RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 ATG7O95352 703 aa9.06□□□□□ -0.96
FOXN3-215ENST00000557261 EHBP1L1Q8N3D4 1523 aa9.05□□□□□ -0.96
FOXN3-215ENST00000557261 LRRC9Q6ZRR7 1453 aa9.05□□□□□ -0.96
FOXN3-215ENST00000557261 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
FOXN3-215ENST00000557261 GCGRP47871 477 aa9.04□□□□□ -0.96
FOXN3-215ENST00000557261 ABCA8O94911 1581 aa9.03□□□□□ -0.96
FOXN3-215ENST00000557261 SLC10A3P09131 477 aa9.03□□□□□ -0.96
FOXN3-215ENST00000557261 NR6A1Q15406 480 aa9.03□□□□□ -0.96
FOXN3-215ENST00000557261 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
FOXN3-215ENST00000557261 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
FOXN3-215ENST00000557261 STK32AQ8WU08 396 aa9.02□□□□□ -0.97
FOXN3-215ENST00000557261 ZMIZ1Q9ULJ6 1067 aa9.02□□□□□ -0.97
FOXN3-215ENST00000557261 AMOTL2Q9Y2J4 779 aa9.02□□□□□ -0.97
FOXN3-215ENST00000557261 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.97
FOXN3-215ENST00000557261 ADCY10Q96PN6 1610 aa9.02□□□□□ -0.97
FOXN3-215ENST00000557261 EPRSP07814 1512 aaKnown RBP9.01□□□□□ -0.97
FOXN3-215ENST00000557261 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-215ENST00000557261 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
FOXN3-215ENST00000557261 KIAA1468Q9P260 1216 aa9.01□□□□□ -0.97
FOXN3-215ENST00000557261 SLAIN2Q9P270 581 aa9.01□□□□□ -0.97
FOXN3-215ENST00000557261 RRBP1Q9P2E9 1410 aaKnown RBP9□□□□□ -0.97
FOXN3-215ENST00000557261 TRIM6-TRIM34B2RNG4 842 aa9□□□□□ -0.97
FOXN3-215ENST00000557261 NBPF26B4DH59 902 aa9□□□□□ -0.97
FOXN3-215ENST00000557261 MTMR2Q13614 643 aa9□□□□□ -0.97
FOXN3-215ENST00000557261 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
FOXN3-215ENST00000557261 PHLDB3Q6NSJ2 640 aa9□□□□□ -0.97
FOXN3-215ENST00000557261 SEPT9Q9UHD8 586 aaPredicted RBP9□□□□□ -0.97
FOXN3-215ENST00000557261 NUP153P49790 1475 aaKnown RBP9□□□□□ -0.97
FOXN3-215ENST00000557261 NOM1Q5C9Z4 860 aaKnown RBP8.99□□□□□ -0.97
FOXN3-215ENST00000557261 TMEM164Q5U3C3 297 aa8.99□□□□□ -0.97
FOXN3-215ENST00000557261 PRG4Q92954 1404 aaPredicted RBP8.98□□□□□ -0.97
FOXN3-215ENST00000557261 BCAMP50895 628 aa8.98□□□□□ -0.97
FOXN3-215ENST00000557261 USP46P62068 366 aa8.98□□□□□ -0.97
FOXN3-215ENST00000557261 SEMA3FQ13275 785 aa8.98□□□□□ -0.97
FOXN3-215ENST00000557261 LAPTM4BQ86VI4 370 aa8.98□□□□□ -0.97
FOXN3-215ENST00000557261 HELBQ8NG08 1087 aaPredicted RBP8.98□□□□□ -0.97
FOXN3-215ENST00000557261 GNEQ9Y223 722 aaKnown RBP8.98□□□□□ -0.97
FOXN3-215ENST00000557261 USP35Q9P2H5 1018 aa8.97□□□□□ -0.97
FOXN3-215ENST00000557261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.97□□□□□ -0.97
FOXN3-215ENST00000557261 UHRF1BP1LA0JNW5 1464 aa8.96□□□□□ -0.97
FOXN3-215ENST00000557261 ABCC2Q92887 1545 aa8.96□□□□□ -0.97
FOXN3-215ENST00000557261 C6orf229H3BNL8 230 aa8.96□□□□□ -0.98
FOXN3-215ENST00000557261 ATP9BO43861 1147 aa8.96□□□□□ -0.98
FOXN3-215ENST00000557261 ZFRQ96KR1 1074 aaKnown RBP8.96□□□□□ -0.98
FOXN3-215ENST00000557261 KIAA1522Q9P206 1035 aaPredicted RBP8.96□□□□□ -0.98
FOXN3-215ENST00000557261 ITSN2Q9NZM3 1697 aa8.96□□□□□ -0.98
FOXN3-215ENST00000557261 SCNN1AP37088 669 aa8.95□□□□□ -0.98
FOXN3-215ENST00000557261 SWT1Q5T5J6 900 aaKnown RBP8.95□□□□□ -0.98
FOXN3-215ENST00000557261 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
FOXN3-215ENST00000557261 TXNDC2Q86VQ3 553 aa8.95□□□□□ -0.98
FOXN3-215ENST00000557261 MAGI3Q5TCQ9 1506 aa8.95□□□□□ -0.98
FOXN3-215ENST00000557261 SOWAHBA6NEL2 793 aa8.94□□□□□ -0.98
FOXN3-215ENST00000557261 SLF2Q8IX21 1173 aa8.94□□□□□ -0.98
FOXN3-215ENST00000557261 IGSF5Q9NSI5 407 aa8.94□□□□□ -0.98
FOXN3-215ENST00000557261 PLB1Q6P1J6 1458 aa8.94□□□□□ -0.98
FOXN3-215ENST00000557261 CDK13Q14004 1512 aaKnown RBP8.94□□□□□ -0.98
FOXN3-215ENST00000557261 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
FOXN3-215ENST00000557261 DNAJC14Q6Y2X3 702 aaPredicted RBP8.93□□□□□ -0.98
FOXN3-215ENST00000557261 DEPDC4Q8N2C3 294 aa8.93□□□□□ -0.98
FOXN3-215ENST00000557261 MTUS2Q5JR59 1369 aa8.93□□□□□ -0.98
FOXN3-215ENST00000557261 ERCC6L2Q5T890 1561 aa8.93□□□□□ -0.98
FOXN3-215ENST00000557261 KIF14Q15058 1648 aa8.92□□□□□ -0.98
FOXN3-215ENST00000557261 NCOA2Q15596 1464 aa8.92□□□□□ -0.98
FOXN3-215ENST00000557261 PTPRGP23470 1445 aa8.92□□□□□ -0.98
FOXN3-215ENST00000557261 UACAQ9BZF9 1416 aa8.92□□□□□ -0.98
FOXN3-215ENST00000557261 RBM47A0AV96 593 aaKnown RBP8.92□□□□□ -0.98
FOXN3-215ENST00000557261 SOX11P35716 441 aa8.92□□□□□ -0.98
FOXN3-215ENST00000557261 FUT2Q10981 343 aa8.92□□□□□ -0.98
FOXN3-215ENST00000557261 PCGF6Q9BYE7 350 aa8.92□□□□□ -0.98
FOXN3-215ENST00000557261 NOVA2Q9UNW9 492 aaKnown RBP8.92□□□□□ -0.98
FOXN3-215ENST00000557261 TROQ12816 1431 aaPredicted RBP8.91□□□□□ -0.98
FOXN3-215ENST00000557261 CCNB3Q8WWL7 1395 aa8.91□□□□□ -0.98
FOXN3-215ENST00000557261 FBXO45P0C2W1 286 aa8.91□□□□□ -0.98
FOXN3-215ENST00000557261 FAM174AQ8TBP5 190 aa8.91□□□□□ -0.98
FOXN3-215ENST00000557261 KDM5BQ9UGL1 1544 aa8.9□□□□□ -0.98
FOXN3-215ENST00000557261 TCOF1Q13428 1488 aaKnown RBP8.9□□□□□ -0.98
FOXN3-215ENST00000557261 MYOM3Q5VTT5 1437 aa8.9□□□□□ -0.98
FOXN3-215ENST00000557261 MIA2Q96PC5 1412 aa8.9□□□□□ -0.98
FOXN3-215ENST00000557261 CRTC2Q53ET0 693 aaPredicted RBP8.9□□□□□ -0.98
FOXN3-215ENST00000557261 IFFO2Q5TF58 517 aa8.9□□□□□ -0.98
FOXN3-215ENST00000557261 FGD6Q6ZV73 1430 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 PHLDB1Q86UU1 1377 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 A0A0G2JS52 829 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L3A6NCW0 530 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L4A6NCW7 530 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 SERPINB4P48594 390 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 ELOAQ14241 798 aaKnown RBP8.89□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L2Q6R6M4 530 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L1Q7RTZ2 530 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
FOXN3-215ENST00000557261 ZCCHC11Q5TAX3 1644 aaKnown RBP8.89□□□□□ -0.99
FOXN3-215ENST00000557261 ATP10BO94823 1461 aa8.89□□□□□ -0.99
FOXN3-215ENST00000557261 PTPN23Q9H3S7 1636 aa8.88□□□□□ -0.99
FOXN3-215ENST00000557261 CDK11AQ9UQ88 783 aaPredicted RBP8.88□□□□□ -0.99
FOXN3-215ENST00000557261 CDC42BPAQ5VT25 1732 aa8.88□□□□□ -0.99
FOXN3-215ENST00000557261 SKIP12755 728 aa8.87□□□□□ -0.99
FOXN3-215ENST00000557261 SSFA2P28290 1259 aa8.87□□□□□ -0.99
FOXN3-215ENST00000557261 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms