RNA–Protein interactions for RNA: ENST00000556321.1

PSMA3-210, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 500 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-210ENST00000556321 ANKK1Q8NFD2 765 aa8.24□□□□□ -1.09
PSMA3-210ENST00000556321 PCDHB3Q9Y5E6 796 aa8.24□□□□□ -1.09
PSMA3-210ENST00000556321 ARID4AP29374 1257 aaPredicted RBP8.23□□□□□ -1.09
PSMA3-210ENST00000556321 CTHP32929 405 aa8.23□□□□□ -1.09
PSMA3-210ENST00000556321 MMP16P51512 607 aa8.23□□□□□ -1.09
PSMA3-210ENST00000556321 PPP4CP60510 307 aa8.23□□□□□ -1.09
PSMA3-210ENST00000556321 KCNH2Q12809 1159 aa8.23□□□□□ -1.09
PSMA3-210ENST00000556321 MAP7D1Q3KQU3 841 aa8.23□□□□□ -1.09
PSMA3-210ENST00000556321 LARP1Q6PKG0 1096 aaKnown RBP8.23□□□□□ -1.09
PSMA3-210ENST00000556321 PLPP7Q8NBV4 271 aa8.23□□□□□ -1.09
PSMA3-210ENST00000556321 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
PSMA3-210ENST00000556321 RASA1P20936 1047 aa8.22□□□□□ -1.09
PSMA3-210ENST00000556321 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
PSMA3-210ENST00000556321 RNF135Q8IUD6 432 aa8.22□□□□□ -1.09
PSMA3-210ENST00000556321 ANKMY2Q8IV38 441 aa8.22□□□□□ -1.09
PSMA3-210ENST00000556321 TSR3Q9UJK0 312 aaKnown RBP8.22□□□□□ -1.09
PSMA3-210ENST00000556321 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
PSMA3-210ENST00000556321 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
PSMA3-210ENST00000556321 FAM200AQ8TCP9 573 aa8.21□□□□□ -1.1
PSMA3-210ENST00000556321 NUDT12Q9BQG2 462 aa8.21□□□□□ -1.1
PSMA3-210ENST00000556321 PCDHB9Q9Y5E1 797 aa8.21□□□□□ -1.1
PSMA3-210ENST00000556321 RBM47A0AV96 593 aaKnown RBP8.2□□□□□ -1.1
PSMA3-210ENST00000556321 SWI5Q1ZZU3 235 aa8.2□□□□□ -1.1
PSMA3-210ENST00000556321 IFFO2Q5TF58 517 aa8.2□□□□□ -1.1
PSMA3-210ENST00000556321 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
PSMA3-210ENST00000556321 ERCC3P19447 782 aa8.19□□□□□ -1.1
PSMA3-210ENST00000556321 EML3Q32P44 896 aa8.19□□□□□ -1.1
PSMA3-210ENST00000556321 DNAJC14Q6Y2X3 702 aaPredicted RBP8.19□□□□□ -1.1
PSMA3-210ENST00000556321 C1orf216Q8TAB5 229 aa8.19□□□□□ -1.1
PSMA3-210ENST00000556321 SOWAHDA6NJG2 315 aa8.18□□□□□ -1.1
PSMA3-210ENST00000556321 BCAMP50895 628 aa8.18□□□□□ -1.1
PSMA3-210ENST00000556321 SH3BP5LQ7L8J4 393 aa8.18□□□□□ -1.1
PSMA3-210ENST00000556321 TRIM50Q86XT4 487 aa8.18□□□□□ -1.1
PSMA3-210ENST00000556321 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
PSMA3-210ENST00000556321 SPSB2Q99619 263 aa8.18□□□□□ -1.1
PSMA3-210ENST00000556321 DKK1O94907 266 aa8.17□□□□□ -1.1
PSMA3-210ENST00000556321 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
PSMA3-210ENST00000556321 CLDN10P78369 228 aa8.17□□□□□ -1.1
PSMA3-210ENST00000556321 DPYDQ12882 1025 aa8.17□□□□□ -1.1
PSMA3-210ENST00000556321 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
PSMA3-210ENST00000556321 ARHGAP9Q9BRR9 750 aa8.17□□□□□ -1.1
PSMA3-210ENST00000556321 GOLGA8CPA6NN73 597 aa8.16□□□□□ -1.1
PSMA3-210ENST00000556321 ATP1A2P50993 1020 aa8.16□□□□□ -1.1
PSMA3-210ENST00000556321 Q6ZNB5 142 aa8.16□□□□□ -1.1
PSMA3-210ENST00000556321 SIX5Q8N196 739 aa8.16□□□□□ -1.1
PSMA3-210ENST00000556321 LARGE2Q8N3Y3 721 aa8.16□□□□□ -1.1
PSMA3-210ENST00000556321 DNAAF2Q9NVR5 837 aaKnown RBP8.16□□□□□ -1.1
PSMA3-210ENST00000556321 UNCXA6NJT0 531 aa8.15□□□□□ -1.1
PSMA3-210ENST00000556321 PRDM9Q9NQV7 894 aa8.15□□□□□ -1.1
PSMA3-210ENST00000556321 NOD1Q9Y239 953 aa8.15□□□□□ -1.1
PSMA3-210ENST00000556321 A0A0G2JS52 829 aa8.14□□□□□ -1.11
PSMA3-210ENST00000556321 SERPINB4P48594 390 aa8.14□□□□□ -1.11
PSMA3-210ENST00000556321 SH3RF1Q7Z6J0 888 aa8.14□□□□□ -1.11
PSMA3-210ENST00000556321 CCDC85AQ96PX6 553 aaPredicted RBP8.14□□□□□ -1.11
PSMA3-210ENST00000556321 UNC93B1Q9H1C4 597 aa8.14□□□□□ -1.11
PSMA3-210ENST00000556321 ZBTB7BO15156 539 aaPredicted RBP8.13□□□□□ -1.11
PSMA3-210ENST00000556321 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
PSMA3-210ENST00000556321 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
PSMA3-210ENST00000556321 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
PSMA3-210ENST00000556321 WNT2BQ93097 391 aa8.13□□□□□ -1.11
PSMA3-210ENST00000556321 KCTD12Q96CX2 325 aaKnown RBP8.13□□□□□ -1.11
PSMA3-210ENST00000556321 ZNF594Q96JF6 807 aaPredicted RBP8.13□□□□□ -1.11
PSMA3-210ENST00000556321 IGSF5Q9NSI5 407 aa8.13□□□□□ -1.11
PSMA3-210ENST00000556321 DOLKQ9UPQ8 538 aa8.13□□□□□ -1.11
PSMA3-210ENST00000556321 CCDC180Q9P1Z9 1646 aa8.13□□□□□ -1.11
PSMA3-210ENST00000556321 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
PSMA3-210ENST00000556321 DZIP3Q86Y13 1208 aaKnown RBP8.12□□□□□ -1.11
PSMA3-210ENST00000556321 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
PSMA3-210ENST00000556321 KIAA1024Q9UPX6 916 aa8.12□□□□□ -1.11
PSMA3-210ENST00000556321 IGSF3O75054 1194 aa8.11□□□□□ -1.11
PSMA3-210ENST00000556321 ADH1BP00325 375 aa8.11□□□□□ -1.11
PSMA3-210ENST00000556321 OCLNQ16625 522 aa8.11□□□□□ -1.11
PSMA3-210ENST00000556321 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
PSMA3-210ENST00000556321 STAC3Q96MF2 364 aa8.11□□□□□ -1.11
PSMA3-210ENST00000556321 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
PSMA3-210ENST00000556321 EGFL7Q9UHF1 273 aa8.11□□□□□ -1.11
PSMA3-210ENST00000556321 SEC13P55735 322 aa8.1□□□□□ -1.11
PSMA3-210ENST00000556321 GTF2IP78347 998 aa8.1□□□□□ -1.11
PSMA3-210ENST00000556321 COPS2P61201 443 aa8.09□□□□□ -1.11
PSMA3-210ENST00000556321 RNF20Q5VTR2 975 aa8.09□□□□□ -1.11
PSMA3-210ENST00000556321 SIRT1Q96EB6 747 aa8.09□□□□□ -1.11
PSMA3-210ENST00000556321 TLL1O43897 1013 aa8.08□□□□□ -1.12
PSMA3-210ENST00000556321 GIGYF1O75420 1035 aaPredicted RBP8.08□□□□□ -1.12
PSMA3-210ENST00000556321 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
PSMA3-210ENST00000556321 ERFEQ4G0M1 354 aa8.08□□□□□ -1.12
PSMA3-210ENST00000556321 CCDC102BQ68D86 513 aa8.08□□□□□ -1.12
PSMA3-210ENST00000556321 CCDC125Q86Z20 511 aa8.08□□□□□ -1.12
PSMA3-210ENST00000556321 PCDHGA11Q9Y5H2 935 aa8.08□□□□□ -1.12
PSMA3-210ENST00000556321 ESPNB1AK53 854 aa8.07□□□□□ -1.12
PSMA3-210ENST00000556321 ZPR1O75312 459 aa8.07□□□□□ -1.12
PSMA3-210ENST00000556321 SCNN1AP37088 669 aa8.07□□□□□ -1.12
PSMA3-210ENST00000556321 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
PSMA3-210ENST00000556321 NYAP1Q6ZVC0 841 aa8.07□□□□□ -1.12
PSMA3-210ENST00000556321 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
PSMA3-210ENST00000556321 KIAA1522Q9P206 1035 aaPredicted RBP8.07□□□□□ -1.12
PSMA3-210ENST00000556321 PRMT3O60678 531 aa8.06□□□□□ -1.12
PSMA3-210ENST00000556321 ZNF16P17020 682 aaPredicted RBP8.06□□□□□ -1.12
PSMA3-210ENST00000556321 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
PSMA3-210ENST00000556321 BPHLQ86WA6 291 aaPredicted RBP8.06□□□□□ -1.12
PSMA3-210ENST00000556321 NPAS4Q8IUM7 802 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms