RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 ZFP42Q96MM3 310 aa10.6□□□□□ -0.71
LINC00648-203ENST00000556923 CCDC116Q8IYX3 515 aa10.59□□□□□ -0.71
LINC00648-203ENST00000556923 KCTD15Q96SI1 283 aaPredicted RBP10.59□□□□□ -0.71
LINC00648-203ENST00000556923 BANK1Q8NDB2 785 aa10.58□□□□□ -0.72
LINC00648-203ENST00000556923 PURBQ96QR8 312 aaKnown RBP10.58□□□□□ -0.72
LINC00648-203ENST00000556923 CDV3Q9UKY7 258 aaKnown RBP10.58□□□□□ -0.72
LINC00648-203ENST00000556923 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
LINC00648-203ENST00000556923 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
LINC00648-203ENST00000556923 SCARF1Q14162 830 aa10.55□□□□□ -0.72
LINC00648-203ENST00000556923 INTS6LQ5JSJ4 861 aaKnown RBP10.55□□□□□ -0.72
LINC00648-203ENST00000556923 PPP1R26Q5T8A7 1209 aaPredicted RBP10.55□□□□□ -0.72
LINC00648-203ENST00000556923 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
LINC00648-203ENST00000556923 TREML4Q6UXN2 200 aa10.55□□□□□ -0.72
LINC00648-203ENST00000556923 MEIOBQ8N635 442 aa10.55□□□□□ -0.72
LINC00648-203ENST00000556923 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
LINC00648-203ENST00000556923 SOCS7O14512 581 aa10.53□□□□□ -0.72
LINC00648-203ENST00000556923 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
LINC00648-203ENST00000556923 ZBBXA8MT70 800 aa10.52□□□□□ -0.73
LINC00648-203ENST00000556923 GPR37L1O60883 481 aa10.52□□□□□ -0.73
LINC00648-203ENST00000556923 NBPF20Q3BBV1 942 aa10.52□□□□□ -0.73
LINC00648-203ENST00000556923 C6orf118Q5T5N4 469 aa10.52□□□□□ -0.73
LINC00648-203ENST00000556923 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.73
LINC00648-203ENST00000556923 LINC00528Q8N1L1 170 aa10.52□□□□□ -0.73
LINC00648-203ENST00000556923 FBXO45P0C2W1 286 aa10.51□□□□□ -0.73
LINC00648-203ENST00000556923 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
LINC00648-203ENST00000556923 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
LINC00648-203ENST00000556923 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
LINC00648-203ENST00000556923 CBLBQ13191 982 aa10.5□□□□□ -0.73
LINC00648-203ENST00000556923 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
LINC00648-203ENST00000556923 WFS1O76024 890 aa10.49□□□□□ -0.73
LINC00648-203ENST00000556923 BMP2P12643 396 aa10.49□□□□□ -0.73
LINC00648-203ENST00000556923 NDUFB9Q9Y6M9 179 aa10.49□□□□□ -0.73
LINC00648-203ENST00000556923 ESPNB1AK53 854 aa10.48□□□□□ -0.73
LINC00648-203ENST00000556923 UPP2O95045 317 aa10.48□□□□□ -0.73
LINC00648-203ENST00000556923 RAB15P59190 212 aa10.48□□□□□ -0.73
LINC00648-203ENST00000556923 Q6ZVU0 165 aa10.48□□□□□ -0.73
LINC00648-203ENST00000556923 LCE2CQ5TA81 110 aa10.47□□□□□ -0.73
LINC00648-203ENST00000556923 TSEN34Q9BSV6 310 aaKnown RBP10.47□□□□□ -0.73
LINC00648-203ENST00000556923 TMPRSS4Q9NRS4 437 aa10.47□□□□□ -0.73
LINC00648-203ENST00000556923 NXF1Q9UBU9 619 aaKnown RBP10.46□□□□□ -0.73
LINC00648-203ENST00000556923 PCDHB9Q9Y5E1 797 aa10.46□□□□□ -0.73
LINC00648-203ENST00000556923 ERVH48-1M5A8F1 160 aa10.45□□□□□ -0.74
LINC00648-203ENST00000556923 NR1H3Q13133 447 aa10.45□□□□□ -0.74
LINC00648-203ENST00000556923 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
LINC00648-203ENST00000556923 SOS2Q07890 1332 aaPredicted RBP10.44□□□□□ -0.74
LINC00648-203ENST00000556923 APBB1O00213 710 aa10.44□□□□□ -0.74
LINC00648-203ENST00000556923 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
LINC00648-203ENST00000556923 AGBL1Q96MI9 1066 aa10.43□□□□□ -0.74
LINC00648-203ENST00000556923 TBC1D2BQ9UPU7 963 aa10.43□□□□□ -0.74
LINC00648-203ENST00000556923 MAN1A2O60476 641 aa10.42□□□□□ -0.74
LINC00648-203ENST00000556923 LILRA1O75019 489 aa10.42□□□□□ -0.74
LINC00648-203ENST00000556923 VEGFBP49765 207 aa10.42□□□□□ -0.74
LINC00648-203ENST00000556923 SEPT12Q8IYM1 358 aa10.42□□□□□ -0.74
LINC00648-203ENST00000556923 DNMT3LQ9UJW3 386 aa10.42□□□□□ -0.74
LINC00648-203ENST00000556923 SPINT1O43278 529 aa10.4□□□□□ -0.74
LINC00648-203ENST00000556923 RELBQ01201 579 aa10.4□□□□□ -0.74
LINC00648-203ENST00000556923 NPAS3Q8IXF0 933 aa10.4□□□□□ -0.74
LINC00648-203ENST00000556923 H3BM21 787 aa10.39□□□□□ -0.75
LINC00648-203ENST00000556923 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
LINC00648-203ENST00000556923 TTLL8A6PVC2 850 aa10.38□□□□□ -0.75
LINC00648-203ENST00000556923 SLC16A10Q8TF71 515 aa10.38□□□□□ -0.75
LINC00648-203ENST00000556923 CYLDQ9NQC7 956 aa10.38□□□□□ -0.75
LINC00648-203ENST00000556923 ADH1AP07327 375 aa10.37□□□□□ -0.75
LINC00648-203ENST00000556923 KDF1Q8NAX2 398 aaPredicted RBP10.37□□□□□ -0.75
LINC00648-203ENST00000556923 ZNF330Q9Y3S2 320 aaPredicted RBP10.37□□□□□ -0.75
LINC00648-203ENST00000556923 WIPF1O43516 503 aa10.36□□□□□ -0.75
LINC00648-203ENST00000556923 MCCD1P59942 119 aaPredicted RBP10.36□□□□□ -0.75
LINC00648-203ENST00000556923 IRF5Q13568 498 aa10.36□□□□□ -0.75
LINC00648-203ENST00000556923 INSM2Q96T92 566 aaPredicted RBP10.36□□□□□ -0.75
LINC00648-203ENST00000556923 ZNF395Q9H8N7 513 aaPredicted RBP10.36□□□□□ -0.75
LINC00648-203ENST00000556923 FIGNL2A6NMB9 653 aa10.35□□□□□ -0.75
LINC00648-203ENST00000556923 CTSOP43234 321 aaPredicted RBP10.35□□□□□ -0.75
LINC00648-203ENST00000556923 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
LINC00648-203ENST00000556923 MCM6Q14566 821 aa10.34□□□□□ -0.75
LINC00648-203ENST00000556923 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.34□□□□□ -0.75
LINC00648-203ENST00000556923 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
LINC00648-203ENST00000556923 IRF7Q92985 503 aa10.34□□□□□ -0.75
LINC00648-203ENST00000556923 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
LINC00648-203ENST00000556923 RNF20Q5VTR2 975 aa10.33□□□□□ -0.76
LINC00648-203ENST00000556923 GDPD2Q9HCC8 539 aa10.33□□□□□ -0.76
LINC00648-203ENST00000556923 PTGIRP43119 386 aa10.32□□□□□ -0.76
LINC00648-203ENST00000556923 ERVK-9P63128 1117 aa10.32□□□□□ -0.76
LINC00648-203ENST00000556923 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
LINC00648-203ENST00000556923 POLMQ9NP87 494 aaPredicted RBP10.32□□□□□ -0.76
LINC00648-203ENST00000556923 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
LINC00648-203ENST00000556923 GMPRP36959 345 aa10.31□□□□□ -0.76
LINC00648-203ENST00000556923 RNF217Q8TC41 542 aa10.31□□□□□ -0.76
LINC00648-203ENST00000556923 SCTRP47872 440 aa10.3□□□□□ -0.76
LINC00648-203ENST00000556923 PTSQ03393 145 aa10.3□□□□□ -0.76
LINC00648-203ENST00000556923 FOXD4L5Q5VV16 416 aaPredicted RBP10.3□□□□□ -0.76
LINC00648-203ENST00000556923 CC2D2BQ6DHV5 1058 aa10.3□□□□□ -0.76
LINC00648-203ENST00000556923 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
LINC00648-203ENST00000556923 PCDHB11Q9Y5F2 797 aa10.3□□□□□ -0.76
LINC00648-203ENST00000556923 ABL2P42684 1182 aa10.29□□□□□ -0.76
LINC00648-203ENST00000556923 VAC14Q08AM6 782 aa10.29□□□□□ -0.76
LINC00648-203ENST00000556923 TRIM52Q96A61 297 aa10.29□□□□□ -0.76
LINC00648-203ENST00000556923 ATP5J2-PTCD1G3V325 749 aa10.28□□□□□ -0.76
LINC00648-203ENST00000556923 VSIG8P0DPA2 414 aa10.28□□□□□ -0.76
LINC00648-203ENST00000556923 EIF4G2P78344 907 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC00648-203ENST00000556923 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms