RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 CCDC116Q8IYX3 515 aa8.04□□□□□ -1.12
CRNDE-204ENST00000558031 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
CRNDE-204ENST00000558031 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
CRNDE-204ENST00000558031 NDUFB9Q9Y6M9 179 aa8.04□□□□□ -1.12
CRNDE-204ENST00000558031 ZBBXA8MT70 800 aa8.03□□□□□ -1.12
CRNDE-204ENST00000558031 DZIP3Q86Y13 1208 aaKnown RBP8.03□□□□□ -1.12
CRNDE-204ENST00000558031 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
CRNDE-204ENST00000558031 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
CRNDE-204ENST00000558031 MRPL14Q6P1L8 145 aaKnown RBP8.02□□□□□ -1.13
CRNDE-204ENST00000558031 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
CRNDE-204ENST00000558031 EMILIN1Q9Y6C2 1016 aa8.02□□□□□ -1.13
CRNDE-204ENST00000558031 GPR37L1O60883 481 aa8.01□□□□□ -1.13
CRNDE-204ENST00000558031 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
CRNDE-204ENST00000558031 NBPF20Q3BBV1 942 aa8.01□□□□□ -1.13
CRNDE-204ENST00000558031 PPP1R26Q5T8A7 1209 aaPredicted RBP8.01□□□□□ -1.13
CRNDE-204ENST00000558031 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
CRNDE-204ENST00000558031 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
CRNDE-204ENST00000558031 ZFP42Q96MM3 310 aa8□□□□□ -1.13
CRNDE-204ENST00000558031 RAB15P59190 212 aa7.99□□□□□ -1.13
CRNDE-204ENST00000558031 DHX9Q08211 1270 aaKnown RBP7.99□□□□□ -1.13
CRNDE-204ENST00000558031 NR1H3Q13133 447 aa7.99□□□□□ -1.13
CRNDE-204ENST00000558031 PURBQ96QR8 312 aaKnown RBP7.99□□□□□ -1.13
CRNDE-204ENST00000558031 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
CRNDE-204ENST00000558031 PCDHB9Q9Y5E1 797 aa7.99□□□□□ -1.13
CRNDE-204ENST00000558031 SCARF1Q14162 830 aa7.98□□□□□ -1.13
CRNDE-204ENST00000558031 MEIOBQ8N635 442 aa7.98□□□□□ -1.13
CRNDE-204ENST00000558031 TBC1D2BQ9UPU7 963 aa7.98□□□□□ -1.13
CRNDE-204ENST00000558031 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
CRNDE-204ENST00000558031 TTBK1Q5TCY1 1321 aaPredicted RBP7.97□□□□□ -1.13
CRNDE-204ENST00000558031 ESPNB1AK53 854 aa7.96□□□□□ -1.14
CRNDE-204ENST00000558031 UPP2O95045 317 aa7.96□□□□□ -1.14
CRNDE-204ENST00000558031 CBLBQ13191 982 aa7.96□□□□□ -1.14
CRNDE-204ENST00000558031 C6orf118Q5T5N4 469 aa7.96□□□□□ -1.14
CRNDE-204ENST00000558031 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
CRNDE-204ENST00000558031 TMPRSS4Q9NRS4 437 aa7.96□□□□□ -1.14
CRNDE-204ENST00000558031 ZNF330Q9Y3S2 320 aaPredicted RBP7.96□□□□□ -1.14
CRNDE-204ENST00000558031 ERVH48-1M5A8F1 160 aa7.95□□□□□ -1.14
CRNDE-204ENST00000558031 GIGYF1O75420 1035 aaPredicted RBP7.95□□□□□ -1.14
CRNDE-204ENST00000558031 BMP2P12643 396 aa7.95□□□□□ -1.14
CRNDE-204ENST00000558031 MCM6Q14566 821 aa7.95□□□□□ -1.14
CRNDE-204ENST00000558031 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
CRNDE-204ENST00000558031 Q6ZVU0 165 aa7.94□□□□□ -1.14
CRNDE-204ENST00000558031 TSEN34Q9BSV6 310 aaKnown RBP7.94□□□□□ -1.14
CRNDE-204ENST00000558031 GDPD2Q9HCC8 539 aa7.94□□□□□ -1.14
CRNDE-204ENST00000558031 IRF5Q13568 498 aa7.93□□□□□ -1.14
CRNDE-204ENST00000558031 TMEM132AQ24JP5 1023 aa7.93□□□□□ -1.14
CRNDE-204ENST00000558031 SEPT12Q8IYM1 358 aa7.93□□□□□ -1.14
CRNDE-204ENST00000558031 ZNF784Q8NCA9 323 aaPredicted RBP7.93□□□□□ -1.14
CRNDE-204ENST00000558031 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
CRNDE-204ENST00000558031 SOBPA7XYQ1 873 aa7.91□□□□□ -1.14
CRNDE-204ENST00000558031 ABL2P42684 1182 aa7.91□□□□□ -1.14
CRNDE-204ENST00000558031 LILRA1O75019 489 aa7.9□□□□□ -1.14
CRNDE-204ENST00000558031 ADD1P35611 737 aaKnown RBP7.9□□□□□ -1.14
CRNDE-204ENST00000558031 AGBL1Q96MI9 1066 aa7.9□□□□□ -1.14
CRNDE-204ENST00000558031 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
CRNDE-204ENST00000558031 MAN1A2O60476 641 aa7.89□□□□□ -1.15
CRNDE-204ENST00000558031 RELBQ01201 579 aa7.89□□□□□ -1.15
CRNDE-204ENST00000558031 VAC14Q08AM6 782 aa7.89□□□□□ -1.15
CRNDE-204ENST00000558031 RNF20Q5VTR2 975 aa7.89□□□□□ -1.15
CRNDE-204ENST00000558031 CYLDQ9NQC7 956 aa7.89□□□□□ -1.15
CRNDE-204ENST00000558031 TERTO14746 1132 aaKnown RBP7.88□□□□□ -1.15
CRNDE-204ENST00000558031 ADH1AP07327 375 aa7.88□□□□□ -1.15
CRNDE-204ENST00000558031 EIF4G2P78344 907 aaKnown RBP eCLIP7.88□□□□□ -1.15
CRNDE-204ENST00000558031 TREML4Q6UXN2 200 aa7.88□□□□□ -1.15
CRNDE-204ENST00000558031 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
CRNDE-204ENST00000558031 COG6Q9Y2V7 657 aa7.88□□□□□ -1.15
CRNDE-204ENST00000558031 SPINT1O43278 529 aa7.87□□□□□ -1.15
CRNDE-204ENST00000558031 WFS1O76024 890 aa7.87□□□□□ -1.15
CRNDE-204ENST00000558031 NFX1Q12986 1120 aaKnown RBP7.87□□□□□ -1.15
CRNDE-204ENST00000558031 TRIM52Q96A61 297 aa7.87□□□□□ -1.15
CRNDE-204ENST00000558031 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
CRNDE-204ENST00000558031 NXF1Q9UBU9 619 aaKnown RBP7.87□□□□□ -1.15
CRNDE-204ENST00000558031 TTLL8A6PVC2 850 aa7.86□□□□□ -1.15
CRNDE-204ENST00000558031 FLIIQ13045 1269 aa7.86□□□□□ -1.15
CRNDE-204ENST00000558031 WASHC4Q2M389 1173 aa7.86□□□□□ -1.15
CRNDE-204ENST00000558031 ZNF395Q9H8N7 513 aaPredicted RBP7.86□□□□□ -1.15
CRNDE-204ENST00000558031 DNMT3LQ9UJW3 386 aa7.86□□□□□ -1.15
CRNDE-204ENST00000558031 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
CRNDE-204ENST00000558031 ERVK-9P63128 1117 aa7.85□□□□□ -1.15
CRNDE-204ENST00000558031 LCE2AQ5TA79 106 aaPredicted RBP7.85□□□□□ -1.15
CRNDE-204ENST00000558031 CC2D2BQ6DHV5 1058 aa7.85□□□□□ -1.15
CRNDE-204ENST00000558031 KDF1Q8NAX2 398 aaPredicted RBP7.85□□□□□ -1.15
CRNDE-204ENST00000558031 POM121Q96HA1 1249 aa7.85□□□□□ -1.15
CRNDE-204ENST00000558031 FIGNL2A6NMB9 653 aa7.84□□□□□ -1.15
CRNDE-204ENST00000558031 PTGIRP43119 386 aa7.84□□□□□ -1.15
CRNDE-204ENST00000558031 CTSOP43234 321 aaPredicted RBP7.84□□□□□ -1.15
CRNDE-204ENST00000558031 VEGFBP49765 207 aa7.84□□□□□ -1.15
CRNDE-204ENST00000558031 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
CRNDE-204ENST00000558031 RAD21O60216 631 aa7.83□□□□□ -1.16
CRNDE-204ENST00000558031 UBTFP17480 764 aaKnown RBP7.83□□□□□ -1.16
CRNDE-204ENST00000558031 SCTRP47872 440 aa7.83□□□□□ -1.16
CRNDE-204ENST00000558031 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.83□□□□□ -1.16
CRNDE-204ENST00000558031 CCDC85AQ96PX6 553 aaPredicted RBP7.83□□□□□ -1.16
CRNDE-204ENST00000558031 POLMQ9NP87 494 aaPredicted RBP7.83□□□□□ -1.16
CRNDE-204ENST00000558031 ATP5J2-PTCD1G3V325 749 aa7.82□□□□□ -1.16
CRNDE-204ENST00000558031 SLFNL1Q499Z3 407 aa7.82□□□□□ -1.16
CRNDE-204ENST00000558031 NPAS3Q8IXF0 933 aa7.82□□□□□ -1.16
CRNDE-204ENST00000558031 SLC16A10Q8TF71 515 aa7.82□□□□□ -1.16
CRNDE-204ENST00000558031 SEMA3FQ13275 785 aa7.81□□□□□ -1.16
CRNDE-204ENST00000558031 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms