RNA–Protein interactions for RNA: ENST00000556882.1

NEMF-212, Transcript of nuclear export mediator factor, humanhuman

TSL 2

Gene NEMF, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-212ENST00000556882 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
NEMF-212ENST00000556882 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
NEMF-212ENST00000556882 SNRPBP14678 240 aaKnown RBP12.28□□□□□ -0.44
NEMF-212ENST00000556882 MTMR14Q8NCE2 650 aa12.28□□□□□ -0.44
NEMF-212ENST00000556882 TRIM47Q96LD4 638 aa12.26□□□□□ -0.45
NEMF-212ENST00000556882 SENP2Q9HC62 589 aa12.26□□□□□ -0.45
NEMF-212ENST00000556882 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
NEMF-212ENST00000556882 CCDC116Q8IYX3 515 aa12.24□□□□□ -0.45
NEMF-212ENST00000556882 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
NEMF-212ENST00000556882 CDV3Q9UKY7 258 aaKnown RBP12.23□□□□□ -0.45
NEMF-212ENST00000556882 DZIP3Q86Y13 1208 aaKnown RBP12.22□□□□□ -0.45
NEMF-212ENST00000556882 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
NEMF-212ENST00000556882 ZFP42Q96MM3 310 aa12.22□□□□□ -0.45
NEMF-212ENST00000556882 PPP1R26Q5T8A7 1209 aaPredicted RBP12.21□□□□□ -0.45
NEMF-212ENST00000556882 PURBQ96QR8 312 aaKnown RBP12.21□□□□□ -0.45
NEMF-212ENST00000556882 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
NEMF-212ENST00000556882 GPR37L1O60883 481 aa12.2□□□□□ -0.46
NEMF-212ENST00000556882 FBXO45P0C2W1 286 aa12.2□□□□□ -0.46
NEMF-212ENST00000556882 INTS6LQ5JSJ4 861 aaKnown RBP12.2□□□□□ -0.46
NEMF-212ENST00000556882 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
NEMF-212ENST00000556882 RAB15P59190 212 aa12.19□□□□□ -0.46
NEMF-212ENST00000556882 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
NEMF-212ENST00000556882 SOCS7O14512 581 aa12.18□□□□□ -0.46
NEMF-212ENST00000556882 SCARF1Q14162 830 aa12.17□□□□□ -0.46
NEMF-212ENST00000556882 NBPF20Q3BBV1 942 aa12.17□□□□□ -0.46
NEMF-212ENST00000556882 C6orf118Q5T5N4 469 aa12.17□□□□□ -0.46
NEMF-212ENST00000556882 MEIOBQ8N635 442 aa12.16□□□□□ -0.46
NEMF-212ENST00000556882 ARXQ96QS3 562 aa12.16□□□□□ -0.46
NEMF-212ENST00000556882 PCDHB9Q9Y5E1 797 aa12.16□□□□□ -0.46
NEMF-212ENST00000556882 CBLBQ13191 982 aa12.15□□□□□ -0.46
NEMF-212ENST00000556882 TMPRSS4Q9NRS4 437 aa12.15□□□□□ -0.46
NEMF-212ENST00000556882 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
NEMF-212ENST00000556882 APBB1O00213 710 aa12.14□□□□□ -0.47
NEMF-212ENST00000556882 LINC00528Q8N1L1 170 aa12.14□□□□□ -0.47
NEMF-212ENST00000556882 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
NEMF-212ENST00000556882 DHX9Q08211 1270 aaKnown RBP12.13□□□□□ -0.47
NEMF-212ENST00000556882 NR1H3Q13133 447 aa12.13□□□□□ -0.47
NEMF-212ENST00000556882 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
NEMF-212ENST00000556882 ESPNB1AK53 854 aa12.12□□□□□ -0.47
NEMF-212ENST00000556882 BMP2P12643 396 aa12.12□□□□□ -0.47
NEMF-212ENST00000556882 ERVH48-1M5A8F1 160 aa12.11□□□□□ -0.47
NEMF-212ENST00000556882 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
NEMF-212ENST00000556882 UPP2O95045 317 aa12.1□□□□□ -0.47
NEMF-212ENST00000556882 Q6ZVU0 165 aa12.09□□□□□ -0.47
NEMF-212ENST00000556882 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
NEMF-212ENST00000556882 TREML4Q6UXN2 200 aa12.08□□□□□ -0.48
NEMF-212ENST00000556882 TSEN34Q9BSV6 310 aaKnown RBP12.08□□□□□ -0.48
NEMF-212ENST00000556882 NFX1Q12986 1120 aaKnown RBP12.07□□□□□ -0.48
NEMF-212ENST00000556882 AGBL1Q96MI9 1066 aa12.07□□□□□ -0.48
NEMF-212ENST00000556882 MCM6Q14566 821 aa12.06□□□□□ -0.48
NEMF-212ENST00000556882 LCE2AQ5TA79 106 aaPredicted RBP12.06□□□□□ -0.48
NEMF-212ENST00000556882 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
NEMF-212ENST00000556882 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
NEMF-212ENST00000556882 IRF5Q13568 498 aa12.05□□□□□ -0.48
NEMF-212ENST00000556882 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
NEMF-212ENST00000556882 LILRA1O75019 489 aa12.04□□□□□ -0.48
NEMF-212ENST00000556882 WFS1O76024 890 aa12.04□□□□□ -0.48
NEMF-212ENST00000556882 ADD1P35611 737 aaKnown RBP12.04□□□□□ -0.48
NEMF-212ENST00000556882 RELBQ01201 579 aa12.04□□□□□ -0.48
NEMF-212ENST00000556882 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
NEMF-212ENST00000556882 CYLDQ9NQC7 956 aa12.04□□□□□ -0.48
NEMF-212ENST00000556882 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
NEMF-212ENST00000556882 SOS2Q07890 1332 aaPredicted RBP12.04□□□□□ -0.48
NEMF-212ENST00000556882 MAN1A2O60476 641 aa12.03□□□□□ -0.48
NEMF-212ENST00000556882 ABL2P42684 1182 aa12.02□□□□□ -0.49
NEMF-212ENST00000556882 VEGFBP49765 207 aa12.02□□□□□ -0.49
NEMF-212ENST00000556882 NXF1Q9UBU9 619 aaKnown RBP12.02□□□□□ -0.49
NEMF-212ENST00000556882 LCE2CQ5TA81 110 aa12.01□□□□□ -0.49
NEMF-212ENST00000556882 ZNF395Q9H8N7 513 aaPredicted RBP12.01□□□□□ -0.49
NEMF-212ENST00000556882 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
NEMF-212ENST00000556882 SPINT1O43278 529 aa12□□□□□ -0.49
NEMF-212ENST00000556882 MCCD1P59942 119 aaPredicted RBP12□□□□□ -0.49
NEMF-212ENST00000556882 FIGNL2A6NMB9 653 aa11.99□□□□□ -0.49
NEMF-212ENST00000556882 TTLL8A6PVC2 850 aa11.99□□□□□ -0.49
NEMF-212ENST00000556882 ADH1AP07327 375 aa11.99□□□□□ -0.49
NEMF-212ENST00000556882 VAC14Q08AM6 782 aa11.99□□□□□ -0.49
NEMF-212ENST00000556882 KDF1Q8NAX2 398 aaPredicted RBP11.99□□□□□ -0.49
NEMF-212ENST00000556882 ZNF592Q92610 1267 aa11.98□□□□□ -0.49
NEMF-212ENST00000556882 INSM2Q96T92 566 aaPredicted RBP11.98□□□□□ -0.49
NEMF-212ENST00000556882 CTSOP43234 321 aaPredicted RBP11.97□□□□□ -0.49
NEMF-212ENST00000556882 RNF20Q5VTR2 975 aa11.97□□□□□ -0.49
NEMF-212ENST00000556882 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
NEMF-212ENST00000556882 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
NEMF-212ENST00000556882 PCDHB11Q9Y5F2 797 aa11.97□□□□□ -0.49
NEMF-212ENST00000556882 SCTRP47872 440 aa11.95□□□□□ -0.5
NEMF-212ENST00000556882 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
NEMF-212ENST00000556882 SUPT5HO00267 1087 aaKnown RBP11.94□□□□□ -0.5
NEMF-212ENST00000556882 PTGIRP43119 386 aa11.94□□□□□ -0.5
NEMF-212ENST00000556882 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
NEMF-212ENST00000556882 POLMQ9NP87 494 aaPredicted RBP11.94□□□□□ -0.5
NEMF-212ENST00000556882 H3BM21 787 aa11.93□□□□□ -0.5
NEMF-212ENST00000556882 ERVK-9P63128 1117 aa11.93□□□□□ -0.5
NEMF-212ENST00000556882 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
NEMF-212ENST00000556882 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
NEMF-212ENST00000556882 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
NEMF-212ENST00000556882 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.92□□□□□ -0.54e-6■■□□□ 13.3
NEMF-212ENST00000556882 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
NEMF-212ENST00000556882 NPAS3Q8IXF0 933 aa11.92□□□□□ -0.5
NEMF-212ENST00000556882 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
NEMF-212ENST00000556882 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms