RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
TGFB3-207ENST00000557493 SPATA31A5Q5VU36 1347 aa14.32□□□□□ -0.12
TGFB3-207ENST00000557493 SPATA31A7Q8IWB4 1347 aa14.32□□□□□ -0.12
TGFB3-207ENST00000557493 POLR3AO14802 1390 aaPredicted RBP14.32□□□□□ -0.12
TGFB3-207ENST00000557493 TRIM37O94972 964 aa14.31□□□□□ -0.12
TGFB3-207ENST00000557493 FAM196AQ6ZSG2 479 aa14.31□□□□□ -0.12
TGFB3-207ENST00000557493 USP6P35125 1406 aa14.31□□□□□ -0.12
TGFB3-207ENST00000557493 APBA3O96018 575 aa14.3□□□□□ -0.12
TGFB3-207ENST00000557493 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
TGFB3-207ENST00000557493 MORC1Q86VD1 984 aa14.3□□□□□ -0.12
TGFB3-207ENST00000557493 YTHDC1Q96MU7 727 aaKnown RBP14.3□□□□□ -0.12
TGFB3-207ENST00000557493 NRAPQ86VF7 1730 aa14.29□□□□□ -0.12
TGFB3-207ENST00000557493 TNS1Q9HBL0 1735 aaKnown RBP14.29□□□□□ -0.12
TGFB3-207ENST00000557493 PPP2R1AP30153 589 aa14.29□□□□□ -0.12
TGFB3-207ENST00000557493 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
TGFB3-207ENST00000557493 ACEP12821 1306 aa14.29□□□□□ -0.12
TGFB3-207ENST00000557493 ABCA3Q99758 1704 aa14.29□□□□□ -0.12
TGFB3-207ENST00000557493 CCDC184Q52MB2 194 aa14.28□□□□□ -0.12
TGFB3-207ENST00000557493 NGDNQ8NEJ9 315 aaKnown RBP14.27□□□□□ -0.13
TGFB3-207ENST00000557493 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
TGFB3-207ENST00000557493 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
TGFB3-207ENST00000557493 FYB1O15117 783 aa14.26□□□□□ -0.13
TGFB3-207ENST00000557493 KCNQ2O43526 872 aa14.26□□□□□ -0.13
TGFB3-207ENST00000557493 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
TGFB3-207ENST00000557493 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
TGFB3-207ENST00000557493 SSH2Q76I76 1423 aa14.25□□□□□ -0.13
TGFB3-207ENST00000557493 COL14A1Q05707 1796 aaKnown RBP14.25□□□□□ -0.13
TGFB3-207ENST00000557493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.25□□□□□ -0.13
TGFB3-207ENST00000557493 GGNBP2Q9H3C7 697 aa14.25□□□□□ -0.13
TGFB3-207ENST00000557493 TTC21BQ7Z4L5 1316 aa14.24□□□□□ -0.13
TGFB3-207ENST00000557493 SENP3-EIF4A1A0A087X0R7 540 aa14.24□□□□□ -0.13
TGFB3-207ENST00000557493 IFFO2Q5TF58 517 aa14.24□□□□□ -0.13
TGFB3-207ENST00000557493 PMFBP1Q8TBY8 1022 aa14.24□□□□□ -0.13
TGFB3-207ENST00000557493 OVOS2A0A0J9YW53 1432 aa14.24□□□□□ -0.13
TGFB3-207ENST00000557493 OVOS2Q6IE36 1432 aa14.24□□□□□ -0.13
TGFB3-207ENST00000557493 INSRP06213 1382 aa14.23□□□□□ -0.13
TGFB3-207ENST00000557493 SPATA31A1Q5TZJ5 1347 aa14.23□□□□□ -0.13
TGFB3-207ENST00000557493 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
TGFB3-207ENST00000557493 ZNF784Q8NCA9 323 aaPredicted RBP14.23□□□□□ -0.13
TGFB3-207ENST00000557493 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
TGFB3-207ENST00000557493 PRDM11Q9NQV5 511 aa14.23□□□□□ -0.13
TGFB3-207ENST00000557493 PIK3C2AO00443 1686 aa14.23□□□□□ -0.13
TGFB3-207ENST00000557493 COG3Q96JB2 828 aa14.22□□□□□ -0.13
TGFB3-207ENST00000557493 PDE3BQ13370 1112 aa14.21□□□□□ -0.13
TGFB3-207ENST00000557493 NME9Q86XW9 330 aa14.21□□□□□ -0.13
TGFB3-207ENST00000557493 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
TGFB3-207ENST00000557493 TNNT2P45379 298 aaPredicted RBP14.2□□□□□ -0.14
TGFB3-207ENST00000557493 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
TGFB3-207ENST00000557493 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
TGFB3-207ENST00000557493 USP31Q70CQ4 1352 aa14.2□□□□□ -0.14
TGFB3-207ENST00000557493 RREB1Q92766 1687 aa14.2□□□□□ -0.14
TGFB3-207ENST00000557493 NUP188Q5SRE5 1749 aa14.19□□□□□ -0.14
TGFB3-207ENST00000557493 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
TGFB3-207ENST00000557493 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
TGFB3-207ENST00000557493 TRPM3Q9HCF6 1732 aaPredicted RBP14.18□□□□□ -0.14
TGFB3-207ENST00000557493 C1QTNF8P60827 252 aa14.17□□□□□ -0.14
TGFB3-207ENST00000557493 HNRNPUQ00839 825 aaKnown RBP eCLIP14.17□□□□□ -0.14
TGFB3-207ENST00000557493 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
TGFB3-207ENST00000557493 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
TGFB3-207ENST00000557493 UTRNP46939 3433 aa14.16□□□□□ -0.14
TGFB3-207ENST00000557493 MTHFSP49914 203 aa14.16□□□□□ -0.14
TGFB3-207ENST00000557493 KIAA0232Q92628 1395 aa14.16□□□□□ -0.14
TGFB3-207ENST00000557493 COL3A1P02461 1466 aaPredicted RBP14.16□□□□□ -0.14
TGFB3-207ENST00000557493 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
TGFB3-207ENST00000557493 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
TGFB3-207ENST00000557493 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
TGFB3-207ENST00000557493 CHRNA2Q15822 529 aa14.15□□□□□ -0.14
TGFB3-207ENST00000557493 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
TGFB3-207ENST00000557493 EVA1CP58658 441 aa14.14□□□□□ -0.15
TGFB3-207ENST00000557493 ZBED9Q6R2W3 1325 aa14.13□□□□□ -0.15
TGFB3-207ENST00000557493 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
TGFB3-207ENST00000557493 ABTB2Q8N961 1025 aa14.12□□□□□ -0.15
TGFB3-207ENST00000557493 NLRP6P59044 892 aa14.11□□□□□ -0.15
TGFB3-207ENST00000557493 POLKQ9UBT6 870 aa14.11□□□□□ -0.15
TGFB3-207ENST00000557493 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
TGFB3-207ENST00000557493 SLIT3O75094 1523 aa14.1□□□□□ -0.15
TGFB3-207ENST00000557493 KIF24Q5T7B8 1368 aa14.1□□□□□ -0.15
TGFB3-207ENST00000557493 ZBTB7AO95365 584 aa14.1□□□□□ -0.15
TGFB3-207ENST00000557493 ZC3H6P61129 1189 aaKnown RBP14.1□□□□□ -0.15
TGFB3-207ENST00000557493 ANO8Q9HCE9 1232 aaPredicted RBP14.1□□□□□ -0.15
TGFB3-207ENST00000557493 CRYBG1Q9Y4K1 1723 aa14.1□□□□□ -0.15
TGFB3-207ENST00000557493 PLSCR1O15162 318 aa14.09□□□□□ -0.15
TGFB3-207ENST00000557493 ADAMTS8Q9UP79 889 aa14.09□□□□□ -0.15
TGFB3-207ENST00000557493 THRAP3Q9Y2W1 955 aaKnown RBP14.09□□□□□ -0.15
TGFB3-207ENST00000557493 PEAK1Q9H792 1746 aa14.09□□□□□ -0.15
TGFB3-207ENST00000557493 NFAT5O94916 1531 aa14.09□□□□□ -0.15
TGFB3-207ENST00000557493 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
TGFB3-207ENST00000557493 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.15
TGFB3-207ENST00000557493 DIAPH1O60610 1272 aaKnown RBP14.08□□□□□ -0.16
TGFB3-207ENST00000557493 PTGER2P43116 358 aa14.08□□□□□ -0.16
TGFB3-207ENST00000557493 LARP1Q6PKG0 1096 aaKnown RBP14.08□□□□□ -0.16
TGFB3-207ENST00000557493 SYT17Q9BSW7 474 aa14.08□□□□□ -0.16
TGFB3-207ENST00000557493 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
TGFB3-207ENST00000557493 EMILIN1Q9Y6C2 1016 aa14.08□□□□□ -0.16
TGFB3-207ENST00000557493 FLT4P35916 1363 aa14.08□□□□□ -0.16
TGFB3-207ENST00000557493 OVOS2A0A0G2JMS6 1433 aa14.07□□□□□ -0.16
TGFB3-207ENST00000557493 LTN1O94822 1766 aa14.07□□□□□ -0.16
TGFB3-207ENST00000557493 PPM1GO15355 546 aaPredicted RBP14.07□□□□□ -0.16
TGFB3-207ENST00000557493 KCNH5Q8NCM2 988 aa14.07□□□□□ -0.16
TGFB3-207ENST00000557493 FHDC1Q9C0D6 1143 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms