RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
RIPK3-205ENST00000557253 NLRP6P59044 892 aa14.05□□□□□ -0.16
RIPK3-205ENST00000557253 FHDC1Q9C0D6 1143 aaPredicted RBP14.05□□□□□ -0.16
RIPK3-205ENST00000557253 STK32BQ9NY57 414 aa14.05□□□□□ -0.16
RIPK3-205ENST00000557253 WNK3Q9BYP7 1800 aa14.05□□□□□ -0.16
RIPK3-205ENST00000557253 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
RIPK3-205ENST00000557253 TXNRD1Q16881 649 aa14.04□□□□□ -0.16
RIPK3-205ENST00000557253 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
RIPK3-205ENST00000557253 SYT17Q9BSW7 474 aa14.04□□□□□ -0.16
RIPK3-205ENST00000557253 AXIN2Q9Y2T1 843 aa14.04□□□□□ -0.16
RIPK3-205ENST00000557253 AKAP12Q02952 1782 aa14.04□□□□□ -0.16
RIPK3-205ENST00000557253 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
RIPK3-205ENST00000557253 AATKQ6ZMQ8 1374 aa14.03□□□□□ -0.16
RIPK3-205ENST00000557253 COL18A1P39060 1754 aa14.02□□□□□ -0.16
RIPK3-205ENST00000557253 SLIT3O75094 1523 aa14.02□□□□□ -0.16
RIPK3-205ENST00000557253 CABP1Q9NZU7 370 aa14.02□□□□□ -0.17
RIPK3-205ENST00000557253 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
RIPK3-205ENST00000557253 WDR17Q8IZU2 1322 aa14.01□□□□□ -0.17
RIPK3-205ENST00000557253 SOX12O15370 315 aa14.01□□□□□ -0.17
RIPK3-205ENST00000557253 USP6P35125 1406 aa14□□□□□ -0.17
RIPK3-205ENST00000557253 CSB-PGBD3P0DP91 1061 aa14□□□□□ -0.17
RIPK3-205ENST00000557253 MTFR1LQ9H019 292 aa14□□□□□ -0.17
RIPK3-205ENST00000557253 PIK3C2AO00443 1686 aa14□□□□□ -0.17
RIPK3-205ENST00000557253 KIAA1210Q9ULL0 1709 aa13.99□□□□□ -0.17
RIPK3-205ENST00000557253 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
RIPK3-205ENST00000557253 EXOC5O00471 708 aa13.99□□□□□ -0.17
RIPK3-205ENST00000557253 C1QTNF8P60827 252 aa13.99□□□□□ -0.17
RIPK3-205ENST00000557253 ACSBG1Q96GR2 724 aa13.99□□□□□ -0.17
RIPK3-205ENST00000557253 CDCA7Q9BWT1 371 aaPredicted RBP13.99□□□□□ -0.17
RIPK3-205ENST00000557253 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
RIPK3-205ENST00000557253 BCL9O00512 1426 aa13.98□□□□□ -0.17
RIPK3-205ENST00000557253 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
RIPK3-205ENST00000557253 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
RIPK3-205ENST00000557253 BRD4O60885 1362 aaPredicted RBP13.97□□□□□ -0.17
RIPK3-205ENST00000557253 ARHGEF25Q86VW2 580 aa13.97□□□□□ -0.17
RIPK3-205ENST00000557253 ARXQ96QS3 562 aa13.97□□□□□ -0.17
RIPK3-205ENST00000557253 CARD10Q9BWT7 1032 aa13.97□□□□□ -0.17
RIPK3-205ENST00000557253 CHD4Q14839 1912 aa13.97□□□□□ -0.17
RIPK3-205ENST00000557253 GPR162Q16538 588 aa13.94□□□□□ -0.18
RIPK3-205ENST00000557253 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
RIPK3-205ENST00000557253 NHSQ6T4R5 1651 aa13.94□□□□□ -0.18
RIPK3-205ENST00000557253 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
RIPK3-205ENST00000557253 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
RIPK3-205ENST00000557253 KCNH5Q8NCM2 988 aa13.93□□□□□ -0.18
RIPK3-205ENST00000557253 TNS2Q63HR2 1409 aa13.92□□□□□ -0.18
RIPK3-205ENST00000557253 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
RIPK3-205ENST00000557253 PAPPAQ13219 1627 aa13.92□□□□□ -0.18
RIPK3-205ENST00000557253 CCDC7Q96M83 1385 aa13.92□□□□□ -0.18
RIPK3-205ENST00000557253 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
RIPK3-205ENST00000557253 GIGYF1O75420 1035 aaPredicted RBP13.9□□□□□ -0.18
RIPK3-205ENST00000557253 LRRC4BQ9NT99 713 aa13.9□□□□□ -0.18
RIPK3-205ENST00000557253 BTAF1O14981 1849 aa13.9□□□□□ -0.18
RIPK3-205ENST00000557253 NFAT5O94916 1531 aa13.9□□□□□ -0.19
RIPK3-205ENST00000557253 EVC2Q86UK5 1308 aa13.9□□□□□ -0.19
RIPK3-205ENST00000557253 MAP3K5Q99683 1374 aa13.89□□□□□ -0.19
RIPK3-205ENST00000557253 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
RIPK3-205ENST00000557253 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
RIPK3-205ENST00000557253 NLRP2Q9NX02 1062 aa13.89□□□□□ -0.19
RIPK3-205ENST00000557253 ABCC6O95255 1503 aa13.88□□□□□ -0.19
RIPK3-205ENST00000557253 IL2RBP14784 551 aa13.87□□□□□ -0.19
RIPK3-205ENST00000557253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.87□□□□□ -0.19
RIPK3-205ENST00000557253 TTC21AQ8NDW8 1320 aa13.87□□□□□ -0.19
RIPK3-205ENST00000557253 POLD1P28340 1107 aa13.86□□□□□ -0.19
RIPK3-205ENST00000557253 KCNQ4P56696 695 aa13.86□□□□□ -0.19
RIPK3-205ENST00000557253 NLGN2Q8NFZ4 835 aa13.86□□□□□ -0.19
RIPK3-205ENST00000557253 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
RIPK3-205ENST00000557253 KTN1Q86UP2 1357 aaKnown RBP13.85□□□□□ -0.19
RIPK3-205ENST00000557253 GOLGB1Q14789 3259 aaKnown RBP13.85□□□□□ -0.19
RIPK3-205ENST00000557253 ERBB3P21860 1342 aa13.85□□□□□ -0.19
RIPK3-205ENST00000557253 SHANK3Q9BYB0 1731 aa13.84□□□□□ -0.19
RIPK3-205ENST00000557253 LTN1O94822 1766 aa13.84□□□□□ -0.19
RIPK3-205ENST00000557253 ANKRD24Q8TF21 1146 aa13.84□□□□□ -0.19
RIPK3-205ENST00000557253 PNPLA7Q6ZV29 1317 aa13.84□□□□□ -0.19
RIPK3-205ENST00000557253 NME9Q86XW9 330 aa13.83□□□□□ -0.2
RIPK3-205ENST00000557253 DDX54Q8TDD1 881 aaKnown RBP13.83□□□□□ -0.2
RIPK3-205ENST00000557253 SLC16A10Q8TF71 515 aa13.83□□□□□ -0.2
RIPK3-205ENST00000557253 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.2
RIPK3-205ENST00000557253 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
RIPK3-205ENST00000557253 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
RIPK3-205ENST00000557253 TUBGCP6Q96RT7 1819 aa13.82□□□□□ -0.2
RIPK3-205ENST00000557253 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
RIPK3-205ENST00000557253 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
RIPK3-205ENST00000557253 KAT6BQ8WYB5 2073 aa13.81□□□□□ -0.2
RIPK3-205ENST00000557253 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
RIPK3-205ENST00000557253 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
RIPK3-205ENST00000557253 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
RIPK3-205ENST00000557253 LTV1Q96GA3 475 aaPredicted RBP13.8□□□□□ -0.2
RIPK3-205ENST00000557253 CEP350Q5VT06 3117 aa13.79□□□□□ -0.2
RIPK3-205ENST00000557253 MSH5O43196 834 aa13.79□□□□□ -0.2
RIPK3-205ENST00000557253 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
RIPK3-205ENST00000557253 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
RIPK3-205ENST00000557253 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
RIPK3-205ENST00000557253 USP54Q70EL1 1684 aa13.78□□□□□ -0.2
RIPK3-205ENST00000557253 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
RIPK3-205ENST00000557253 TMC1Q8TDI8 760 aa13.77□□□□□ -0.21
RIPK3-205ENST00000557253 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
RIPK3-205ENST00000557253 CD163L1Q9NR16 1453 aa13.76□□□□□ -0.21
RIPK3-205ENST00000557253 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
RIPK3-205ENST00000557253 GRIN3BO60391 1043 aa13.76□□□□□ -0.21
RIPK3-205ENST00000557253 LY75O60449 1722 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms