RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 NHSL1Q5SYE7 1610 aa28.38■■■□□ 2.13
TMEM250-204ENST00000557985 ARHGEF10O15013 1369 aa28.37■■■□□ 2.13
TMEM250-204ENST00000557985 ARHGEF25Q86VW2 580 aa28.37■■■□□ 2.13
TMEM250-204ENST00000557985 LTV1Q96GA3 475 aaPredicted RBP28.37■■■□□ 2.13
TMEM250-204ENST00000557985 UBAP1LF5GYI3 381 aa28.37■■■□□ 2.13
TMEM250-204ENST00000557985 IP6K1Q92551 441 aa28.35■■■□□ 2.13
TMEM250-204ENST00000557985 NEUROD2Q15784 382 aa28.35■■■□□ 2.13
TMEM250-204ENST00000557985 PLEKHF1Q96S99 279 aa28.35■■■□□ 2.13
TMEM250-204ENST00000557985 TCP11L2Q8N4U5 519 aa28.34■■■□□ 2.13
TMEM250-204ENST00000557985 RRP7AQ9Y3A4 280 aaKnown RBP28.34■■■□□ 2.13
TMEM250-204ENST00000557985 FCHSD2O94868 740 aa28.33■■■□□ 2.13
TMEM250-204ENST00000557985 RSPH6AQ9H0K4 717 aa28.32■■■□□ 2.12
TMEM250-204ENST00000557985 KIF24Q5T7B8 1368 aa28.32■■■□□ 2.12
TMEM250-204ENST00000557985 PRKAR2BP31323 418 aa28.31■■■□□ 2.12
TMEM250-204ENST00000557985 CERKQ8TCT0 537 aa28.31■■■□□ 2.12
TMEM250-204ENST00000557985 SULT6B1Q6IMI4 303 aa28.31■■■□□ 2.12
TMEM250-204ENST00000557985 AEBP1Q8IUX7 1158 aa28.3■■■□□ 2.12
TMEM250-204ENST00000557985 AXIN2Q9Y2T1 843 aa28.3■■■□□ 2.12
TMEM250-204ENST00000557985 LRRC59Q96AG4 307 aaKnown RBP28.3■■■□□ 2.12
TMEM250-204ENST00000557985 EYA1Q99502 592 aa28.29■■■□□ 2.12
TMEM250-204ENST00000557985 PNNQ9H307 717 aaKnown RBP28.28■■■□□ 2.12
TMEM250-204ENST00000557985 PHRF1Q9P1Y6 1649 aaKnown RBP28.28■■■□□ 2.12
TMEM250-204ENST00000557985 RTL1A6NKG5 1358 aa28.28■■■□□ 2.12
TMEM250-204ENST00000557985 HAP1P54257 671 aaPredicted RBP28.28■■■□□ 2.12
TMEM250-204ENST00000557985 PHACTR3Q96KR7 559 aa28.28■■■□□ 2.12
TMEM250-204ENST00000557985 MAPK8IP3Q9UPT6 1336 aa28.27■■■□□ 2.12
TMEM250-204ENST00000557985 CHRNA2Q15822 529 aa28.27■■■□□ 2.12
TMEM250-204ENST00000557985 CDCA7LQ96GN5 454 aa28.26■■■□□ 2.11
TMEM250-204ENST00000557985 CRYBG1Q9Y4K1 1723 aa28.25■■■□□ 2.11
TMEM250-204ENST00000557985 AHDC1Q5TGY3 1603 aaPredicted RBP28.24■■■□□ 2.11
TMEM250-204ENST00000557985 RGPD5Q99666 1765 aa28.23■■■□□ 2.11
TMEM250-204ENST00000557985 KIAA0232Q92628 1395 aa28.23■■■□□ 2.11
TMEM250-204ENST00000557985 NEFMP07197 916 aa28.22■■■□□ 2.11
TMEM250-204ENST00000557985 TMPOP42166 694 aaKnown RBP28.22■■■□□ 2.11
TMEM250-204ENST00000557985 RGPD1P0DJD0 1748 aa28.21■■■□□ 2.11
TMEM250-204ENST00000557985 USHBP1Q8N6Y0 703 aa28.21■■■□□ 2.11
TMEM250-204ENST00000557985 ANKRD24Q8TF21 1146 aa28.21■■■□□ 2.11
TMEM250-204ENST00000557985 IQSEC2Q5JU85 1478 aa28.21■■■□□ 2.11
TMEM250-204ENST00000557985 PHLPP1O60346 1717 aa28.2■■■□□ 2.11
TMEM250-204ENST00000557985 NBPF6Q5VWK0 638 aa28.2■■■□□ 2.11
TMEM250-204ENST00000557985 NBPF4Q96M43 638 aa28.2■■■□□ 2.11
TMEM250-204ENST00000557985 IGSF1Q8N6C5 1336 aa28.2■■■□□ 2.11
TMEM250-204ENST00000557985 WWC1Q8IX03 1113 aa28.2■■■□□ 2.1
TMEM250-204ENST00000557985 ZNF521Q96K83 1311 aa28.2■■■□□ 2.1
TMEM250-204ENST00000557985 RIPK4P57078 832 aa28.18■■■□□ 2.1
TMEM250-204ENST00000557985 PRDM11Q9NQV5 511 aa28.17■■■□□ 2.1
TMEM250-204ENST00000557985 RGPD2P0DJD1 1756 aa28.17■■■□□ 2.1
TMEM250-204ENST00000557985 PDE3BQ13370 1112 aa28.17■■■□□ 2.1
TMEM250-204ENST00000557985 NGEFQ8N5V2 710 aa28.17■■■□□ 2.1
TMEM250-204ENST00000557985 CPDO75976 1380 aa28.16■■■□□ 2.1
TMEM250-204ENST00000557985 GOLGA2Q08379 1002 aa28.15■■■□□ 2.1
TMEM250-204ENST00000557985 COL18A1P39060 1754 aa28.15■■■□□ 2.1
TMEM250-204ENST00000557985 SPINK5Q9NQ38 1064 aaPredicted RBP28.13■■■□□ 2.09
TMEM250-204ENST00000557985 TRIM35Q9UPQ4 493 aa28.13■■■□□ 2.09
TMEM250-204ENST00000557985 ABCA3Q99758 1704 aa28.13■■■□□ 2.09
TMEM250-204ENST00000557985 NFE2L2Q16236 605 aa28.13■■■□□ 2.09
TMEM250-204ENST00000557985 PHF23Q9BUL5 403 aaPredicted RBP28.13■■■□□ 2.09
TMEM250-204ENST00000557985 COL16A1Q07092 1604 aaPredicted RBP28.13■■■□□ 2.09
TMEM250-204ENST00000557985 KDRP35968 1356 aa28.12■■■□□ 2.09
TMEM250-204ENST00000557985 FAM83GA6ND36 823 aa28.12■■■□□ 2.09
TMEM250-204ENST00000557985 ERBB3P21860 1342 aa28.12■■■□□ 2.09
TMEM250-204ENST00000557985 CCDC27Q2M243 656 aa28.11■■■□□ 2.09
TMEM250-204ENST00000557985 CSB-PGBD3P0DP91 1061 aa28.1■■■□□ 2.09
TMEM250-204ENST00000557985 NLRP2Q9NX02 1062 aa28.1■■■□□ 2.09
TMEM250-204ENST00000557985 SLFN5Q08AF3 891 aa28.08■■■□□ 2.09
TMEM250-204ENST00000557985 NCBP3Q53F19 620 aaKnown RBP28.08■■■□□ 2.09
TMEM250-204ENST00000557985 MTHFSDQ2M296 383 aaKnown RBP28.06■■■□□ 2.08
TMEM250-204ENST00000557985 NUTM2BA6NNL0 878 aaPredicted RBP28.06■■■□□ 2.08
TMEM250-204ENST00000557985 NUTM2EB1AL46 878 aaPredicted RBP28.06■■■□□ 2.08
TMEM250-204ENST00000557985 NUTM2AQ8IVF1 878 aaPredicted RBP28.06■■■□□ 2.08
TMEM250-204ENST00000557985 WDR63Q8IWG1 891 aa28.06■■■□□ 2.08
TMEM250-204ENST00000557985 CAMTA1Q9Y6Y1 1673 aa28.05■■■□□ 2.08
TMEM250-204ENST00000557985 DLG5Q8TDM6 1919 aa28.05■■■□□ 2.08
TMEM250-204ENST00000557985 THUMPD2Q9BTF0 503 aaKnown RBP28.04■■■□□ 2.08
TMEM250-204ENST00000557985 COL22A1Q8NFW1 1626 aaPredicted RBP28.04■■■□□ 2.08
TMEM250-204ENST00000557985 DUSP27Q5VZP5 1158 aa28.04■■■□□ 2.08
TMEM250-204ENST00000557985 ADAMTS2O95450 1211 aa28.03■■■□□ 2.08
TMEM250-204ENST00000557985 SUPT16HQ9Y5B9 1047 aaKnown RBP28.03■■■□□ 2.08
TMEM250-204ENST00000557985 STRN4Q9NRL3 753 aa28.02■■■□□ 2.08
TMEM250-204ENST00000557985 E9PSI1 815 aa28.02■■■□□ 2.08
TMEM250-204ENST00000557985 DCTN1Q14203 1278 aa28.02■■■□□ 2.08
TMEM250-204ENST00000557985 EVA1CP58658 441 aa28.01■■■□□ 2.07
TMEM250-204ENST00000557985 TRMT2AQ8IZ69 625 aaKnown RBP28.01■■■□□ 2.07
TMEM250-204ENST00000557985 BTG4Q9NY30 223 aa28■■■□□ 2.07
TMEM250-204ENST00000557985 ABCC6O95255 1503 aa28■■■□□ 2.07
TMEM250-204ENST00000557985 LMO7Q8WWI1 1683 aa27.99■■■□□ 2.07
TMEM250-204ENST00000557985 TOM1L2Q6ZVM7 507 aa27.98■■■□□ 2.07
TMEM250-204ENST00000557985 WDR17Q8IZU2 1322 aa27.97■■■□□ 2.07
TMEM250-204ENST00000557985 LARP1Q6PKG0 1096 aaKnown RBP27.97■■■□□ 2.07
TMEM250-204ENST00000557985 MCM10Q7L590 875 aa27.97■■■□□ 2.07
TMEM250-204ENST00000557985 GAS2L2Q8NHY3 880 aa27.97■■■□□ 2.07
TMEM250-204ENST00000557985 COL5A2P05997 1499 aaPredicted RBP27.96■■■□□ 2.07
TMEM250-204ENST00000557985 HSPA1LP34931 641 aa27.96■■■□□ 2.07
TMEM250-204ENST00000557985 LAS1LQ9Y4W2 734 aaKnown RBP27.96■■■□□ 2.07
TMEM250-204ENST00000557985 NCAPD2Q15021 1401 aa27.96■■■□□ 2.07
TMEM250-204ENST00000557985 LMOD3Q0VAK6 560 aa27.95■■■□□ 2.07
TMEM250-204ENST00000557985 TSR2Q969E8 191 aaKnown RBP27.93■■■□□ 2.06
TMEM250-204ENST00000557985 PLEKHO1Q53GL0 409 aaPredicted RBP27.93■■■□□ 2.06
TMEM250-204ENST00000557985 RAPGEF4Q8WZA2 1011 aa27.93■■■□□ 2.06
TMEM250-204ENST00000557985 JCADQ9P266 1359 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms