RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 DEFB132Q7Z7B7 95 aa17.7■□□□□ 0.42
SNX6-207ENST00000556303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX6-207ENST00000556303 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
SNX6-207ENST00000556303 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
SNX6-207ENST00000556303 COL18A1P39060 1754 aa17.69■□□□□ 0.42
SNX6-207ENST00000556303 ZBTB7CA1YPR0 619 aa17.69■□□□□ 0.42
SNX6-207ENST00000556303 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
SNX6-207ENST00000556303 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
SNX6-207ENST00000556303 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
SNX6-207ENST00000556303 USP47Q96K76 1375 aa17.68■□□□□ 0.42
SNX6-207ENST00000556303 NFAT5O94916 1531 aa17.68■□□□□ 0.42
SNX6-207ENST00000556303 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
SNX6-207ENST00000556303 PCGF6Q9BYE7 350 aa17.68■□□□□ 0.42
SNX6-207ENST00000556303 NME9Q86XW9 330 aa17.67■□□□□ 0.42
SNX6-207ENST00000556303 CARD10Q9BWT7 1032 aa17.67■□□□□ 0.42
SNX6-207ENST00000556303 FAM182BQ5T319 152 aa17.66■□□□□ 0.42
SNX6-207ENST00000556303 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
SNX6-207ENST00000556303 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
SNX6-207ENST00000556303 PARP4Q9UKK3 1724 aaKnown RBP17.64■□□□□ 0.41
SNX6-207ENST00000556303 SOX12O15370 315 aa17.64■□□□□ 0.41
SNX6-207ENST00000556303 PARD3Q8TEW0 1356 aa17.64■□□□□ 0.41
SNX6-207ENST00000556303 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
SNX6-207ENST00000556303 TRIM37O94972 964 aa17.63■□□□□ 0.41
SNX6-207ENST00000556303 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
SNX6-207ENST00000556303 DDB1Q16531 1140 aa17.63■□□□□ 0.41
SNX6-207ENST00000556303 OVOS2A0A0J9YW53 1432 aa17.63■□□□□ 0.41
SNX6-207ENST00000556303 OVOS2Q6IE36 1432 aa17.63■□□□□ 0.41
SNX6-207ENST00000556303 EN1Q05925 392 aaPredicted RBP17.61■□□□□ 0.41
SNX6-207ENST00000556303 COG3Q96JB2 828 aa17.61■□□□□ 0.41
SNX6-207ENST00000556303 CAMKK2Q96RR4 588 aa17.6■□□□□ 0.41
SNX6-207ENST00000556303 ERBB3P21860 1342 aa17.6■□□□□ 0.41
SNX6-207ENST00000556303 OVOS2A0A0G2JMS6 1433 aa17.6■□□□□ 0.41
SNX6-207ENST00000556303 BCL9O00512 1426 aa17.6■□□□□ 0.41
SNX6-207ENST00000556303 APBA3O96018 575 aa17.59■□□□□ 0.41
SNX6-207ENST00000556303 EXOC5O00471 708 aa17.58■□□□□ 0.4
SNX6-207ENST00000556303 IP6K1Q92551 441 aa17.58■□□□□ 0.4
SNX6-207ENST00000556303 RGPD5Q99666 1765 aa17.58■□□□□ 0.4
SNX6-207ENST00000556303 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.4
SNX6-207ENST00000556303 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
SNX6-207ENST00000556303 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
SNX6-207ENST00000556303 ANKRD24Q8TF21 1146 aa17.56■□□□□ 0.4
SNX6-207ENST00000556303 FYB1O15117 783 aa17.55■□□□□ 0.4
SNX6-207ENST00000556303 PLSCR1O15162 318 aa17.55■□□□□ 0.4
SNX6-207ENST00000556303 NLRP2Q9NX02 1062 aa17.55■□□□□ 0.4
SNX6-207ENST00000556303 LTN1O94822 1766 aa17.55■□□□□ 0.4
SNX6-207ENST00000556303 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
SNX6-207ENST00000556303 MARCH10Q8NA82 808 aaPredicted RBP17.54■□□□□ 0.4
SNX6-207ENST00000556303 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
SNX6-207ENST00000556303 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
SNX6-207ENST00000556303 PEAK1Q9H792 1746 aa17.53■□□□□ 0.4
SNX6-207ENST00000556303 IL2RBP14784 551 aa17.53■□□□□ 0.4
SNX6-207ENST00000556303 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
SNX6-207ENST00000556303 MAP3K19Q56UN5 1328 aa17.51■□□□□ 0.39
SNX6-207ENST00000556303 HOXC9P31274 260 aa17.51■□□□□ 0.39
SNX6-207ENST00000556303 AMPHP49418 695 aa17.51■□□□□ 0.39
SNX6-207ENST00000556303 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNX6-207ENST00000556303 NBPF14Q5TI25 921 aa17.51■□□□□ 0.39
SNX6-207ENST00000556303 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
SNX6-207ENST00000556303 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
SNX6-207ENST00000556303 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
SNX6-207ENST00000556303 SBF2Q86WG5 1849 aa17.49■□□□□ 0.39
SNX6-207ENST00000556303 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
SNX6-207ENST00000556303 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
SNX6-207ENST00000556303 R3HDM1Q15032 1099 aaKnown RBP17.47■□□□□ 0.39
SNX6-207ENST00000556303 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
SNX6-207ENST00000556303 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
SNX6-207ENST00000556303 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
SNX6-207ENST00000556303 RREB1Q92766 1687 aa17.45■□□□□ 0.38
SNX6-207ENST00000556303 CGNL1Q0VF96 1302 aa17.45■□□□□ 0.38
SNX6-207ENST00000556303 LRP5O75197 1615 aa17.44■□□□□ 0.38
SNX6-207ENST00000556303 RRS1Q15050 365 aaKnown RBP17.44■□□□□ 0.38
SNX6-207ENST00000556303 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
SNX6-207ENST00000556303 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
SNX6-207ENST00000556303 HSPA5P11021 654 aaKnown RBP17.43■□□□□ 0.38
SNX6-207ENST00000556303 FBLN1P23142 703 aa17.43■□□□□ 0.38
SNX6-207ENST00000556303 SMG6Q86US8 1419 aaKnown RBP17.43■□□□□ 0.38
SNX6-207ENST00000556303 MYOM1P52179 1685 aa17.42■□□□□ 0.38
SNX6-207ENST00000556303 INSRP06213 1382 aa17.42■□□□□ 0.38
SNX6-207ENST00000556303 FLT4P35916 1363 aa17.42■□□□□ 0.38
SNX6-207ENST00000556303 KIF20BQ96Q89 1820 aa17.42■□□□□ 0.38
SNX6-207ENST00000556303 NUP188Q5SRE5 1749 aa17.41■□□□□ 0.38
SNX6-207ENST00000556303 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
SNX6-207ENST00000556303 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
SNX6-207ENST00000556303 PROM2Q8N271 834 aa17.39■□□□□ 0.37
SNX6-207ENST00000556303 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
SNX6-207ENST00000556303 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
SNX6-207ENST00000556303 KAT6BQ8WYB5 2073 aa17.39■□□□□ 0.37
SNX6-207ENST00000556303 KCNQ2O43526 872 aa17.38■□□□□ 0.37
SNX6-207ENST00000556303 TXNRD1Q16881 649 aa17.38■□□□□ 0.37
SNX6-207ENST00000556303 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
SNX6-207ENST00000556303 NHSQ6T4R5 1651 aa17.37■□□□□ 0.37
SNX6-207ENST00000556303 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
SNX6-207ENST00000556303 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
SNX6-207ENST00000556303 ACSBG1Q96GR2 724 aa17.36■□□□□ 0.37
SNX6-207ENST00000556303 POLR3GLQ9BT43 218 aa17.36■□□□□ 0.37
SNX6-207ENST00000556303 WASHC2AQ641Q2 1341 aa17.36■□□□□ 0.37
SNX6-207ENST00000556303 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
SNX6-207ENST00000556303 PANK3Q9H999 370 aa17.35■□□□□ 0.37
SNX6-207ENST00000556303 NSD2O96028 1365 aa17.35■□□□□ 0.37
SNX6-207ENST00000556303 EMILIN1Q9Y6C2 1016 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms