RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 CRB1P82279 1406 aa16.65■□□□□ 0.26
CGRRF1-209ENST00000557755 GOLGB1Q14789 3259 aaKnown RBP16.65■□□□□ 0.26
CGRRF1-209ENST00000557755 AKAP12Q02952 1782 aa16.65■□□□□ 0.26
CGRRF1-209ENST00000557755 C11orf95C9JLR9 678 aaPredicted RBP16.65■□□□□ 0.26
CGRRF1-209ENST00000557755 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.26
CGRRF1-209ENST00000557755 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
CGRRF1-209ENST00000557755 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
CGRRF1-209ENST00000557755 ITSN1Q15811 1721 aa16.64■□□□□ 0.25
CGRRF1-209ENST00000557755 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
CGRRF1-209ENST00000557755 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
CGRRF1-209ENST00000557755 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
CGRRF1-209ENST00000557755 HSPA6P17066 643 aa16.62■□□□□ 0.25
CGRRF1-209ENST00000557755 ZNF827Q17R98 1081 aa16.62■□□□□ 0.25
CGRRF1-209ENST00000557755 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
CGRRF1-209ENST00000557755 USP19O94966 1318 aa16.62■□□□□ 0.25
CGRRF1-209ENST00000557755 PAPPAQ13219 1627 aa16.61■□□□□ 0.25
CGRRF1-209ENST00000557755 ACEP12821 1306 aa16.61■□□□□ 0.25
CGRRF1-209ENST00000557755 GCP02774 474 aa16.6■□□□□ 0.25
CGRRF1-209ENST00000557755 TOM1L2Q6ZVM7 507 aa16.59■□□□□ 0.25
CGRRF1-209ENST00000557755 ZNF526Q8TF50 670 aaPredicted RBP16.59■□□□□ 0.25
CGRRF1-209ENST00000557755 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.25
CGRRF1-209ENST00000557755 TOPAZ1Q8N9V7 1692 aa16.58■□□□□ 0.24
CGRRF1-209ENST00000557755 BCL9O00512 1426 aa16.57■□□□□ 0.24
CGRRF1-209ENST00000557755 POLR3AO14802 1390 aaPredicted RBP16.57■□□□□ 0.24
CGRRF1-209ENST00000557755 CAPN15O75808 1086 aa16.57■□□□□ 0.24
CGRRF1-209ENST00000557755 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
CGRRF1-209ENST00000557755 AATKQ6ZMQ8 1374 aa16.56■□□□□ 0.24
CGRRF1-209ENST00000557755 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
CGRRF1-209ENST00000557755 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
CGRRF1-209ENST00000557755 COL18A1P39060 1754 aa16.56■□□□□ 0.24
CGRRF1-209ENST00000557755 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
CGRRF1-209ENST00000557755 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
CGRRF1-209ENST00000557755 RGPD5Q99666 1765 aa16.55■□□□□ 0.24
CGRRF1-209ENST00000557755 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
CGRRF1-209ENST00000557755 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
CGRRF1-209ENST00000557755 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
CGRRF1-209ENST00000557755 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
CGRRF1-209ENST00000557755 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
CGRRF1-209ENST00000557755 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
CGRRF1-209ENST00000557755 BTAF1O14981 1849 aa16.52■□□□□ 0.24
CGRRF1-209ENST00000557755 TUBGCP6Q96RT7 1819 aa16.52■□□□□ 0.24
CGRRF1-209ENST00000557755 WDR17Q8IZU2 1322 aa16.51■□□□□ 0.23
CGRRF1-209ENST00000557755 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
CGRRF1-209ENST00000557755 POLD1P28340 1107 aa16.5■□□□□ 0.23
CGRRF1-209ENST00000557755 KCNQ4P56696 695 aa16.5■□□□□ 0.23
CGRRF1-209ENST00000557755 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
CGRRF1-209ENST00000557755 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
CGRRF1-209ENST00000557755 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
CGRRF1-209ENST00000557755 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
CGRRF1-209ENST00000557755 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
CGRRF1-209ENST00000557755 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
CGRRF1-209ENST00000557755 EXOC5O00471 708 aa16.48■□□□□ 0.23
CGRRF1-209ENST00000557755 ADCY9O60503 1353 aa16.48■□□□□ 0.23
CGRRF1-209ENST00000557755 SLIT3O75094 1523 aa16.47■□□□□ 0.23
CGRRF1-209ENST00000557755 CDCA7Q9BWT1 371 aaPredicted RBP16.47■□□□□ 0.23
CGRRF1-209ENST00000557755 QSER1Q2KHR3 1735 aa16.46■□□□□ 0.23
CGRRF1-209ENST00000557755 NLRP6P59044 892 aa16.46■□□□□ 0.23
CGRRF1-209ENST00000557755 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
CGRRF1-209ENST00000557755 USP6P35125 1406 aa16.45■□□□□ 0.22
CGRRF1-209ENST00000557755 TNS2Q63HR2 1409 aa16.45■□□□□ 0.22
CGRRF1-209ENST00000557755 SOX12O15370 315 aa16.45■□□□□ 0.22
CGRRF1-209ENST00000557755 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
CGRRF1-209ENST00000557755 BRD4O60885 1362 aaPredicted RBP16.44■□□□□ 0.22
CGRRF1-209ENST00000557755 KIF3CO14782 793 aa16.44■□□□□ 0.22
CGRRF1-209ENST00000557755 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
CGRRF1-209ENST00000557755 CARD10Q9BWT7 1032 aa16.44■□□□□ 0.22
CGRRF1-209ENST00000557755 WWC3Q9ULE0 1092 aa16.44■□□□□ 0.22
CGRRF1-209ENST00000557755 CPSF1Q10570 1443 aaKnown RBP16.43■□□□□ 0.22
CGRRF1-209ENST00000557755 MSL1Q68DK7 614 aa16.42■□□□□ 0.22
CGRRF1-209ENST00000557755 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
CGRRF1-209ENST00000557755 PPIP5K1Q6PFW1 1433 aa16.42■□□□□ 0.22
CGRRF1-209ENST00000557755 DCAF11Q8TEB1 546 aa16.41■□□□□ 0.22
CGRRF1-209ENST00000557755 TFCP2L1Q9NZI6 479 aa16.41■□□□□ 0.22
CGRRF1-209ENST00000557755 TRPM1Q7Z4N2 1603 aa16.41■□□□□ 0.22
CGRRF1-209ENST00000557755 ABCC6O95255 1503 aa16.4■□□□□ 0.22
CGRRF1-209ENST00000557755 APLP1P51693 650 aa16.39■□□□□ 0.21
CGRRF1-209ENST00000557755 HTRA3P83110 453 aa16.39■□□□□ 0.21
CGRRF1-209ENST00000557755 ARHGEF25Q86VW2 580 aa16.39■□□□□ 0.21
CGRRF1-209ENST00000557755 CABP2Q9NPB3 220 aa16.39■□□□□ 0.21
CGRRF1-209ENST00000557755 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
CGRRF1-209ENST00000557755 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
CGRRF1-209ENST00000557755 TNS4Q8IZW8 715 aa16.36■□□□□ 0.21
CGRRF1-209ENST00000557755 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
CGRRF1-209ENST00000557755 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
CGRRF1-209ENST00000557755 PRELPP51888 382 aa16.35■□□□□ 0.21
CGRRF1-209ENST00000557755 CABP1Q9NZU7 370 aa16.35■□□□□ 0.21
CGRRF1-209ENST00000557755 SLC27A3Q5K4L6 730 aa16.33■□□□□ 0.2
CGRRF1-209ENST00000557755 WDR90Q96KV7 1748 aa16.33■□□□□ 0.2
CGRRF1-209ENST00000557755 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
CGRRF1-209ENST00000557755 NFAT5O94916 1531 aa16.31■□□□□ 0.2
CGRRF1-209ENST00000557755 LY75O60449 1722 aa16.31■□□□□ 0.2
CGRRF1-209ENST00000557755 IL2RBP14784 551 aa16.3■□□□□ 0.2
CGRRF1-209ENST00000557755 DDX54Q8TDD1 881 aaKnown RBP16.29■□□□□ 0.2
CGRRF1-209ENST00000557755 SYTL4Q96C24 671 aaPredicted RBP16.29■□□□□ 0.2
CGRRF1-209ENST00000557755 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
CGRRF1-209ENST00000557755 QRICH2Q9H0J4 1663 aa16.29■□□□□ 0.2
CGRRF1-209ENST00000557755 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
CGRRF1-209ENST00000557755 KLRG1Q96E93 195 aa16.28■□□□□ 0.2
CGRRF1-209ENST00000557755 NMRK2Q9NPI5 230 aa16.28■□□□□ 0.2
CGRRF1-209ENST00000557755 TOMM70O94826 608 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms