RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
LINC00871-203ENST00000556869 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
LINC00871-203ENST00000556869 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
LINC00871-203ENST00000556869 PPP1R26Q5T8A7 1209 aaPredicted RBP8.45□□□□□ -1.06
LINC00871-203ENST00000556869 KCTD17Q8N5Z5 321 aa8.45□□□□□ -1.06
LINC00871-203ENST00000556869 CLK2P49760 499 aaKnown RBP8.44□□□□□ -1.06
LINC00871-203ENST00000556869 GSK3AP49840 483 aa8.44□□□□□ -1.06
LINC00871-203ENST00000556869 COL25A1Q9BXS0 654 aaPredicted RBP8.43□□□□□ -1.06
LINC00871-203ENST00000556869 POLR3EQ9NVU0 708 aa8.43□□□□□ -1.06
LINC00871-203ENST00000556869 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
LINC00871-203ENST00000556869 CCDC155Q8N6L0 562 aa8.42□□□□□ -1.06
LINC00871-203ENST00000556869 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
LINC00871-203ENST00000556869 ARHGAP9Q9BRR9 750 aa8.42□□□□□ -1.06
LINC00871-203ENST00000556869 SPINT1O43278 529 aa8.41□□□□□ -1.06
LINC00871-203ENST00000556869 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
LINC00871-203ENST00000556869 Q6ZVU0 165 aa8.41□□□□□ -1.06
LINC00871-203ENST00000556869 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
LINC00871-203ENST00000556869 RNFT1Q5M7Z0 435 aa8.4□□□□□ -1.06
LINC00871-203ENST00000556869 AGBL1Q96MI9 1066 aa8.4□□□□□ -1.06
LINC00871-203ENST00000556869 KCTD15Q96SI1 283 aaPredicted RBP8.4□□□□□ -1.06
LINC00871-203ENST00000556869 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
LINC00871-203ENST00000556869 GDF11O95390 407 aa8.39□□□□□ -1.07
LINC00871-203ENST00000556869 RELBQ01201 579 aa8.39□□□□□ -1.07
LINC00871-203ENST00000556869 RASSF7Q02833 373 aa8.39□□□□□ -1.07
LINC00871-203ENST00000556869 TMEM151AQ8N4L1 468 aa8.39□□□□□ -1.07
LINC00871-203ENST00000556869 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
LINC00871-203ENST00000556869 CDC14CA4D256 554 aa8.38□□□□□ -1.07
LINC00871-203ENST00000556869 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
LINC00871-203ENST00000556869 ZNF385CQ66K41 422 aaPredicted RBP8.38□□□□□ -1.07
LINC00871-203ENST00000556869 PDXDC2PQ6P474 469 aa8.38□□□□□ -1.07
LINC00871-203ENST00000556869 SVOPQ8N4V2 548 aa8.38□□□□□ -1.07
LINC00871-203ENST00000556869 NANOS1Q8WY41 292 aaKnown RBP8.38□□□□□ -1.07
LINC00871-203ENST00000556869 SLC24A3Q9HC58 644 aa8.38□□□□□ -1.07
LINC00871-203ENST00000556869 FKBPLQ9UIM3 349 aa8.38□□□□□ -1.07
LINC00871-203ENST00000556869 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
LINC00871-203ENST00000556869 RNF225M0QZC1 329 aaPredicted RBP8.37□□□□□ -1.07
LINC00871-203ENST00000556869 INTS6LQ5JSJ4 861 aaKnown RBP8.37□□□□□ -1.07
LINC00871-203ENST00000556869 ZBTB33Q86T24 672 aa8.37□□□□□ -1.07
LINC00871-203ENST00000556869 INSM2Q96T92 566 aaPredicted RBP8.37□□□□□ -1.07
LINC00871-203ENST00000556869 ITGA6P23229 1130 aa8.36□□□□□ -1.07
LINC00871-203ENST00000556869 VWA5B2Q8N398 1253 aa8.36□□□□□ -1.07
LINC00871-203ENST00000556869 WHAMMQ8TF30 809 aa8.36□□□□□ -1.07
LINC00871-203ENST00000556869 RSPH6AQ9H0K4 717 aa8.36□□□□□ -1.07
LINC00871-203ENST00000556869 POLMQ9NP87 494 aaPredicted RBP8.36□□□□□ -1.07
LINC00871-203ENST00000556869 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
LINC00871-203ENST00000556869 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
LINC00871-203ENST00000556869 NR6A1Q15406 480 aa8.35□□□□□ -1.07
LINC00871-203ENST00000556869 RAB15P59190 212 aa8.34□□□□□ -1.07
LINC00871-203ENST00000556869 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
LINC00871-203ENST00000556869 FBXO31Q5XUX0 539 aaPredicted RBP8.33□□□□□ -1.08
LINC00871-203ENST00000556869 SV2AQ7L0J3 742 aa8.33□□□□□ -1.08
LINC00871-203ENST00000556869 RNF217Q8TC41 542 aa8.33□□□□□ -1.08
LINC00871-203ENST00000556869 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
LINC00871-203ENST00000556869 TMPRSS4Q9NRS4 437 aa8.33□□□□□ -1.08
LINC00871-203ENST00000556869 SLURP2P0DP57 97 aa8.32□□□□□ -1.08
LINC00871-203ENST00000556869 ZC3H4Q9UPT8 1303 aaKnown RBP8.31□□□□□ -1.08
LINC00871-203ENST00000556869 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
LINC00871-203ENST00000556869 SENP3-EIF4A1A0A087X0R7 540 aa8.3□□□□□ -1.08
LINC00871-203ENST00000556869 IRS1P35568 1242 aa8.3□□□□□ -1.08
LINC00871-203ENST00000556869 PTK2Q05397 1052 aa8.3□□□□□ -1.08
LINC00871-203ENST00000556869 ZNF784Q8NCA9 323 aaPredicted RBP8.3□□□□□ -1.08
LINC00871-203ENST00000556869 ATP1B4Q9UN42 357 aaPredicted RBP8.3□□□□□ -1.08
LINC00871-203ENST00000556869 ARHGEF15O94989 841 aa8.29□□□□□ -1.08
LINC00871-203ENST00000556869 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
LINC00871-203ENST00000556869 ADH1AP07327 375 aa8.28□□□□□ -1.08
LINC00871-203ENST00000556869 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
LINC00871-203ENST00000556869 FOXD4L5Q5VV16 416 aaPredicted RBP8.28□□□□□ -1.08
LINC00871-203ENST00000556869 GPAT2Q6NUI2 795 aa8.28□□□□□ -1.08
LINC00871-203ENST00000556869 PROCA1Q8NCQ7 364 aaPredicted RBP8.28□□□□□ -1.08
LINC00871-203ENST00000556869 EPS8L1Q8TE68 723 aa8.28□□□□□ -1.08
LINC00871-203ENST00000556869 AP1G2O75843 785 aa8.27□□□□□ -1.09
LINC00871-203ENST00000556869 ADAMTS2O95450 1211 aa8.27□□□□□ -1.09
LINC00871-203ENST00000556869 ERVH48-1M5A8F1 160 aa8.26□□□□□ -1.09
LINC00871-203ENST00000556869 LILRA1O75019 489 aa8.26□□□□□ -1.09
LINC00871-203ENST00000556869 ADD1P35611 737 aaKnown RBP8.26□□□□□ -1.09
LINC00871-203ENST00000556869 SKIV2LQ15477 1246 aaKnown RBP8.26□□□□□ -1.09
LINC00871-203ENST00000556869 CUEDC1Q9NWM3 386 aaPredicted RBP8.26□□□□□ -1.09
LINC00871-203ENST00000556869 GPSM3Q9Y4H4 160 aa8.26□□□□□ -1.09
LINC00871-203ENST00000556869 DNMT3AQ9Y6K1 912 aaPredicted RBP8.26□□□□□ -1.09
LINC00871-203ENST00000556869 SH3D19Q5HYK7 790 aa8.25□□□□□ -1.09
LINC00871-203ENST00000556869 LYPD4Q6UWN0 246 aa8.25□□□□□ -1.09
LINC00871-203ENST00000556869 DZIP3Q86Y13 1208 aaKnown RBP8.25□□□□□ -1.09
LINC00871-203ENST00000556869 KDF1Q8NAX2 398 aaPredicted RBP8.25□□□□□ -1.09
LINC00871-203ENST00000556869 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
LINC00871-203ENST00000556869 HMX1Q9NP08 348 aaPredicted RBP8.25□□□□□ -1.09
LINC00871-203ENST00000556869 PTGIRP43119 386 aa8.24□□□□□ -1.09
LINC00871-203ENST00000556869 GAS6Q14393 721 aa8.24□□□□□ -1.09
LINC00871-203ENST00000556869 PPP2R2DQ66LE6 453 aa8.24□□□□□ -1.09
LINC00871-203ENST00000556869 LYSMD3Q7Z3D4 306 aa8.24□□□□□ -1.09
LINC00871-203ENST00000556869 USP17L8P0C7I0 530 aa8.23□□□□□ -1.09
LINC00871-203ENST00000556869 RHOQP17081 205 aa8.23□□□□□ -1.09
LINC00871-203ENST00000556869 MAP3K10Q02779 954 aa8.23□□□□□ -1.09
LINC00871-203ENST00000556869 CYLDQ9NQC7 956 aa8.23□□□□□ -1.09
LINC00871-203ENST00000556869 KANK3Q6NY19 840 aa8.22□□□□□ -1.09
LINC00871-203ENST00000556869 PRICKLE2Q7Z3G6 844 aa8.22□□□□□ -1.09
LINC00871-203ENST00000556869 PNMA1Q8ND90 353 aa8.22□□□□□ -1.09
LINC00871-203ENST00000556869 SCARF2Q96GP6 870 aaPredicted RBP8.22□□□□□ -1.09
LINC00871-203ENST00000556869 GPBP1L1Q9HC44 474 aaPredicted RBP8.22□□□□□ -1.09
LINC00871-203ENST00000556869 CELA2BP08218 269 aaPredicted RBP8.21□□□□□ -1.1
LINC00871-203ENST00000556869 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms