RNA–Protein interactions for RNA: ENST00000557813.2

CGNL1-202, Transcript of cingulin like 1, humanhuman

TSL 1 (best)

Gene CGNL1, Length 915 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1-202ENST00000557813 ESPNB1AK53 854 aa9.59□□□□□ -0.87
CGNL1-202ENST00000557813 SLFNL1Q499Z3 407 aa9.59□□□□□ -0.87
CGNL1-202ENST00000557813 NFATC2IPQ8NCF5 419 aa9.59□□□□□ -0.87
CGNL1-202ENST00000557813 ZNF592Q92610 1267 aa9.59□□□□□ -0.87
CGNL1-202ENST00000557813 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
CGNL1-202ENST00000557813 TRAF7Q6Q0C0 670 aa9.58□□□□□ -0.88
CGNL1-202ENST00000557813 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
CGNL1-202ENST00000557813 DEPDC4Q8N2C3 294 aa9.58□□□□□ -0.88
CGNL1-202ENST00000557813 ABCC9O60706 1549 aa9.57□□□□□ -0.88
CGNL1-202ENST00000557813 WNT7AO00755 349 aa9.57□□□□□ -0.88
CGNL1-202ENST00000557813 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
CGNL1-202ENST00000557813 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
CGNL1-202ENST00000557813 CDK15Q96Q40 435 aa9.57□□□□□ -0.88
CGNL1-202ENST00000557813 KCTD15Q96SI1 283 aaPredicted RBP9.57□□□□□ -0.88
CGNL1-202ENST00000557813 PRKD2Q9BZL6 878 aa9.57□□□□□ -0.88
CGNL1-202ENST00000557813 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
CGNL1-202ENST00000557813 KANK4Q5T7N3 995 aaPredicted RBP9.56□□□□□ -0.88
CGNL1-202ENST00000557813 ZNF598Q86UK7 904 aaKnown RBP9.56□□□□□ -0.88
CGNL1-202ENST00000557813 PBXIP1Q96AQ6 731 aa9.56□□□□□ -0.88
CGNL1-202ENST00000557813 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
CGNL1-202ENST00000557813 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
CGNL1-202ENST00000557813 TLL2Q9Y6L7 1015 aa9.56□□□□□ -0.88
CGNL1-202ENST00000557813 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
CGNL1-202ENST00000557813 GRM5P41594 1212 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 ARID5BQ14865 1188 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 ZNF697Q5TEC3 545 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 VASH1Q7L8A9 365 aaPredicted RBP9.55□□□□□ -0.88
CGNL1-202ENST00000557813 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 PLEKHM2Q8IWE5 1019 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
CGNL1-202ENST00000557813 NCOA4Q13772 614 aa9.54□□□□□ -0.88
CGNL1-202ENST00000557813 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
CGNL1-202ENST00000557813 MPNDQ8N594 471 aa9.54□□□□□ -0.88
CGNL1-202ENST00000557813 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
CGNL1-202ENST00000557813 RAB15P59190 212 aa9.53□□□□□ -0.88
CGNL1-202ENST00000557813 INTS6LQ5JSJ4 861 aaKnown RBP9.53□□□□□ -0.88
CGNL1-202ENST00000557813 V9GY48 417 aaPredicted RBP9.53□□□□□ -0.88
CGNL1-202ENST00000557813 FOXC1Q12948 553 aa9.52□□□□□ -0.89
CGNL1-202ENST00000557813 MAP7D1Q3KQU3 841 aa9.52□□□□□ -0.89
CGNL1-202ENST00000557813 MKRN1Q9UHC7 482 aaKnown RBP9.52□□□□□ -0.89
CGNL1-202ENST00000557813 RNF20Q5VTR2 975 aa9.51□□□□□ -0.89
CGNL1-202ENST00000557813 SEPT12Q8IYM1 358 aa9.51□□□□□ -0.89
CGNL1-202ENST00000557813 VRTNQ9H8Y1 702 aa9.51□□□□□ -0.89
CGNL1-202ENST00000557813 DOLKQ9UPQ8 538 aa9.51□□□□□ -0.89
CGNL1-202ENST00000557813 ERVH48-1M5A8F1 160 aa9.5□□□□□ -0.89
CGNL1-202ENST00000557813 GDF9O60383 454 aa9.5□□□□□ -0.89
CGNL1-202ENST00000557813 RETREG2Q8NC44 543 aa9.5□□□□□ -0.89
CGNL1-202ENST00000557813 PCDHB11Q9Y5F2 797 aa9.5□□□□□ -0.89
CGNL1-202ENST00000557813 LZTS3O60299 673 aaPredicted RBP9.49□□□□□ -0.89
CGNL1-202ENST00000557813 ATG7O95352 703 aa9.49□□□□□ -0.89
CGNL1-202ENST00000557813 NR3C2P08235 984 aa9.49□□□□□ -0.89
CGNL1-202ENST00000557813 FSHRP23945 695 aa9.49□□□□□ -0.89
CGNL1-202ENST00000557813 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
CGNL1-202ENST00000557813 TRIM67Q6ZTA4 783 aa9.49□□□□□ -0.89
CGNL1-202ENST00000557813 TMPRSS4Q9NRS4 437 aa9.49□□□□□ -0.89
CGNL1-202ENST00000557813 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
CGNL1-202ENST00000557813 ADH1CP00326 375 aa9.48□□□□□ -0.89
CGNL1-202ENST00000557813 SCTRP47872 440 aa9.48□□□□□ -0.89
CGNL1-202ENST00000557813 EML3Q32P44 896 aa9.48□□□□□ -0.89
CGNL1-202ENST00000557813 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
CGNL1-202ENST00000557813 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
CGNL1-202ENST00000557813 ZBTB7BO15156 539 aaPredicted RBP9.46□□□□□ -0.9
CGNL1-202ENST00000557813 ALDH1A1P00352 501 aa9.46□□□□□ -0.9
CGNL1-202ENST00000557813 CLDN10P78369 228 aa9.46□□□□□ -0.9
CGNL1-202ENST00000557813 ZMIZ1Q9ULJ6 1067 aa9.46□□□□□ -0.9
CGNL1-202ENST00000557813 TNFRSF10AO00220 468 aa9.45□□□□□ -0.9
CGNL1-202ENST00000557813 NR5A1Q13285 461 aa9.45□□□□□ -0.9
CGNL1-202ENST00000557813 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
CGNL1-202ENST00000557813 NOD1Q9Y239 953 aa9.45□□□□□ -0.9
CGNL1-202ENST00000557813 PCDHGA11Q9Y5H2 935 aa9.45□□□□□ -0.9
CGNL1-202ENST00000557813 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 J3QL48 77 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 DKK1O94907 266 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 RASA1P20936 1047 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 PTK7Q13308 1070 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
CGNL1-202ENST00000557813 CCDC125Q86Z20 511 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 CCDC116Q8IYX3 515 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 TOR4AQ9NXH8 423 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 KIAA1024Q9UPX6 916 aa9.44□□□□□ -0.9
CGNL1-202ENST00000557813 FAM196BA6NMK8 535 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L21D6R901 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 LILRA1O75019 489 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 ERVK-9P63128 1117 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 USP4Q13107 963 aa9.43□□□□□ -0.9
CGNL1-202ENST00000557813 OGFOD1Q8N543 542 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms