RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 DNMT3AQ9Y6K1 912 aaPredicted RBP7.76□□□□□ -1.17
SUPT16H-206ENST00000556309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.75□□□□□ -1.174e-10■■■■■ 29.2
SUPT16H-206ENST00000556309 TMEM259Q4ZIN3 620 aa7.75□□□□□ -1.17
SUPT16H-206ENST00000556309 KANK3Q6NY19 840 aa7.75□□□□□ -1.17
SUPT16H-206ENST00000556309 HMX1Q9NP08 348 aaPredicted RBP7.75□□□□□ -1.17
SUPT16H-206ENST00000556309 SNRKQ9NRH2 765 aa7.75□□□□□ -1.17
SUPT16H-206ENST00000556309 BMP2P12643 396 aa7.74□□□□□ -1.17
SUPT16H-206ENST00000556309 BPHLQ86WA6 291 aaPredicted RBP7.74□□□□□ -1.17
SUPT16H-206ENST00000556309 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
SUPT16H-206ENST00000556309 ARMC2Q8NEN0 867 aa7.74□□□□□ -1.17
SUPT16H-206ENST00000556309 EPS8L1Q8TE68 723 aa7.74□□□□□ -1.17
SUPT16H-206ENST00000556309 TSEN34Q9BSV6 310 aaKnown RBP7.74□□□□□ -1.17
SUPT16H-206ENST00000556309 ADAMTS8Q9UP79 889 aa7.74□□□□□ -1.17
SUPT16H-206ENST00000556309 F12P00748 615 aaPredicted RBP7.73□□□□□ -1.17
SUPT16H-206ENST00000556309 NR6A1Q15406 480 aa7.73□□□□□ -1.17
SUPT16H-206ENST00000556309 MEIOBQ8N635 442 aa7.73□□□□□ -1.17
SUPT16H-206ENST00000556309 NANOS1Q8WY41 292 aaKnown RBP7.73□□□□□ -1.17
SUPT16H-206ENST00000556309 SOS2Q07890 1332 aaPredicted RBP7.73□□□□□ -1.17
SUPT16H-206ENST00000556309 MAP4K5Q9Y4K4 846 aa7.72□□□□□ -1.17
SUPT16H-206ENST00000556309 C6orf118Q5T5N4 469 aa7.71□□□□□ -1.18
SUPT16H-206ENST00000556309 ITPKCQ96DU7 683 aa7.71□□□□□ -1.18
SUPT16H-206ENST00000556309 SOBPA7XYQ1 873 aa7.7□□□□□ -1.18
SUPT16H-206ENST00000556309 ARID5BQ14865 1188 aa7.7□□□□□ -1.18
SUPT16H-206ENST00000556309 MTMR14Q8NCE2 650 aa7.7□□□□□ -1.18
SUPT16H-206ENST00000556309 BANK1Q8NDB2 785 aa7.7□□□□□ -1.18
SUPT16H-206ENST00000556309 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
SUPT16H-206ENST00000556309 EMILIN1Q9Y6C2 1016 aa7.7□□□□□ -1.18
SUPT16H-206ENST00000556309 GTF3C3Q9Y5Q9 886 aa7.69□□□□□ -1.18
SUPT16H-206ENST00000556309 AGERQ15109 404 aa7.68□□□□□ -1.18
SUPT16H-206ENST00000556309 SVOPQ8N4V2 548 aa7.68□□□□□ -1.18
SUPT16H-206ENST00000556309 GJD4Q96KN9 370 aaPredicted RBP7.68□□□□□ -1.18
SUPT16H-206ENST00000556309 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
SUPT16H-206ENST00000556309 ZFAND3Q9H8U3 227 aa7.68□□□□□ -1.18
SUPT16H-206ENST00000556309 SLURP2P0DP57 97 aa7.67□□□□□ -1.18
SUPT16H-206ENST00000556309 GRM5P41594 1212 aa7.67□□□□□ -1.18
SUPT16H-206ENST00000556309 MCM6Q14566 821 aa7.67□□□□□ -1.18
SUPT16H-206ENST00000556309 NBPF14Q5TI25 921 aa7.67□□□□□ -1.18
SUPT16H-206ENST00000556309 CNTNAP3BQ96NU0 1288 aa7.67□□□□□ -1.18
SUPT16H-206ENST00000556309 CNTNAP3Q9BZ76 1288 aa7.67□□□□□ -1.18
SUPT16H-206ENST00000556309 TTLL8A6PVC2 850 aa7.66□□□□□ -1.18
SUPT16H-206ENST00000556309 MARSP56192 900 aaKnown RBP7.66□□□□□ -1.18
SUPT16H-206ENST00000556309 TRMT44Q8IYL2 757 aaKnown RBP7.66□□□□□ -1.18
SUPT16H-206ENST00000556309 DNMT3LQ9UJW3 386 aa7.66□□□□□ -1.18
SUPT16H-206ENST00000556309 NR3C2P08235 984 aa7.65□□□□□ -1.18
SUPT16H-206ENST00000556309 GPKOWQ92917 476 aaPredicted RBP eCLIP7.65□□□□□ -1.18
SUPT16H-206ENST00000556309 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.18
SUPT16H-206ENST00000556309 KRT76Q01546 638 aa7.64□□□□□ -1.19
SUPT16H-206ENST00000556309 PTSQ03393 145 aa7.64□□□□□ -1.19
SUPT16H-206ENST00000556309 ZNF385CQ66K41 422 aaPredicted RBP7.64□□□□□ -1.19
SUPT16H-206ENST00000556309 FOXJ1Q92949 421 aa7.64□□□□□ -1.19
SUPT16H-206ENST00000556309 C1QTNF2Q9BXJ5 285 aa7.64□□□□□ -1.19
SUPT16H-206ENST00000556309 ENAMQ9NRM1 1142 aa7.64□□□□□ -1.19
SUPT16H-206ENST00000556309 PGPEP1Q9NXJ5 209 aa7.64□□□□□ -1.19
SUPT16H-206ENST00000556309 GPAT2Q6NUI2 795 aa7.63□□□□□ -1.19
SUPT16H-206ENST00000556309 CCDC116Q8IYX3 515 aa7.63□□□□□ -1.19
SUPT16H-206ENST00000556309 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
SUPT16H-206ENST00000556309 FKBPLQ9UIM3 349 aa7.63□□□□□ -1.19
SUPT16H-206ENST00000556309 CDV3Q9UKY7 258 aaKnown RBP7.63□□□□□ -1.19
SUPT16H-206ENST00000556309 TBC1D2BQ9UPU7 963 aa7.63□□□□□ -1.19
SUPT16H-206ENST00000556309 ARHGEF15O94989 841 aa7.62□□□□□ -1.19
SUPT16H-206ENST00000556309 FLIIQ13045 1269 aa7.62□□□□□ -1.19
SUPT16H-206ENST00000556309 SV2AQ7L0J3 742 aa7.62□□□□□ -1.19
SUPT16H-206ENST00000556309 VASH1Q7L8A9 365 aaPredicted RBP7.62□□□□□ -1.19
SUPT16H-206ENST00000556309 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
SUPT16H-206ENST00000556309 GDPD2Q9HCC8 539 aa7.62□□□□□ -1.19
SUPT16H-206ENST00000556309 FSHRP23945 695 aa7.61□□□□□ -1.19
SUPT16H-206ENST00000556309 IRS1P35568 1242 aa7.61□□□□□ -1.19
SUPT16H-206ENST00000556309 MAP3K10Q02779 954 aa7.61□□□□□ -1.19
SUPT16H-206ENST00000556309 CCDC155Q8N6L0 562 aa7.61□□□□□ -1.19
SUPT16H-206ENST00000556309 NDUFB9Q9Y6M9 179 aa7.61□□□□□ -1.19
SUPT16H-206ENST00000556309 SPINT1O43278 529 aa7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 GPR37L1O60883 481 aa7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 UBTFP17480 764 aaKnown RBP7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 ABL2P42684 1182 aa7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 SH3RF1Q7Z6J0 888 aa7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 GPR161Q8N6U8 529 aaKnown RBP7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 CLUAP1Q96AJ1 413 aa7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 CARD14Q9BXL6 1004 aa7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 COG6Q9Y2V7 657 aa7.6□□□□□ -1.19
SUPT16H-206ENST00000556309 MAGEB6P1A0A0J9YX57 407 aa7.59□□□□□ -1.19
SUPT16H-206ENST00000556309 SLC35F4A4IF30 521 aa7.59□□□□□ -1.19
SUPT16H-206ENST00000556309 PHF20L1A8MW92 1017 aa7.59□□□□□ -1.19
SUPT16H-206ENST00000556309 ITGA6P23229 1130 aa7.59□□□□□ -1.19
SUPT16H-206ENST00000556309 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
SUPT16H-206ENST00000556309 Q6ZVU0 165 aa7.59□□□□□ -1.19
SUPT16H-206ENST00000556309 APBB1O00213 710 aa7.58□□□□□ -1.2
SUPT16H-206ENST00000556309 SOCS7O14512 581 aa7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 PDXDC2PQ6P474 469 aa7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 SH3BP5LQ7L8J4 393 aa7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 PNMA1Q8ND90 353 aa7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 GMCL1Q96IK5 515 aa7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 OCSTAMPQ9BR26 566 aa7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 ARHGAP9Q9BRR9 750 aa7.57□□□□□ -1.2
SUPT16H-206ENST00000556309 IRF5Q13568 498 aa7.56□□□□□ -1.2
SUPT16H-206ENST00000556309 PRM3Q9NNZ6 103 aa7.56□□□□□ -1.2
SUPT16H-206ENST00000556309 ZC3H4Q9UPT8 1303 aaKnown RBP7.55□□□□□ -1.2
SUPT16H-206ENST00000556309 MSTNO14793 375 aa7.55□□□□□ -1.2
SUPT16H-206ENST00000556309 RAD21O60216 631 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms