RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 CD163L1Q9NR16 1453 aa14.44□□□□□ -0.1
PRKCH-227ENST00000557599 CRB1P82279 1406 aa14.43□□□□□ -0.1
PRKCH-227ENST00000557599 RGPD5Q99666 1765 aa14.43□□□□□ -0.1
PRKCH-227ENST00000557599 ANP32CO43423 234 aa14.43□□□□□ -0.1
PRKCH-227ENST00000557599 SF3B2Q13435 895 aaKnown RBP14.43□□□□□ -0.1
PRKCH-227ENST00000557599 NUTM2GQ5VZR2 741 aa14.43□□□□□ -0.1
PRKCH-227ENST00000557599 NINLQ9Y2I6 1382 aa14.43□□□□□ -0.1
PRKCH-227ENST00000557599 FAM182BQ5T319 152 aa14.42□□□□□ -0.1
PRKCH-227ENST00000557599 LARP1Q6PKG0 1096 aaKnown RBP14.42□□□□□ -0.1
PRKCH-227ENST00000557599 NLRP13Q86W25 1043 aa14.42□□□□□ -0.1
PRKCH-227ENST00000557599 THRAP3Q9Y2W1 955 aaKnown RBP14.42□□□□□ -0.1
PRKCH-227ENST00000557599 TMC1Q8TDI8 760 aa14.41□□□□□ -0.1
PRKCH-227ENST00000557599 CABP1Q9NZU7 370 aa14.41□□□□□ -0.1
PRKCH-227ENST00000557599 BCL9O00512 1426 aa14.41□□□□□ -0.1
PRKCH-227ENST00000557599 EN1Q05925 392 aaPredicted RBP14.4□□□□□ -0.1
PRKCH-227ENST00000557599 FAM196AQ6ZSG2 479 aa14.4□□□□□ -0.1
PRKCH-227ENST00000557599 CAMKK2Q96RR4 588 aa14.4□□□□□ -0.1
PRKCH-227ENST00000557599 TCP11L2Q8N4U5 519 aa14.39□□□□□ -0.11
PRKCH-227ENST00000557599 STRN4Q9NRL3 753 aa14.39□□□□□ -0.11
PRKCH-227ENST00000557599 A0A0G2JS52 829 aa14.38□□□□□ -0.11
PRKCH-227ENST00000557599 MYT1Q01538 1121 aa14.38□□□□□ -0.11
PRKCH-227ENST00000557599 LTN1O94822 1766 aa14.37□□□□□ -0.11
PRKCH-227ENST00000557599 KNSTRNQ9Y448 316 aa14.37□□□□□ -0.11
PRKCH-227ENST00000557599 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
PRKCH-227ENST00000557599 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
PRKCH-227ENST00000557599 USP31Q70CQ4 1352 aa14.36□□□□□ -0.11
PRKCH-227ENST00000557599 OVOS2A0A0G2JMS6 1433 aa14.36□□□□□ -0.11
PRKCH-227ENST00000557599 OVOS2A0A0J9YW53 1432 aa14.36□□□□□ -0.11
PRKCH-227ENST00000557599 OVOS2Q6IE36 1432 aa14.36□□□□□ -0.11
PRKCH-227ENST00000557599 EZH2Q15910 746 aaKnown RBP14.36□□□□□ -0.11
PRKCH-227ENST00000557599 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
PRKCH-227ENST00000557599 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
PRKCH-227ENST00000557599 PANK3Q9H999 370 aa14.36□□□□□ -0.11
PRKCH-227ENST00000557599 TERF2IPQ9NYB0 399 aa14.36□□□□□ -0.11
PRKCH-227ENST00000557599 CASZ1Q86V15 1759 aa14.36□□□□□ -0.11
PRKCH-227ENST00000557599 ARHGEF25Q86VW2 580 aa14.35□□□□□ -0.11
PRKCH-227ENST00000557599 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
PRKCH-227ENST00000557599 WDR17Q8IZU2 1322 aa14.35□□□□□ -0.11
PRKCH-227ENST00000557599 TRIM37O94972 964 aa14.34□□□□□ -0.11
PRKCH-227ENST00000557599 NLRP6P59044 892 aa14.34□□□□□ -0.11
PRKCH-227ENST00000557599 MYOM1P52179 1685 aa14.33□□□□□ -0.11
PRKCH-227ENST00000557599 NHSQ6T4R5 1651 aa14.33□□□□□ -0.11
PRKCH-227ENST00000557599 PSDA5PKW4 1024 aaPredicted RBP14.33□□□□□ -0.12
PRKCH-227ENST00000557599 EVA1CP58658 441 aa14.33□□□□□ -0.12
PRKCH-227ENST00000557599 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
PRKCH-227ENST00000557599 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
PRKCH-227ENST00000557599 ANKRD36BQ8N2N9 1353 aa14.33□□□□□ -0.12
PRKCH-227ENST00000557599 FAM208AQ9UK61 1670 aaKnown RBP14.32□□□□□ -0.12
PRKCH-227ENST00000557599 PDE3BQ13370 1112 aa14.31□□□□□ -0.12
PRKCH-227ENST00000557599 SLC12A5Q9H2X9 1139 aa14.31□□□□□ -0.12
PRKCH-227ENST00000557599 TNS2Q63HR2 1409 aa14.31□□□□□ -0.12
PRKCH-227ENST00000557599 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
PRKCH-227ENST00000557599 MIER1Q8N108 512 aa14.3□□□□□ -0.12
PRKCH-227ENST00000557599 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
PRKCH-227ENST00000557599 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
PRKCH-227ENST00000557599 PAPPAQ13219 1627 aa14.3□□□□□ -0.12
PRKCH-227ENST00000557599 APBA3O96018 575 aa14.29□□□□□ -0.12
PRKCH-227ENST00000557599 RALBP1Q15311 655 aa14.29□□□□□ -0.12
PRKCH-227ENST00000557599 CGNL1Q0VF96 1302 aa14.29□□□□□ -0.12
PRKCH-227ENST00000557599 A0A1W2PP64 1363 aa14.28□□□□□ -0.12
PRKCH-227ENST00000557599 CARD10Q9BWT7 1032 aa14.28□□□□□ -0.12
PRKCH-227ENST00000557599 NSD3Q9BZ95 1437 aa14.28□□□□□ -0.12
PRKCH-227ENST00000557599 NPC1L1Q9UHC9 1359 aa14.27□□□□□ -0.12
PRKCH-227ENST00000557599 PLSCR1O15162 318 aa14.27□□□□□ -0.13
PRKCH-227ENST00000557599 CNGB1Q14028 1251 aaPredicted RBP14.27□□□□□ -0.13
PRKCH-227ENST00000557599 CDCA7Q9BWT1 371 aaPredicted RBP14.27□□□□□ -0.13
PRKCH-227ENST00000557599 SHANK3Q9BYB0 1731 aa14.27□□□□□ -0.13
PRKCH-227ENST00000557599 UTRNP46939 3433 aa14.27□□□□□ -0.13
PRKCH-227ENST00000557599 NSD2O96028 1365 aa14.26□□□□□ -0.13
PRKCH-227ENST00000557599 ERBB3P21860 1342 aa14.26□□□□□ -0.13
PRKCH-227ENST00000557599 CCER2I3L3R5 266 aa14.26□□□□□ -0.13
PRKCH-227ENST00000557599 DDB1Q16531 1140 aa14.26□□□□□ -0.13
PRKCH-227ENST00000557599 MARCH10Q8NA82 808 aaPredicted RBP14.26□□□□□ -0.13
PRKCH-227ENST00000557599 PRKRIP1Q9H875 184 aaPredicted RBP14.26□□□□□ -0.13
PRKCH-227ENST00000557599 PER1O15534 1290 aaPredicted RBP14.25□□□□□ -0.13
PRKCH-227ENST00000557599 TOM1L2Q6ZVM7 507 aa14.25□□□□□ -0.13
PRKCH-227ENST00000557599 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
PRKCH-227ENST00000557599 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
PRKCH-227ENST00000557599 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
PRKCH-227ENST00000557599 BTAF1O14981 1849 aa14.23□□□□□ -0.13
PRKCH-227ENST00000557599 PROM2Q8N271 834 aa14.23□□□□□ -0.13
PRKCH-227ENST00000557599 MYBBP1AQ9BQG0 1328 aaKnown RBP14.22□□□□□ -0.13
PRKCH-227ENST00000557599 COL24A1Q17RW2 1714 aa14.22□□□□□ -0.13
PRKCH-227ENST00000557599 QSER1Q2KHR3 1735 aa14.22□□□□□ -0.13
PRKCH-227ENST00000557599 NME9Q86XW9 330 aa14.22□□□□□ -0.13
PRKCH-227ENST00000557599 AMER1Q5JTC6 1135 aaPredicted RBP14.21□□□□□ -0.13
PRKCH-227ENST00000557599 MORC1Q86VD1 984 aa14.21□□□□□ -0.13
PRKCH-227ENST00000557599 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
PRKCH-227ENST00000557599 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
PRKCH-227ENST00000557599 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
PRKCH-227ENST00000557599 ANKRD26Q9UPS8 1709 aa14.19□□□□□ -0.14
PRKCH-227ENST00000557599 ZBTB7CA1YPR0 619 aa14.19□□□□□ -0.14
PRKCH-227ENST00000557599 KIF20BQ96Q89 1820 aa14.19□□□□□ -0.14
PRKCH-227ENST00000557599 LY75O60449 1722 aa14.18□□□□□ -0.14
PRKCH-227ENST00000557599 NBPF14Q5TI25 921 aa14.18□□□□□ -0.14
PRKCH-227ENST00000557599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.18□□□□□ -0.14
PRKCH-227ENST00000557599 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
PRKCH-227ENST00000557599 DOT1LQ8TEK3 1739 aa14.17□□□□□ -0.14
PRKCH-227ENST00000557599 SOX12O15370 315 aa14.16□□□□□ -0.14
PRKCH-227ENST00000557599 TUBGCP6Q96RT7 1819 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms