RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
RCCD1-209ENST00000557750 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
RCCD1-209ENST00000557750 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
RCCD1-209ENST00000557750 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
RCCD1-209ENST00000557750 TRIM37O94972 964 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
RCCD1-209ENST00000557750 CAMKK2Q96RR4 588 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 TNS1Q9HBL0 1735 aaKnown RBP16.78■□□□□ 0.28
RCCD1-209ENST00000557750 PIK3C2AO00443 1686 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 ZNF316A6NFI3 1004 aaPredicted RBP16.78■□□□□ 0.28
RCCD1-209ENST00000557750 FYB1O15117 783 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 SOX12O15370 315 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 COG3Q96JB2 828 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
RCCD1-209ENST00000557750 USP19O94966 1318 aa16.77■□□□□ 0.28
RCCD1-209ENST00000557750 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
RCCD1-209ENST00000557750 GCP02774 474 aa16.76■□□□□ 0.27
RCCD1-209ENST00000557750 APBA3O96018 575 aa16.75■□□□□ 0.27
RCCD1-209ENST00000557750 USP35Q9P2H5 1018 aa16.75■□□□□ 0.27
RCCD1-209ENST00000557750 PHRF1Q9P1Y6 1649 aaKnown RBP16.75■□□□□ 0.27
RCCD1-209ENST00000557750 KCNH5Q8NCM2 988 aa16.75■□□□□ 0.27
RCCD1-209ENST00000557750 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
RCCD1-209ENST00000557750 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
RCCD1-209ENST00000557750 EVA1CP58658 441 aa16.74■□□□□ 0.27
RCCD1-209ENST00000557750 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
RCCD1-209ENST00000557750 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
RCCD1-209ENST00000557750 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
RCCD1-209ENST00000557750 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
RCCD1-209ENST00000557750 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
RCCD1-209ENST00000557750 SLIT3O75094 1523 aa16.72■□□□□ 0.27
RCCD1-209ENST00000557750 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
RCCD1-209ENST00000557750 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.27
RCCD1-209ENST00000557750 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.27
RCCD1-209ENST00000557750 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
RCCD1-209ENST00000557750 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
RCCD1-209ENST00000557750 NSD2O96028 1365 aa16.7■□□□□ 0.26
RCCD1-209ENST00000557750 CC2D1BQ5T0F9 858 aaKnown RBP16.69■□□□□ 0.26
RCCD1-209ENST00000557750 CPDO75976 1380 aa16.69■□□□□ 0.26
RCCD1-209ENST00000557750 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
RCCD1-209ENST00000557750 TNNT2P45379 298 aaPredicted RBP16.68■□□□□ 0.26
RCCD1-209ENST00000557750 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
RCCD1-209ENST00000557750 FBLN1P23142 703 aa16.67■□□□□ 0.26
RCCD1-209ENST00000557750 ARHGEF25Q86VW2 580 aa16.67■□□□□ 0.26
RCCD1-209ENST00000557750 KIF20BQ96Q89 1820 aa16.67■□□□□ 0.26
RCCD1-209ENST00000557750 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
RCCD1-209ENST00000557750 NFAT5O94916 1531 aa16.66■□□□□ 0.26
RCCD1-209ENST00000557750 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
RCCD1-209ENST00000557750 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
RCCD1-209ENST00000557750 RREB1Q92766 1687 aa16.65■□□□□ 0.26
RCCD1-209ENST00000557750 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
RCCD1-209ENST00000557750 THRAP3Q9Y2W1 955 aaKnown RBP16.65■□□□□ 0.26
RCCD1-209ENST00000557750 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
RCCD1-209ENST00000557750 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.25
RCCD1-209ENST00000557750 MAP3K19Q56UN5 1328 aa16.63■□□□□ 0.25
RCCD1-209ENST00000557750 AATKQ6ZMQ8 1374 aa16.63■□□□□ 0.25
RCCD1-209ENST00000557750 AMPHP49418 695 aa16.62■□□□□ 0.25
RCCD1-209ENST00000557750 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
RCCD1-209ENST00000557750 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
RCCD1-209ENST00000557750 AXIN2Q9Y2T1 843 aa16.61■□□□□ 0.25
RCCD1-209ENST00000557750 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
RCCD1-209ENST00000557750 CRB1P82279 1406 aa16.6■□□□□ 0.25
RCCD1-209ENST00000557750 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
RCCD1-209ENST00000557750 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
RCCD1-209ENST00000557750 YY1P25490 414 aa16.59■□□□□ 0.25
RCCD1-209ENST00000557750 HOXC9P31274 260 aa16.59■□□□□ 0.25
RCCD1-209ENST00000557750 IP6K1Q92551 441 aa16.59■□□□□ 0.25
RCCD1-209ENST00000557750 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
RCCD1-209ENST00000557750 ANKRD26Q9UPS8 1709 aa16.58■□□□□ 0.24
RCCD1-209ENST00000557750 KCNQ2O43526 872 aa16.58■□□□□ 0.24
RCCD1-209ENST00000557750 PPP1R1BQ9UD71 204 aaPredicted RBP16.58■□□□□ 0.24
RCCD1-209ENST00000557750 RTL1A6NKG5 1358 aa16.57■□□□□ 0.24
RCCD1-209ENST00000557750 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
RCCD1-209ENST00000557750 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
RCCD1-209ENST00000557750 FLT4P35916 1363 aa16.57■□□□□ 0.24
RCCD1-209ENST00000557750 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
RCCD1-209ENST00000557750 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
RCCD1-209ENST00000557750 KIF24Q5T7B8 1368 aa16.56■□□□□ 0.24
RCCD1-209ENST00000557750 DDB1Q16531 1140 aa16.56■□□□□ 0.24
RCCD1-209ENST00000557750 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
RCCD1-209ENST00000557750 PTF1AQ7RTS3 328 aa16.56■□□□□ 0.24
RCCD1-209ENST00000557750 ABCC6O95255 1503 aa16.55■□□□□ 0.24
RCCD1-209ENST00000557750 PLSCR1O15162 318 aa16.55■□□□□ 0.24
RCCD1-209ENST00000557750 TOM1L2Q6ZVM7 507 aa16.55■□□□□ 0.24
RCCD1-209ENST00000557750 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
RCCD1-209ENST00000557750 ERBB3P21860 1342 aa16.55■□□□□ 0.24
RCCD1-209ENST00000557750 LTN1O94822 1766 aa16.55■□□□□ 0.24
RCCD1-209ENST00000557750 ANO8Q9HCE9 1232 aaPredicted RBP16.54■□□□□ 0.24
RCCD1-209ENST00000557750 WDR17Q8IZU2 1322 aa16.54■□□□□ 0.24
RCCD1-209ENST00000557750 MTHFSP49914 203 aa16.53■□□□□ 0.24
RCCD1-209ENST00000557750 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
RCCD1-209ENST00000557750 LRRC37A3O60309 1634 aa16.53■□□□□ 0.24
RCCD1-209ENST00000557750 COL18A1P39060 1754 aa16.53■□□□□ 0.24
RCCD1-209ENST00000557750 INSRP06213 1382 aa16.52■□□□□ 0.24
RCCD1-209ENST00000557750 RALBP1Q15311 655 aa16.52■□□□□ 0.23
RCCD1-209ENST00000557750 MARCH10Q8NA82 808 aaPredicted RBP16.52■□□□□ 0.23
RCCD1-209ENST00000557750 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
RCCD1-209ENST00000557750 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
RCCD1-209ENST00000557750 PPP2R1AP30153 589 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms