RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-218ENST00000556343 YTHDC1Q96MU7 727 aaKnown RBP12.2□□□□□ -0.46
ACTN1-218ENST00000556343 BLMP54132 1417 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-218ENST00000556343 MAPK8IP3Q9UPT6 1336 aa12.19□□□□□ -0.46
ACTN1-218ENST00000556343 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-218ENST00000556343 CSB-PGBD3P0DP91 1061 aa12.19□□□□□ -0.46
ACTN1-218ENST00000556343 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
ACTN1-218ENST00000556343 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
ACTN1-218ENST00000556343 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
ACTN1-218ENST00000556343 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
ACTN1-218ENST00000556343 NFAT5O94916 1531 aa12.18□□□□□ -0.46
ACTN1-218ENST00000556343 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-218ENST00000556343 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-218ENST00000556343 HSPA1LP34931 641 aa12.18□□□□□ -0.46
ACTN1-218ENST00000556343 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
ACTN1-218ENST00000556343 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-218ENST00000556343 ANKRD24Q8TF21 1146 aa12.18□□□□□ -0.46
ACTN1-218ENST00000556343 CHRNA2Q15822 529 aa12.17□□□□□ -0.46
ACTN1-218ENST00000556343 SULT6B1Q6IMI4 303 aa12.16□□□□□ -0.46
ACTN1-218ENST00000556343 EYA1Q99502 592 aa12.16□□□□□ -0.46
ACTN1-218ENST00000556343 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-218ENST00000556343 FAM83GA6ND36 823 aa12.15□□□□□ -0.46
ACTN1-218ENST00000556343 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
ACTN1-218ENST00000556343 HMOX1P09601 288 aa12.15□□□□□ -0.46
ACTN1-218ENST00000556343 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
ACTN1-218ENST00000556343 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
ACTN1-218ENST00000556343 NLRP2Q9NX02 1062 aa12.15□□□□□ -0.46
ACTN1-218ENST00000556343 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
ACTN1-218ENST00000556343 ABCC6O95255 1503 aa12.15□□□□□ -0.46
ACTN1-218ENST00000556343 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.47
ACTN1-218ENST00000556343 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-218ENST00000556343 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
ACTN1-218ENST00000556343 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
ACTN1-218ENST00000556343 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
ACTN1-218ENST00000556343 FBXO41Q8TF61 875 aa12.14□□□□□ -0.47
ACTN1-218ENST00000556343 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
ACTN1-218ENST00000556343 ERBB3P21860 1342 aa12.13□□□□□ -0.47
ACTN1-218ENST00000556343 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
ACTN1-218ENST00000556343 BTG4Q9NY30 223 aa12.13□□□□□ -0.47
ACTN1-218ENST00000556343 COL22A1Q8NFW1 1626 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-218ENST00000556343 MARF1Q9Y4F3 1742 aaKnown RBP12.12□□□□□ -0.47
ACTN1-218ENST00000556343 APAF1O14727 1248 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 LMOD3Q0VAK6 560 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 NBPF6Q5VWK0 638 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 NBPF4Q96M43 638 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 STRN4Q9NRL3 753 aa12.12□□□□□ -0.47
ACTN1-218ENST00000556343 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
ACTN1-218ENST00000556343 WDR17Q8IZU2 1322 aa12.11□□□□□ -0.47
ACTN1-218ENST00000556343 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
ACTN1-218ENST00000556343 TATP17735 454 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-218ENST00000556343 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
ACTN1-218ENST00000556343 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-218ENST00000556343 TCP11L2Q8N4U5 519 aa12.11□□□□□ -0.47
ACTN1-218ENST00000556343 PLEKHF1Q96S99 279 aa12.11□□□□□ -0.47
ACTN1-218ENST00000556343 RIPK4P57078 832 aa12.1□□□□□ -0.47
ACTN1-218ENST00000556343 PDE3BQ13370 1112 aa12.1□□□□□ -0.47
ACTN1-218ENST00000556343 CARD10Q9BWT7 1032 aa12.1□□□□□ -0.47
ACTN1-218ENST00000556343 PEAK1Q9H792 1746 aa12.1□□□□□ -0.47
ACTN1-218ENST00000556343 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
ACTN1-218ENST00000556343 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
ACTN1-218ENST00000556343 NEUROD2Q15784 382 aa12.09□□□□□ -0.47
ACTN1-218ENST00000556343 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
ACTN1-218ENST00000556343 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
ACTN1-218ENST00000556343 AEBP1Q8IUX7 1158 aa12.09□□□□□ -0.47
ACTN1-218ENST00000556343 C8orf37Q96NL8 207 aa12.09□□□□□ -0.47
ACTN1-218ENST00000556343 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-218ENST00000556343 LTN1O94822 1766 aa12.09□□□□□ -0.47
ACTN1-218ENST00000556343 KDRP35968 1356 aa12.08□□□□□ -0.48
ACTN1-218ENST00000556343 SHPRHQ149N8 1683 aa12.08□□□□□ -0.48
ACTN1-218ENST00000556343 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
ACTN1-218ENST00000556343 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
ACTN1-218ENST00000556343 SPG7Q9UQ90 795 aa12.08□□□□□ -0.48
ACTN1-218ENST00000556343 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
ACTN1-218ENST00000556343 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
ACTN1-218ENST00000556343 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
ACTN1-218ENST00000556343 UNC5CLQ8IV45 518 aa12.07□□□□□ -0.48
ACTN1-218ENST00000556343 WDR63Q8IWG1 891 aa12.07□□□□□ -0.48
ACTN1-218ENST00000556343 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-218ENST00000556343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
ACTN1-218ENST00000556343 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
ACTN1-218ENST00000556343 CRYBG1Q9Y4K1 1723 aa12.06□□□□□ -0.48
ACTN1-218ENST00000556343 COL14A1Q05707 1796 aaKnown RBP12.06□□□□□ -0.48
ACTN1-218ENST00000556343 C1orf141Q5JVX7 400 aa12.06□□□□□ -0.48
ACTN1-218ENST00000556343 FNBP4Q8N3X1 1017 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-218ENST00000556343 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
ACTN1-218ENST00000556343 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
ACTN1-218ENST00000556343 COL5A2P05997 1499 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-218ENST00000556343 CRB1P82279 1406 aa12.05□□□□□ -0.48
ACTN1-218ENST00000556343 IL2RBP14784 551 aa12.05□□□□□ -0.48
ACTN1-218ENST00000556343 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
ACTN1-218ENST00000556343 USP21Q9UK80 565 aa12.05□□□□□ -0.48
ACTN1-218ENST00000556343 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
ACTN1-218ENST00000556343 CAMTA1Q9Y6Y1 1673 aa12.05□□□□□ -0.48
ACTN1-218ENST00000556343 GNAT3A8MTJ3 354 aa12.04□□□□□ -0.48
ACTN1-218ENST00000556343 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
ACTN1-218ENST00000556343 WWC1Q8IX03 1113 aa12.04□□□□□ -0.48
ACTN1-218ENST00000556343 COL18A1P39060 1754 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms