RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 FAM98CQ17RN3 349 aaKnown RBP27.38■■□□□ 1.97
HIF1A-211ENST00000557446 A0A0G2JS52 829 aa27.37■■□□□ 1.97
HIF1A-211ENST00000557446 MYT1Q01538 1121 aa27.37■■□□□ 1.97
HIF1A-211ENST00000557446 LARP1Q6PKG0 1096 aaKnown RBP27.37■■□□□ 1.97
HIF1A-211ENST00000557446 SEPT12Q8IYM1 358 aa27.37■■□□□ 1.97
HIF1A-211ENST00000557446 ONECUT3O60422 494 aaPredicted RBP27.36■■□□□ 1.97
HIF1A-211ENST00000557446 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
HIF1A-211ENST00000557446 C11orf95C9JLR9 678 aaPredicted RBP27.35■■□□□ 1.97
HIF1A-211ENST00000557446 GGNBP2Q9H3C7 697 aa27.35■■□□□ 1.97
HIF1A-211ENST00000557446 USP35Q9P2H5 1018 aa27.35■■□□□ 1.97
HIF1A-211ENST00000557446 AXIN2Q9Y2T1 843 aa27.35■■□□□ 1.97
HIF1A-211ENST00000557446 CRB1P82279 1406 aa27.34■■□□□ 1.97
HIF1A-211ENST00000557446 FYB1O15117 783 aa27.34■■□□□ 1.97
HIF1A-211ENST00000557446 WNK3Q9BYP7 1800 aa27.33■■□□□ 1.97
HIF1A-211ENST00000557446 UPF1Q92900 1129 aaKnown RBP eCLIP27.31■■□□□ 1.96
HIF1A-211ENST00000557446 ANKRD26Q9UPS8 1709 aa27.3■■□□□ 1.96
HIF1A-211ENST00000557446 KIF7Q2M1P5 1343 aa27.3■■□□□ 1.96
HIF1A-211ENST00000557446 WDR17Q8IZU2 1322 aa27.3■■□□□ 1.96
HIF1A-211ENST00000557446 TCP11L2Q8N4U5 519 aa27.29■■□□□ 1.96
HIF1A-211ENST00000557446 TOM1L2Q6ZVM7 507 aa27.28■■□□□ 1.96
HIF1A-211ENST00000557446 CGNL1Q0VF96 1302 aa27.27■■□□□ 1.96
HIF1A-211ENST00000557446 CSB-PGBD3P0DP91 1061 aa27.27■■□□□ 1.96
HIF1A-211ENST00000557446 BARGINQ6ZT62 677 aa27.27■■□□□ 1.96
HIF1A-211ENST00000557446 PARP4Q9UKK3 1724 aaKnown RBP27.27■■□□□ 1.96
HIF1A-211ENST00000557446 KRT27Q7Z3Y8 459 aa27.26■■□□□ 1.95
HIF1A-211ENST00000557446 PANK3Q9H999 370 aa27.26■■□□□ 1.95
HIF1A-211ENST00000557446 THRAP3Q9Y2W1 955 aaKnown RBP27.26■■□□□ 1.95
HIF1A-211ENST00000557446 BLMP54132 1417 aaPredicted RBP27.25■■□□□ 1.95
HIF1A-211ENST00000557446 MAP3K19Q56UN5 1328 aa27.25■■□□□ 1.95
HIF1A-211ENST00000557446 FAM208AQ9UK61 1670 aaKnown RBP27.24■■□□□ 1.95
HIF1A-211ENST00000557446 ERBB3P21860 1342 aa27.24■■□□□ 1.95
HIF1A-211ENST00000557446 FBLN1P23142 703 aa27.24■■□□□ 1.95
HIF1A-211ENST00000557446 LRRC37A3O60309 1634 aa27.23■■□□□ 1.95
HIF1A-211ENST00000557446 PEAK1Q9H792 1746 aa27.21■■□□□ 1.95
HIF1A-211ENST00000557446 RTL1A6NKG5 1358 aa27.21■■□□□ 1.95
HIF1A-211ENST00000557446 AMPHP49418 695 aa27.2■■□□□ 1.94
HIF1A-211ENST00000557446 RRS1Q15050 365 aaKnown RBP27.2■■□□□ 1.94
HIF1A-211ENST00000557446 IP6K1Q92551 441 aa27.2■■□□□ 1.94
HIF1A-211ENST00000557446 CCDC7Q96M83 1385 aa27.2■■□□□ 1.94
HIF1A-211ENST00000557446 ANKRD24Q8TF21 1146 aa27.19■■□□□ 1.94
HIF1A-211ENST00000557446 CARD10Q9BWT7 1032 aa27.19■■□□□ 1.94
HIF1A-211ENST00000557446 HOXC9P31274 260 aa27.18■■□□□ 1.94
HIF1A-211ENST00000557446 MAP2P11137 1827 aaKnown RBP27.16■■□□□ 1.94
HIF1A-211ENST00000557446 EP400Q96L91 3159 aa27.16■■□□□ 1.94
HIF1A-211ENST00000557446 RGPD2P0DJD1 1756 aa27.16■■□□□ 1.94
HIF1A-211ENST00000557446 WASHC2AQ641Q2 1341 aa27.16■■□□□ 1.94
HIF1A-211ENST00000557446 NSD2O96028 1365 aa27.15■■□□□ 1.94
HIF1A-211ENST00000557446 NLRP2Q9NX02 1062 aa27.15■■□□□ 1.94
HIF1A-211ENST00000557446 DISP2A7MBM2 1401 aa27.15■■□□□ 1.94
HIF1A-211ENST00000557446 FAM182BQ5T319 152 aa27.14■■□□□ 1.94
HIF1A-211ENST00000557446 LTV1Q96GA3 475 aaPredicted RBP27.14■■□□□ 1.94
HIF1A-211ENST00000557446 FLT4P35916 1363 aa27.12■■□□□ 1.93
HIF1A-211ENST00000557446 KIF24Q5T7B8 1368 aa27.12■■□□□ 1.93
HIF1A-211ENST00000557446 PDE3BQ13370 1112 aa27.12■■□□□ 1.93
HIF1A-211ENST00000557446 KNSTRNQ9Y448 316 aa27.12■■□□□ 1.93
HIF1A-211ENST00000557446 RGPD1P0DJD0 1748 aa27.12■■□□□ 1.93
HIF1A-211ENST00000557446 CDCA7Q9BWT1 371 aaPredicted RBP27.11■■□□□ 1.93
HIF1A-211ENST00000557446 CCDC125Q86Z20 511 aa27.1■■□□□ 1.93
HIF1A-211ENST00000557446 EMILIN1Q9Y6C2 1016 aa27.1■■□□□ 1.93
HIF1A-211ENST00000557446 SMG6Q86US8 1419 aaKnown RBP27.09■■□□□ 1.93
HIF1A-211ENST00000557446 DDB1Q16531 1140 aa27.09■■□□□ 1.93
HIF1A-211ENST00000557446 INSRP06213 1382 aa27.09■■□□□ 1.93
HIF1A-211ENST00000557446 TNS1Q9HBL0 1735 aaKnown RBP27.08■■□□□ 1.93
HIF1A-211ENST00000557446 TNNT2P45379 298 aaPredicted RBP27.07■■□□□ 1.92
HIF1A-211ENST00000557446 TNS2Q63HR2 1409 aa27.07■■□□□ 1.92
HIF1A-211ENST00000557446 HSP90AB2PQ58FF8 381 aa27.06■■□□□ 1.92
HIF1A-211ENST00000557446 PPM1GO15355 546 aaPredicted RBP27.05■■□□□ 1.92
HIF1A-211ENST00000557446 FAM196AQ6ZSG2 479 aa27.05■■□□□ 1.92
HIF1A-211ENST00000557446 SF3B2Q13435 895 aaKnown RBP27.04■■□□□ 1.92
HIF1A-211ENST00000557446 OVOS2A0A0G2JMS6 1433 aa27.04■■□□□ 1.92
HIF1A-211ENST00000557446 IL2RBP14784 551 aa27.03■■□□□ 1.92
HIF1A-211ENST00000557446 AMER1Q5JTC6 1135 aaPredicted RBP27.03■■□□□ 1.92
HIF1A-211ENST00000557446 POLKQ9UBT6 870 aa27.03■■□□□ 1.92
HIF1A-211ENST00000557446 MORC1Q86VD1 984 aa27.02■■□□□ 1.92
HIF1A-211ENST00000557446 PER1O15534 1290 aaPredicted RBP27.01■■□□□ 1.91
HIF1A-211ENST00000557446 SBF2Q86WG5 1849 aa27.01■■□□□ 1.91
HIF1A-211ENST00000557446 EXOC5O00471 708 aa26.99■■□□□ 1.91
HIF1A-211ENST00000557446 NBPF6Q5VWK0 638 aa26.98■■□□□ 1.91
HIF1A-211ENST00000557446 NBPF4Q96M43 638 aa26.98■■□□□ 1.91
HIF1A-211ENST00000557446 MEGF6O75095 1541 aa26.97■■□□□ 1.91
HIF1A-211ENST00000557446 TRIM37O94972 964 aa26.97■■□□□ 1.91
HIF1A-211ENST00000557446 DEFB132Q7Z7B7 95 aa26.97■■□□□ 1.91
HIF1A-211ENST00000557446 MARCH10Q8NA82 808 aaPredicted RBP26.97■■□□□ 1.91
HIF1A-211ENST00000557446 USHBP1Q8N6Y0 703 aa26.96■■□□□ 1.91
HIF1A-211ENST00000557446 SHANK3Q9BYB0 1731 aa26.96■■□□□ 1.91
HIF1A-211ENST00000557446 BAG6P46379 1132 aa26.94■■□□□ 1.9
HIF1A-211ENST00000557446 CC2D1BQ5T0F9 858 aaKnown RBP26.94■■□□□ 1.9
HIF1A-211ENST00000557446 NPC1L1Q9UHC9 1359 aa26.94■■□□□ 1.9
HIF1A-211ENST00000557446 BCL9O00512 1426 aa26.92■■□□□ 1.9
HIF1A-211ENST00000557446 NCAPD2Q15021 1401 aa26.91■■□□□ 1.9
HIF1A-211ENST00000557446 ZEB1P37275 1124 aaPredicted RBP26.91■■□□□ 1.9
HIF1A-211ENST00000557446 NHSQ6T4R5 1651 aa26.89■■□□□ 1.9
HIF1A-211ENST00000557446 RAPGEF4Q8WZA2 1011 aa26.89■■□□□ 1.9
HIF1A-211ENST00000557446 CNGB1Q14028 1251 aaPredicted RBP26.88■■□□□ 1.89
HIF1A-211ENST00000557446 EIF4A2Q14240 407 aaKnown RBP26.88■■□□□ 1.89
HIF1A-211ENST00000557446 PKD1L3Q7Z443 1732 aa26.87■■□□□ 1.89
HIF1A-211ENST00000557446 APBA3O96018 575 aa26.86■■□□□ 1.89
HIF1A-211ENST00000557446 EN1Q05925 392 aaPredicted RBP26.86■■□□□ 1.89
HIF1A-211ENST00000557446 EYA1Q99502 592 aa26.86■■□□□ 1.89
HIF1A-211ENST00000557446 TATP17735 454 aaPredicted RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms