RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 AXIN2Q9Y2T1 843 aa16.44■□□□□ 0.22
CCDC85C-205ENST00000556348 SBF2Q86WG5 1849 aa16.44■□□□□ 0.22
CCDC85C-205ENST00000556348 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
CCDC85C-205ENST00000556348 WDR17Q8IZU2 1322 aa16.44■□□□□ 0.22
CCDC85C-205ENST00000556348 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
CCDC85C-205ENST00000556348 RGPD3A6NKT7 1758 aaPredicted RBP16.43■□□□□ 0.22
CCDC85C-205ENST00000556348 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
CCDC85C-205ENST00000556348 SLIT3O75094 1523 aa16.42■□□□□ 0.22
CCDC85C-205ENST00000556348 KCNH5Q8NCM2 988 aa16.42■□□□□ 0.22
CCDC85C-205ENST00000556348 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
CCDC85C-205ENST00000556348 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
CCDC85C-205ENST00000556348 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
CCDC85C-205ENST00000556348 QRICH2Q9H0J4 1663 aa16.41■□□□□ 0.22
CCDC85C-205ENST00000556348 EXOC5O00471 708 aa16.41■□□□□ 0.22
CCDC85C-205ENST00000556348 PROM2Q8N271 834 aa16.41■□□□□ 0.22
CCDC85C-205ENST00000556348 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
CCDC85C-205ENST00000556348 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
CCDC85C-205ENST00000556348 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
CCDC85C-205ENST00000556348 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
CCDC85C-205ENST00000556348 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
CCDC85C-205ENST00000556348 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
CCDC85C-205ENST00000556348 COL18A1P39060 1754 aa16.38■□□□□ 0.21
CCDC85C-205ENST00000556348 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
CCDC85C-205ENST00000556348 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
CCDC85C-205ENST00000556348 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
CCDC85C-205ENST00000556348 BCL9O00512 1426 aa16.37■□□□□ 0.21
CCDC85C-205ENST00000556348 PTGER2P43116 358 aa16.37■□□□□ 0.21
CCDC85C-205ENST00000556348 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
CCDC85C-205ENST00000556348 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
CCDC85C-205ENST00000556348 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
CCDC85C-205ENST00000556348 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
CCDC85C-205ENST00000556348 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
CCDC85C-205ENST00000556348 MTFR1LQ9H019 292 aa16.35■□□□□ 0.21
CCDC85C-205ENST00000556348 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
CCDC85C-205ENST00000556348 MYOM1P52179 1685 aa16.34■□□□□ 0.21
CCDC85C-205ENST00000556348 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
CCDC85C-205ENST00000556348 ACSBG1Q96GR2 724 aa16.34■□□□□ 0.21
CCDC85C-205ENST00000556348 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
CCDC85C-205ENST00000556348 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
CCDC85C-205ENST00000556348 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
CCDC85C-205ENST00000556348 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
CCDC85C-205ENST00000556348 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
CCDC85C-205ENST00000556348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC85C-205ENST00000556348 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
CCDC85C-205ENST00000556348 ARXQ96QS3 562 aa16.3■□□□□ 0.2
CCDC85C-205ENST00000556348 TNS2Q63HR2 1409 aa16.29■□□□□ 0.2
CCDC85C-205ENST00000556348 KAT6BQ8WYB5 2073 aa16.29■□□□□ 0.2
CCDC85C-205ENST00000556348 IL2RBP14784 551 aa16.28■□□□□ 0.2
CCDC85C-205ENST00000556348 NFAT5O94916 1531 aa16.28■□□□□ 0.2
CCDC85C-205ENST00000556348 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.2
CCDC85C-205ENST00000556348 ERBB3P21860 1342 aa16.26■□□□□ 0.19
CCDC85C-205ENST00000556348 NEUROD1Q13562 356 aa16.26■□□□□ 0.19
CCDC85C-205ENST00000556348 TMC1Q8TDI8 760 aa16.26■□□□□ 0.19
CCDC85C-205ENST00000556348 NHSQ6T4R5 1651 aa16.26■□□□□ 0.19
CCDC85C-205ENST00000556348 ABCC6O95255 1503 aa16.25■□□□□ 0.19
CCDC85C-205ENST00000556348 GPR162Q16538 588 aa16.25■□□□□ 0.19
CCDC85C-205ENST00000556348 NME9Q86XW9 330 aa16.25■□□□□ 0.19
CCDC85C-205ENST00000556348 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
CCDC85C-205ENST00000556348 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
CCDC85C-205ENST00000556348 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
CCDC85C-205ENST00000556348 CHD4Q14839 1912 aa16.24■□□□□ 0.19
CCDC85C-205ENST00000556348 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
CCDC85C-205ENST00000556348 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
CCDC85C-205ENST00000556348 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
CCDC85C-205ENST00000556348 USP31Q70CQ4 1352 aa16.23■□□□□ 0.19
CCDC85C-205ENST00000556348 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
CCDC85C-205ENST00000556348 LRRC4BQ9NT99 713 aa16.22■□□□□ 0.19
CCDC85C-205ENST00000556348 BTAF1O14981 1849 aa16.22■□□□□ 0.19
CCDC85C-205ENST00000556348 POLD1P28340 1107 aa16.21■□□□□ 0.19
CCDC85C-205ENST00000556348 C1QTNF8P60827 252 aa16.21■□□□□ 0.19
CCDC85C-205ENST00000556348 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
CCDC85C-205ENST00000556348 MON2Q7Z3U7 1717 aa16.21■□□□□ 0.19
CCDC85C-205ENST00000556348 SLC27A3Q5K4L6 730 aa16.2■□□□□ 0.18
CCDC85C-205ENST00000556348 SLC16A10Q8TF71 515 aa16.2■□□□□ 0.18
CCDC85C-205ENST00000556348 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
CCDC85C-205ENST00000556348 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
CCDC85C-205ENST00000556348 MAP3K5Q99683 1374 aa16.2■□□□□ 0.18
CCDC85C-205ENST00000556348 LTN1O94822 1766 aa16.2■□□□□ 0.18
CCDC85C-205ENST00000556348 SBNO2Q9Y2G9 1366 aa16.19■□□□□ 0.18
CCDC85C-205ENST00000556348 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
CCDC85C-205ENST00000556348 SLC12A5Q9H2X9 1139 aa16.19■□□□□ 0.18
CCDC85C-205ENST00000556348 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
CCDC85C-205ENST00000556348 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
CCDC85C-205ENST00000556348 TERF2IPQ9NYB0 399 aa16.18■□□□□ 0.18
CCDC85C-205ENST00000556348 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
CCDC85C-205ENST00000556348 KCNQ4P56696 695 aa16.16■□□□□ 0.18
CCDC85C-205ENST00000556348 IP6K1Q92551 441 aa16.16■□□□□ 0.18
CCDC85C-205ENST00000556348 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
CCDC85C-205ENST00000556348 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
CCDC85C-205ENST00000556348 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
CCDC85C-205ENST00000556348 EDC4Q6P2E9 1401 aaKnown RBP16.15■□□□□ 0.18
CCDC85C-205ENST00000556348 PNPLA7Q6ZV29 1317 aa16.15■□□□□ 0.18
CCDC85C-205ENST00000556348 UTRNP46939 3433 aa16.15■□□□□ 0.18
CCDC85C-205ENST00000556348 USP54Q70EL1 1684 aa16.14■□□□□ 0.18
CCDC85C-205ENST00000556348 MSH5O43196 834 aa16.14■□□□□ 0.17
CCDC85C-205ENST00000556348 AMPHP49418 695 aa16.12■□□□□ 0.17
CCDC85C-205ENST00000556348 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
CCDC85C-205ENST00000556348 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
CCDC85C-205ENST00000556348 ZCRB1Q8TBF4 217 aaKnown RBP16.11■□□□□ 0.17
CCDC85C-205ENST00000556348 COG3Q96JB2 828 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms