RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 LTN1O94822 1766 aa13.88□□□□□ -0.19
GABRB3-213ENST00000557765 JCADQ9P266 1359 aa13.88□□□□□ -0.19
GABRB3-213ENST00000557765 PHLPP1O60346 1717 aa13.88□□□□□ -0.19
GABRB3-213ENST00000557765 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
GABRB3-213ENST00000557765 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
GABRB3-213ENST00000557765 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
GABRB3-213ENST00000557765 NCAPD2Q15021 1401 aa13.88□□□□□ -0.19
GABRB3-213ENST00000557765 IGSF1Q8N6C5 1336 aa13.88□□□□□ -0.19
GABRB3-213ENST00000557765 MAPK8IP3Q9UPT6 1336 aa13.88□□□□□ -0.19
GABRB3-213ENST00000557765 RGPD1P0DJD0 1748 aa13.87□□□□□ -0.19
GABRB3-213ENST00000557765 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-213ENST00000557765 HNRNPUQ00839 825 aaKnown RBP eCLIP13.87□□□□□ -0.19
GABRB3-213ENST00000557765 RRS1Q15050 365 aaKnown RBP13.87□□□□□ -0.19
GABRB3-213ENST00000557765 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
GABRB3-213ENST00000557765 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
GABRB3-213ENST00000557765 PEAK1Q9H792 1746 aa13.85□□□□□ -0.19
GABRB3-213ENST00000557765 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
GABRB3-213ENST00000557765 XPCQ01831 940 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-213ENST00000557765 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
GABRB3-213ENST00000557765 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
GABRB3-213ENST00000557765 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
GABRB3-213ENST00000557765 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
GABRB3-213ENST00000557765 HSP90AB2PQ58FF8 381 aa13.84□□□□□ -0.19
GABRB3-213ENST00000557765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
GABRB3-213ENST00000557765 ERBB3P21860 1342 aa13.84□□□□□ -0.19
GABRB3-213ENST00000557765 COL14A1Q05707 1796 aaKnown RBP13.83□□□□□ -0.19
GABRB3-213ENST00000557765 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.2
GABRB3-213ENST00000557765 WDR63Q8IWG1 891 aa13.83□□□□□ -0.2
GABRB3-213ENST00000557765 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
GABRB3-213ENST00000557765 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
GABRB3-213ENST00000557765 PRDM11Q9NQV5 511 aa13.83□□□□□ -0.2
GABRB3-213ENST00000557765 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
GABRB3-213ENST00000557765 GAS2L2Q8NHY3 880 aa13.82□□□□□ -0.2
GABRB3-213ENST00000557765 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
GABRB3-213ENST00000557765 IL16Q14005 1332 aa13.82□□□□□ -0.2
GABRB3-213ENST00000557765 LMO7Q8WWI1 1683 aa13.82□□□□□ -0.2
GABRB3-213ENST00000557765 COL18A1P39060 1754 aa13.81□□□□□ -0.2
GABRB3-213ENST00000557765 KIAA0232Q92628 1395 aa13.81□□□□□ -0.2
GABRB3-213ENST00000557765 CDCA7Q9BWT1 371 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-213ENST00000557765 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
GABRB3-213ENST00000557765 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
GABRB3-213ENST00000557765 ANKRD24Q8TF21 1146 aa13.79□□□□□ -0.2
GABRB3-213ENST00000557765 DDX17Q92841 729 aaKnown RBP13.79□□□□□ -0.2
GABRB3-213ENST00000557765 EYA1Q99502 592 aa13.79□□□□□ -0.2
GABRB3-213ENST00000557765 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
GABRB3-213ENST00000557765 PIP4K2BP78356 416 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 SULT6B1Q6IMI4 303 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
GABRB3-213ENST00000557765 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
GABRB3-213ENST00000557765 E9PSI1 815 aa13.77□□□□□ -0.21
GABRB3-213ENST00000557765 APAF1O14727 1248 aa13.77□□□□□ -0.21
GABRB3-213ENST00000557765 SOX12O15370 315 aa13.77□□□□□ -0.21
GABRB3-213ENST00000557765 COL5A2P05997 1499 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-213ENST00000557765 PRKAR2BP31323 418 aa13.77□□□□□ -0.21
GABRB3-213ENST00000557765 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
GABRB3-213ENST00000557765 ZC3H6P61129 1189 aaKnown RBP13.77□□□□□ -0.21
GABRB3-213ENST00000557765 GOLGA2Q08379 1002 aa13.77□□□□□ -0.21
GABRB3-213ENST00000557765 CARD10Q9BWT7 1032 aa13.77□□□□□ -0.21
GABRB3-213ENST00000557765 CRB1P82279 1406 aa13.75□□□□□ -0.21
GABRB3-213ENST00000557765 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
GABRB3-213ENST00000557765 FBLN1P23142 703 aa13.75□□□□□ -0.21
GABRB3-213ENST00000557765 PLEKHO1Q53GL0 409 aaPredicted RBP13.75□□□□□ -0.21
GABRB3-213ENST00000557765 RAPGEF4Q8WZA2 1011 aa13.75□□□□□ -0.21
GABRB3-213ENST00000557765 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
GABRB3-213ENST00000557765 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
GABRB3-213ENST00000557765 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
GABRB3-213ENST00000557765 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
GABRB3-213ENST00000557765 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
GABRB3-213ENST00000557765 CSB-PGBD3P0DP91 1061 aa13.73□□□□□ -0.21
GABRB3-213ENST00000557765 EVA1CP58658 441 aa13.73□□□□□ -0.21
GABRB3-213ENST00000557765 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
GABRB3-213ENST00000557765 SPG7Q9UQ90 795 aa13.73□□□□□ -0.21
GABRB3-213ENST00000557765 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
GABRB3-213ENST00000557765 RIPK4P57078 832 aa13.72□□□□□ -0.21
GABRB3-213ENST00000557765 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
GABRB3-213ENST00000557765 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
GABRB3-213ENST00000557765 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
GABRB3-213ENST00000557765 SLIT2O94813 1529 aa13.72□□□□□ -0.21
GABRB3-213ENST00000557765 PARP4Q9UKK3 1724 aaKnown RBP13.71□□□□□ -0.21
GABRB3-213ENST00000557765 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
GABRB3-213ENST00000557765 HMOX1P09601 288 aa13.71□□□□□ -0.21
GABRB3-213ENST00000557765 TATP17735 454 aaPredicted RBP13.71□□□□□ -0.21
GABRB3-213ENST00000557765 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
GABRB3-213ENST00000557765 TRMT2AQ8IZ69 625 aaKnown RBP13.71□□□□□ -0.21
GABRB3-213ENST00000557765 FNBP4Q8N3X1 1017 aaPredicted RBP13.71□□□□□ -0.21
GABRB3-213ENST00000557765 PLCH1Q4KWH8 1693 aa13.71□□□□□ -0.21
GABRB3-213ENST00000557765 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
GABRB3-213ENST00000557765 GNAT3A8MTJ3 354 aa13.7□□□□□ -0.22
GABRB3-213ENST00000557765 GNAI1P63096 354 aa13.7□□□□□ -0.22
GABRB3-213ENST00000557765 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
GABRB3-213ENST00000557765 CCDC146Q8IYE0 955 aa13.7□□□□□ -0.22
GABRB3-213ENST00000557765 IFT57Q9NWB7 429 aa13.7□□□□□ -0.22
GABRB3-213ENST00000557765 NLRP2Q9NX02 1062 aa13.7□□□□□ -0.22
GABRB3-213ENST00000557765 SLFN5Q08AF3 891 aa13.69□□□□□ -0.22
GABRB3-213ENST00000557765 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms