RNA–Protein interactions for RNA: ENST00000557813.2

CGNL1-202, Transcript of cingulin like 1, humanhuman

TSL 1 (best)

Gene CGNL1, Length 915 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1-202ENST00000557813 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
CGNL1-202ENST00000557813 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
CGNL1-202ENST00000557813 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
CGNL1-202ENST00000557813 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
CGNL1-202ENST00000557813 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
CGNL1-202ENST00000557813 FOXD1Q16676 465 aa18.99■□□□□ 0.63
CGNL1-202ENST00000557813 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
CGNL1-202ENST00000557813 ADRA2BP18089 450 aa18.55■□□□□ 0.56
CGNL1-202ENST00000557813 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
CGNL1-202ENST00000557813 KCNA4P22459 653 aa17.29■□□□□ 0.36
CGNL1-202ENST00000557813 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
CGNL1-202ENST00000557813 MSH5O43196 834 aa17.26■□□□□ 0.35
CGNL1-202ENST00000557813 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
CGNL1-202ENST00000557813 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
CGNL1-202ENST00000557813 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
CGNL1-202ENST00000557813 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
CGNL1-202ENST00000557813 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
CGNL1-202ENST00000557813 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
CGNL1-202ENST00000557813 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
CGNL1-202ENST00000557813 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
CGNL1-202ENST00000557813 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
CGNL1-202ENST00000557813 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
CGNL1-202ENST00000557813 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
CGNL1-202ENST00000557813 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
CGNL1-202ENST00000557813 ZBTB22O15209 634 aa15.96■□□□□ 0.15
CGNL1-202ENST00000557813 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
CGNL1-202ENST00000557813 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
CGNL1-202ENST00000557813 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
CGNL1-202ENST00000557813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.05
CGNL1-202ENST00000557813 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
CGNL1-202ENST00000557813 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
CGNL1-202ENST00000557813 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
CGNL1-202ENST00000557813 ATXN8OSP0DMR3 200 aa15.14■□□□□ 0.01
CGNL1-202ENST00000557813 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
CGNL1-202ENST00000557813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
CGNL1-202ENST00000557813 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
CGNL1-202ENST00000557813 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
CGNL1-202ENST00000557813 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
CGNL1-202ENST00000557813 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
CGNL1-202ENST00000557813 APLP2Q06481 763 aa14.72□□□□□ -0.05
CGNL1-202ENST00000557813 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
CGNL1-202ENST00000557813 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
CGNL1-202ENST00000557813 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
CGNL1-202ENST00000557813 CAPN15O75808 1086 aa14.57□□□□□ -0.08
CGNL1-202ENST00000557813 FKBP8Q14318 412 aa14.48□□□□□ -0.09
CGNL1-202ENST00000557813 POLA2Q14181 598 aa14.45□□□□□ -0.1
CGNL1-202ENST00000557813 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
CGNL1-202ENST00000557813 ABCB7O75027 752 aa14.37□□□□□ -0.11
CGNL1-202ENST00000557813 DSG3P32926 999 aa14.3□□□□□ -0.12
CGNL1-202ENST00000557813 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
CGNL1-202ENST00000557813 FBLN2P98095 1184 aa14.22□□□□□ -0.13
CGNL1-202ENST00000557813 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
CGNL1-202ENST00000557813 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
CGNL1-202ENST00000557813 PROM2Q8N271 834 aa14□□□□□ -0.17
CGNL1-202ENST00000557813 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
CGNL1-202ENST00000557813 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
CGNL1-202ENST00000557813 SPDYE2BA6NHP3 402 aa13.82□□□□□ -0.2
CGNL1-202ENST00000557813 SPDYE6P0CI01 402 aa13.82□□□□□ -0.2
CGNL1-202ENST00000557813 SPDYE2Q495Y8 402 aa13.82□□□□□ -0.2
CGNL1-202ENST00000557813 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
CGNL1-202ENST00000557813 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
CGNL1-202ENST00000557813 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
CGNL1-202ENST00000557813 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
CGNL1-202ENST00000557813 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
CGNL1-202ENST00000557813 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
CGNL1-202ENST00000557813 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
CGNL1-202ENST00000557813 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
CGNL1-202ENST00000557813 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
CGNL1-202ENST00000557813 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
CGNL1-202ENST00000557813 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
CGNL1-202ENST00000557813 MIER1Q8N108 512 aa13.37□□□□□ -0.27
CGNL1-202ENST00000557813 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
CGNL1-202ENST00000557813 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
CGNL1-202ENST00000557813 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
CGNL1-202ENST00000557813 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
CGNL1-202ENST00000557813 SPOCK2Q92563 424 aa13.27□□□□□ -0.29
CGNL1-202ENST00000557813 PKD2Q13563 968 aa13.24□□□□□ -0.29
CGNL1-202ENST00000557813 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
CGNL1-202ENST00000557813 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
CGNL1-202ENST00000557813 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
CGNL1-202ENST00000557813 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
CGNL1-202ENST00000557813 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
CGNL1-202ENST00000557813 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
CGNL1-202ENST00000557813 NUBP1P53384 320 aa13.05□□□□□ -0.32
CGNL1-202ENST00000557813 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
CGNL1-202ENST00000557813 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
CGNL1-202ENST00000557813 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
CGNL1-202ENST00000557813 RGL2O15211 777 aa12.95□□□□□ -0.34
CGNL1-202ENST00000557813 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
CGNL1-202ENST00000557813 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
CGNL1-202ENST00000557813 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
CGNL1-202ENST00000557813 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
CGNL1-202ENST00000557813 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
CGNL1-202ENST00000557813 GSE1Q14687 1217 aa12.89□□□□□ -0.35
CGNL1-202ENST00000557813 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
CGNL1-202ENST00000557813 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
CGNL1-202ENST00000557813 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
CGNL1-202ENST00000557813 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
CGNL1-202ENST00000557813 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
CGNL1-202ENST00000557813 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms