RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ATP10DQ9P241 1426 aa18.74■□□□□ 0.59
PSEN1-220ENST00000557037 NLGN2Q8NFZ4 835 aa18.74■□□□□ 0.59
PSEN1-220ENST00000557037 TOM1L2Q6ZVM7 507 aa18.72■□□□□ 0.59
PSEN1-220ENST00000557037 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.59
PSEN1-220ENST00000557037 CAPN15O75808 1086 aa18.71■□□□□ 0.59
PSEN1-220ENST00000557037 YBX3P16989 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
PSEN1-220ENST00000557037 GPBP1L1Q9HC44 474 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-220ENST00000557037 USP19O94966 1318 aa18.71■□□□□ 0.59
PSEN1-220ENST00000557037 GCP02774 474 aa18.7■□□□□ 0.58
PSEN1-220ENST00000557037 ZNF526Q8TF50 670 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-220ENST00000557037 ACEP12821 1306 aa18.7■□□□□ 0.58
PSEN1-220ENST00000557037 ZNF827Q17R98 1081 aa18.69■□□□□ 0.58
PSEN1-220ENST00000557037 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
PSEN1-220ENST00000557037 BCL9O00512 1426 aa18.68■□□□□ 0.58
PSEN1-220ENST00000557037 POLD1P28340 1107 aa18.68■□□□□ 0.58
PSEN1-220ENST00000557037 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
PSEN1-220ENST00000557037 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
PSEN1-220ENST00000557037 GRIN3BO60391 1043 aa18.67■□□□□ 0.58
PSEN1-220ENST00000557037 ADGRB1O14514 1584 aa18.67■□□□□ 0.58
PSEN1-220ENST00000557037 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
PSEN1-220ENST00000557037 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
PSEN1-220ENST00000557037 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
PSEN1-220ENST00000557037 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
PSEN1-220ENST00000557037 CDK19Q9BWU1 502 aa18.64■□□□□ 0.57
PSEN1-220ENST00000557037 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
PSEN1-220ENST00000557037 CDCA7Q9BWT1 371 aaPredicted RBP18.63■□□□□ 0.57
PSEN1-220ENST00000557037 TOPAZ1Q8N9V7 1692 aa18.63■□□□□ 0.57
PSEN1-220ENST00000557037 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
PSEN1-220ENST00000557037 EXOC5O00471 708 aa18.62■□□□□ 0.57
PSEN1-220ENST00000557037 LRRC4BQ9NT99 713 aa18.61■□□□□ 0.57
PSEN1-220ENST00000557037 AXIN2Q9Y2T1 843 aa18.61■□□□□ 0.57
PSEN1-220ENST00000557037 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
PSEN1-220ENST00000557037 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
PSEN1-220ENST00000557037 PLEKHG3A1L390 1219 aa18.59■□□□□ 0.57
PSEN1-220ENST00000557037 COL13A1Q5TAT6 717 aaPredicted RBP18.59■□□□□ 0.57
PSEN1-220ENST00000557037 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
PSEN1-220ENST00000557037 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
PSEN1-220ENST00000557037 CSB-PGBD3P0DP91 1061 aa18.58■□□□□ 0.56
PSEN1-220ENST00000557037 AKT1S1Q96B36 256 aa18.58■□□□□ 0.56
PSEN1-220ENST00000557037 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
PSEN1-220ENST00000557037 NHSQ6T4R5 1651 aa18.57■□□□□ 0.56
PSEN1-220ENST00000557037 APLP1P51693 650 aa18.56■□□□□ 0.56
PSEN1-220ENST00000557037 NLRP6P59044 892 aa18.56■□□□□ 0.56
PSEN1-220ENST00000557037 DNAJC5GQ8N7S2 189 aa18.56■□□□□ 0.56
PSEN1-220ENST00000557037 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
PSEN1-220ENST00000557037 KDM2AQ9Y2K7 1162 aa18.56■□□□□ 0.56
PSEN1-220ENST00000557037 ADCY9O60503 1353 aa18.55■□□□□ 0.56
PSEN1-220ENST00000557037 USP6P35125 1406 aa18.55■□□□□ 0.56
PSEN1-220ENST00000557037 COL18A1P39060 1754 aa18.55■□□□□ 0.56
PSEN1-220ENST00000557037 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
PSEN1-220ENST00000557037 COL24A1Q17RW2 1714 aa18.54■□□□□ 0.56
PSEN1-220ENST00000557037 TFCP2L1Q9NZI6 479 aa18.53■□□□□ 0.56
PSEN1-220ENST00000557037 BTAF1O14981 1849 aa18.53■□□□□ 0.56
PSEN1-220ENST00000557037 ARHGEF28Q8N1W1 1705 aaKnown RBP18.52■□□□□ 0.56
PSEN1-220ENST00000557037 TNS2Q63HR2 1409 aa18.52■□□□□ 0.56
PSEN1-220ENST00000557037 KIF3CO14782 793 aa18.52■□□□□ 0.56
PSEN1-220ENST00000557037 KCNQ4P56696 695 aa18.52■□□□□ 0.56
PSEN1-220ENST00000557037 SLIT3O75094 1523 aa18.5■□□□□ 0.55
PSEN1-220ENST00000557037 SOX12O15370 315 aa18.5■□□□□ 0.55
PSEN1-220ENST00000557037 MSH5O43196 834 aa18.5■□□□□ 0.55
PSEN1-220ENST00000557037 PRELPP51888 382 aa18.5■□□□□ 0.55
PSEN1-220ENST00000557037 TNS4Q8IZW8 715 aa18.5■□□□□ 0.55
PSEN1-220ENST00000557037 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
PSEN1-220ENST00000557037 TUBGCP6Q96RT7 1819 aa18.49■□□□□ 0.55
PSEN1-220ENST00000557037 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
PSEN1-220ENST00000557037 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
PSEN1-220ENST00000557037 MSL1Q68DK7 614 aa18.48■□□□□ 0.55
PSEN1-220ENST00000557037 WWC3Q9ULE0 1092 aa18.48■□□□□ 0.55
PSEN1-220ENST00000557037 CPSF1Q10570 1443 aaKnown RBP18.48■□□□□ 0.55
PSEN1-220ENST00000557037 ARHGEF25Q86VW2 580 aa18.47■□□□□ 0.55
PSEN1-220ENST00000557037 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
PSEN1-220ENST00000557037 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
PSEN1-220ENST00000557037 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
PSEN1-220ENST00000557037 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
PSEN1-220ENST00000557037 CABP2Q9NPB3 220 aa18.44■□□□□ 0.54
PSEN1-220ENST00000557037 ABCC6O95255 1503 aa18.44■□□□□ 0.54
PSEN1-220ENST00000557037 HTRA3P83110 453 aa18.43■□□□□ 0.54
PSEN1-220ENST00000557037 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
PSEN1-220ENST00000557037 COL23A1Q86Y22 540 aaPredicted RBP18.42■□□□□ 0.54
PSEN1-220ENST00000557037 NLRP2Q9NX02 1062 aa18.41■□□□□ 0.54
PSEN1-220ENST00000557037 CD2APQ9Y5K6 639 aa18.41■□□□□ 0.54
PSEN1-220ENST00000557037 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
PSEN1-220ENST00000557037 PIK3C2AO00443 1686 aa18.4■□□□□ 0.54
PSEN1-220ENST00000557037 TOMM70O94826 608 aa18.39■□□□□ 0.53
PSEN1-220ENST00000557037 IL2RBP14784 551 aa18.39■□□□□ 0.53
PSEN1-220ENST00000557037 KLRG1Q96E93 195 aa18.39■□□□□ 0.53
PSEN1-220ENST00000557037 KCNH5Q8NCM2 988 aa18.38■□□□□ 0.53
PSEN1-220ENST00000557037 SYTL4Q96C24 671 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-220ENST00000557037 JMYQ8N9B5 988 aa18.37■□□□□ 0.53
PSEN1-220ENST00000557037 SLC34A2O95436 690 aa18.36■□□□□ 0.53
PSEN1-220ENST00000557037 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
PSEN1-220ENST00000557037 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
PSEN1-220ENST00000557037 WDR90Q96KV7 1748 aa18.36■□□□□ 0.53
PSEN1-220ENST00000557037 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
PSEN1-220ENST00000557037 PRIM1P49642 420 aaKnown RBP18.34■□□□□ 0.53
PSEN1-220ENST00000557037 NMRK2Q9NPI5 230 aa18.34■□□□□ 0.53
PSEN1-220ENST00000557037 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
PSEN1-220ENST00000557037 NFAT5O94916 1531 aa18.31■□□□□ 0.52
PSEN1-220ENST00000557037 ERBB3P21860 1342 aa18.3■□□□□ 0.52
PSEN1-220ENST00000557037 QRICH2Q9H0J4 1663 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms