204 CENPJQ9HC77 1338 aaPredicted RBP11.81□□□□□ -0.52
LRRC49-208ENST00000558204 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
LRRC49-208ENST00000558204 ARHGEF25Q86VW2 580 aa11.79□□□□□ -0.52
LRRC49-208ENST00000558204 COL18A1P39060 1754 aa11.79□□□□□ -0.52
LRRC49-208ENST00000558204 CCDC7Q96M83 1385 aa11.79□□□□□ -0.52
LRRC49-208ENST00000558204 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
LRRC49-208ENST00000558204 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
LRRC49-208ENST00000558204 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
LRRC49-208ENST00000558204 RGPD5Q99666 1765 aa11.77□□□□□ -0.52
LRRC49-208ENST00000558204 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
LRRC49-208ENST00000558204 PIK3C2AO00443 1686 aa11.77□□□□□ -0.53
LRRC49-208ENST00000558204 NHSQ6T4R5 1651 aa11.77□□□□□ -0.53
LRRC49-208ENST00000558204 QRICH2Q9H0J4 1663 aa11.76□□□□□ -0.53
LRRC49-208ENST00000558204 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
LRRC49-208ENST00000558204 TTC21BQ7Z4L5 1316 aa11.76□□□□□ -0.53
LRRC49-208ENST00000558204 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
LRRC49-208ENST00000558204 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
LRRC49-208ENST00000558204 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
LRRC49-208ENST00000558204 KAT6BQ8WYB5 2073 aa11.74□□□□□ -0.53
LRRC49-208ENST00000558204 IL2RBP14784 551 aa11.74□□□□□ -0.53
LRRC49-208ENST00000558204 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
LRRC49-208ENST00000558204 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
LRRC49-208ENST00000558204 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
LRRC49-208ENST00000558204 EVC2Q86UK5 1308 aa11.74□□□□□ -0.53
LRRC49-208ENST00000558204 PAPPAQ13219 1627 aa11.74□□□□□ -0.53
LRRC49-208ENST00000558204 BTAF1O14981 1849 aa11.73□□□□□ -0.53
LRRC49-208ENST00000558204 GRIN3BO60391 1043 aa11.73□□□□□ -0.53
LRRC49-208ENST00000558204 TRPM1Q7Z4N2 1603 aa11.73□□□□□ -0.53
LRRC49-208ENST00000558204 TTC21AQ8NDW8 1320 aa11.73□□□□□ -0.53
LRRC49-208ENST00000558204 ABCC6O95255 1503 aa11.72□□□□□ -0.53
LRRC49-208ENST00000558204 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
LRRC49-208ENST00000558204 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
LRRC49-208ENST00000558204 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
LRRC49-208ENST00000558204 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
LRRC49-208ENST00000558204 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.53
LRRC49-208ENST00000558204 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.53
LRRC49-208ENST00000558204 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.53
LRRC49-208ENST00000558204 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
LRRC49-208ENST00000558204 ERBB3P21860 1342 aa11.7□□□□□ -0.54
LRRC49-208ENST00000558204 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms