RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 MEX3CQ5U5Q3 659 aaKnown RBP19.06■□□□□ 0.64
RIPK3-206ENST00000557624 CDK12Q9NYV4 1490 aaPredicted RBP19.06■□□□□ 0.64
RIPK3-206ENST00000557624 RTL1A6NKG5 1358 aa19.05■□□□□ 0.64
RIPK3-206ENST00000557624 RGPD5Q99666 1765 aa19.05■□□□□ 0.64
RIPK3-206ENST00000557624 COL18A1P39060 1754 aa19.04■□□□□ 0.64
RIPK3-206ENST00000557624 HSP90AB2PQ58FF8 381 aa19.04■□□□□ 0.64
RIPK3-206ENST00000557624 IP6K1Q92551 441 aa19.04■□□□□ 0.64
RIPK3-206ENST00000557624 KIF24Q5T7B8 1368 aa19.04■□□□□ 0.64
RIPK3-206ENST00000557624 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
RIPK3-206ENST00000557624 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
RIPK3-206ENST00000557624 C8orf37Q96NL8 207 aa19.03■□□□□ 0.64
RIPK3-206ENST00000557624 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
RIPK3-206ENST00000557624 LMO7Q8WWI1 1683 aa19.02■□□□□ 0.64
RIPK3-206ENST00000557624 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.64
RIPK3-206ENST00000557624 ABCC6O95255 1503 aa19.02■□□□□ 0.63
RIPK3-206ENST00000557624 PLCH1Q4KWH8 1693 aa19.02■□□□□ 0.63
RIPK3-206ENST00000557624 CCDC184Q52MB2 194 aa19.01■□□□□ 0.63
RIPK3-206ENST00000557624 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
RIPK3-206ENST00000557624 INSRP06213 1382 aa19.01■□□□□ 0.63
RIPK3-206ENST00000557624 BLMP54132 1417 aaPredicted RBP19.01■□□□□ 0.63
RIPK3-206ENST00000557624 CAMTA1Q9Y6Y1 1673 aa19.01■□□□□ 0.63
RIPK3-206ENST00000557624 MRS2Q9HD23 443 aa19■□□□□ 0.63
RIPK3-206ENST00000557624 BTG4Q9NY30 223 aa19■□□□□ 0.63
RIPK3-206ENST00000557624 COL3A1P02461 1466 aaPredicted RBP18.99■□□□□ 0.63
RIPK3-206ENST00000557624 ANKRD24Q8TF21 1146 aa18.98■□□□□ 0.63
RIPK3-206ENST00000557624 STRN4Q9NRL3 753 aa18.98■□□□□ 0.63
RIPK3-206ENST00000557624 ERBB3P21860 1342 aa18.97■□□□□ 0.63
RIPK3-206ENST00000557624 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
RIPK3-206ENST00000557624 CSB-PGBD3P0DP91 1061 aa18.97■□□□□ 0.63
RIPK3-206ENST00000557624 EIF4A2Q14240 407 aaKnown RBP18.97■□□□□ 0.63
RIPK3-206ENST00000557624 COL5A2P05997 1499 aaPredicted RBP18.97■□□□□ 0.63
RIPK3-206ENST00000557624 EVA1CP58658 441 aa18.96■□□□□ 0.63
RIPK3-206ENST00000557624 SLIT2O94813 1529 aa18.96■□□□□ 0.63
RIPK3-206ENST00000557624 NWD2Q9ULI1 1742 aa18.96■□□□□ 0.63
RIPK3-206ENST00000557624 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
RIPK3-206ENST00000557624 AFF2P51816 1311 aa18.94■□□□□ 0.62
RIPK3-206ENST00000557624 U2SURPO15042 1029 aaKnown RBP18.94■□□□□ 0.62
RIPK3-206ENST00000557624 IL13P35225 146 aa18.94■□□□□ 0.62
RIPK3-206ENST00000557624 NRAPQ86VF7 1730 aa18.94■□□□□ 0.62
RIPK3-206ENST00000557624 RGPD2P0DJD1 1756 aa18.94■□□□□ 0.62
RIPK3-206ENST00000557624 FNBP4Q8N3X1 1017 aaPredicted RBP18.93■□□□□ 0.62
RIPK3-206ENST00000557624 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
RIPK3-206ENST00000557624 LARP1Q6PKG0 1096 aaKnown RBP18.92■□□□□ 0.62
RIPK3-206ENST00000557624 NLRP2Q9NX02 1062 aa18.92■□□□□ 0.62
RIPK3-206ENST00000557624 USP21Q9UK80 565 aa18.92■□□□□ 0.62
RIPK3-206ENST00000557624 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
RIPK3-206ENST00000557624 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
RIPK3-206ENST00000557624 UNC5CLQ8IV45 518 aa18.92■□□□□ 0.62
RIPK3-206ENST00000557624 BCL9LQ86UU0 1499 aa18.92■□□□□ 0.62
RIPK3-206ENST00000557624 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
RIPK3-206ENST00000557624 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
RIPK3-206ENST00000557624 U2AF1L5P0DN76 240 aaPredicted RBP18.9■□□□□ 0.62
RIPK3-206ENST00000557624 U2AF1Q01081 240 aaKnown RBP eCLIP18.9■□□□□ 0.62
RIPK3-206ENST00000557624 NBPF6Q5VWK0 638 aa18.9■□□□□ 0.62
RIPK3-206ENST00000557624 USHBP1Q8N6Y0 703 aa18.9■□□□□ 0.62
RIPK3-206ENST00000557624 NBPF4Q96M43 638 aa18.9■□□□□ 0.62
RIPK3-206ENST00000557624 EYA1Q99502 592 aa18.9■□□□□ 0.62
RIPK3-206ENST00000557624 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.62
RIPK3-206ENST00000557624 USP35Q9P2H5 1018 aa18.89■□□□□ 0.62
RIPK3-206ENST00000557624 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.62
RIPK3-206ENST00000557624 CRB1P82279 1406 aa18.88■□□□□ 0.61
RIPK3-206ENST00000557624 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.88■□□□□ 0.61
RIPK3-206ENST00000557624 HMOX1P09601 288 aa18.88■□□□□ 0.61
RIPK3-206ENST00000557624 PNISRQ8TF01 805 aaKnown RBP18.88■□□□□ 0.61
RIPK3-206ENST00000557624 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
RIPK3-206ENST00000557624 AEBP1Q8IUX7 1158 aa18.87■□□□□ 0.61
RIPK3-206ENST00000557624 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
RIPK3-206ENST00000557624 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
RIPK3-206ENST00000557624 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
RIPK3-206ENST00000557624 VPS72Q15906 364 aa18.85■□□□□ 0.61
RIPK3-206ENST00000557624 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
RIPK3-206ENST00000557624 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
RIPK3-206ENST00000557624 SPATA31A5Q5VU36 1347 aa18.84■□□□□ 0.61
RIPK3-206ENST00000557624 SPATA31A7Q8IWB4 1347 aa18.84■□□□□ 0.61
RIPK3-206ENST00000557624 ZNF772Q68DY9 489 aaPredicted RBP18.83■□□□□ 0.61
RIPK3-206ENST00000557624 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.61
RIPK3-206ENST00000557624 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.6
RIPK3-206ENST00000557624 ATRNO75882 1429 aa18.82■□□□□ 0.6
RIPK3-206ENST00000557624 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
RIPK3-206ENST00000557624 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
RIPK3-206ENST00000557624 QTRT2Q9H974 415 aaKnown RBP18.82■□□□□ 0.6
RIPK3-206ENST00000557624 KDRP35968 1356 aa18.81■□□□□ 0.6
RIPK3-206ENST00000557624 PRKAR2BP31323 418 aa18.81■□□□□ 0.6
RIPK3-206ENST00000557624 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
RIPK3-206ENST00000557624 FCHSD2O94868 740 aa18.8■□□□□ 0.6
RIPK3-206ENST00000557624 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
RIPK3-206ENST00000557624 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
RIPK3-206ENST00000557624 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
RIPK3-206ENST00000557624 MEGF6O75095 1541 aa18.79■□□□□ 0.6
RIPK3-206ENST00000557624 IL2RBP14784 551 aa18.78■□□□□ 0.6
RIPK3-206ENST00000557624 RGS17Q9UGC6 210 aaPredicted RBP18.78■□□□□ 0.6
RIPK3-206ENST00000557624 THRAP3Q9Y2W1 955 aaKnown RBP18.78■□□□□ 0.6
RIPK3-206ENST00000557624 GLI3P10071 1580 aa18.78■□□□□ 0.6
RIPK3-206ENST00000557624 WNK3Q9BYP7 1800 aa18.77■□□□□ 0.6
RIPK3-206ENST00000557624 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.6
RIPK3-206ENST00000557624 FAM98CQ17RN3 349 aaKnown RBP18.77■□□□□ 0.6
RIPK3-206ENST00000557624 PARP4Q9UKK3 1724 aaKnown RBP18.76■□□□□ 0.59
RIPK3-206ENST00000557624 PNNQ9H307 717 aaKnown RBP18.76■□□□□ 0.59
RIPK3-206ENST00000557624 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
RIPK3-206ENST00000557624 A0A0G2JS52 829 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms