RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 FCF1Q9Y324 198 aaKnown RBP7.41□□□□□ -1.22
ATXN3-238ENST00000556288 PLB1Q6P1J6 1458 aa7.41□□□□□ -1.22
ATXN3-238ENST00000556288 PER1O15534 1290 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-238ENST00000556288 ANKLE1Q8NAG6 615 aa7.4□□□□□ -1.22
ATXN3-238ENST00000556288 FHOD3Q2V2M9 1422 aa7.4□□□□□ -1.22
ATXN3-238ENST00000556288 RAPGEF6Q8TEU7 1601 aa7.39□□□□□ -1.23
ATXN3-238ENST00000556288 SAMD9Q5K651 1589 aa7.39□□□□□ -1.23
ATXN3-238ENST00000556288 PTPRNQ16849 979 aa7.39□□□□□ -1.23
ATXN3-238ENST00000556288 NUDT12Q9BQG2 462 aa7.39□□□□□ -1.23
ATXN3-238ENST00000556288 STK17AQ9UEE5 414 aa7.39□□□□□ -1.23
ATXN3-238ENST00000556288 ABCC2Q92887 1545 aa7.38□□□□□ -1.23
ATXN3-238ENST00000556288 USP17L8P0C7I0 530 aa7.38□□□□□ -1.23
ATXN3-238ENST00000556288 CCNYL3P0C7X3 344 aa7.38□□□□□ -1.23
ATXN3-238ENST00000556288 CTHP32929 405 aa7.38□□□□□ -1.23
ATXN3-238ENST00000556288 LRRN4Q8WUT4 740 aa7.38□□□□□ -1.23
ATXN3-238ENST00000556288 EMID1Q96A84 441 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-238ENST00000556288 ASXL2Q76L83 1435 aa7.37□□□□□ -1.23
ATXN3-238ENST00000556288 BANK1Q8NDB2 785 aa7.37□□□□□ -1.23
ATXN3-238ENST00000556288 EVA1BQ9NVM1 165 aa7.37□□□□□ -1.23
ATXN3-238ENST00000556288 ABCA8O94911 1581 aa7.37□□□□□ -1.23
ATXN3-238ENST00000556288 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
ATXN3-238ENST00000556288 ZBTB24O43167 697 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-238ENST00000556288 KCNH2Q12809 1159 aa7.36□□□□□ -1.23
ATXN3-238ENST00000556288 PLA2G2CQ5R387 149 aa7.36□□□□□ -1.23
ATXN3-238ENST00000556288 PTCRAQ6ISU1 281 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-238ENST00000556288 EFCAB5A4FU69 1503 aa7.36□□□□□ -1.23
ATXN3-238ENST00000556288 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
ATXN3-238ENST00000556288 PRR20EP86478 221 aa7.35□□□□□ -1.23
ATXN3-238ENST00000556288 PRR20CP86479 221 aa7.35□□□□□ -1.23
ATXN3-238ENST00000556288 PRR20DP86480 221 aa7.35□□□□□ -1.23
ATXN3-238ENST00000556288 PRR20BP86481 221 aa7.35□□□□□ -1.23
ATXN3-238ENST00000556288 PRR20AP86496 221 aa7.35□□□□□ -1.23
ATXN3-238ENST00000556288 SNRKQ9NRH2 765 aa7.35□□□□□ -1.23
ATXN3-238ENST00000556288 MAP10Q9P2G4 905 aa7.35□□□□□ -1.23
ATXN3-238ENST00000556288 DIP2BQ9P265 1576 aa7.34□□□□□ -1.23
ATXN3-238ENST00000556288 MAPKBP1O60336 1514 aa7.34□□□□□ -1.23
ATXN3-238ENST00000556288 SLC19A1P41440 591 aa7.34□□□□□ -1.23
ATXN3-238ENST00000556288 LRRIQ1Q96JM4 1722 aa7.34□□□□□ -1.23
ATXN3-238ENST00000556288 ABCC10Q5T3U5 1492 aa7.34□□□□□ -1.23
ATXN3-238ENST00000556288 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
ATXN3-238ENST00000556288 CLIP1P30622 1438 aa7.34□□□□□ -1.23
ATXN3-238ENST00000556288 KDM5BQ9UGL1 1544 aa7.33□□□□□ -1.24
ATXN3-238ENST00000556288 ATP10BO94823 1461 aa7.33□□□□□ -1.24
ATXN3-238ENST00000556288 ST8SIA5O15466 376 aa7.33□□□□□ -1.24
ATXN3-238ENST00000556288 WFS1O76024 890 aa7.33□□□□□ -1.24
ATXN3-238ENST00000556288 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-238ENST00000556288 NR6A1Q15406 480 aa7.33□□□□□ -1.24
ATXN3-238ENST00000556288 LIAT1Q6ZQX7 453 aa7.33□□□□□ -1.24
ATXN3-238ENST00000556288 HMX1Q9NP08 348 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-238ENST00000556288 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
ATXN3-238ENST00000556288 FAM187AA6NFU0 413 aa7.32□□□□□ -1.24
ATXN3-238ENST00000556288 WIPF1O43516 503 aa7.32□□□□□ -1.24
ATXN3-238ENST00000556288 CD2BP2O95400 341 aaKnown RBP7.32□□□□□ -1.24
ATXN3-238ENST00000556288 UNC93B1Q9H1C4 597 aa7.32□□□□□ -1.24
ATXN3-238ENST00000556288 AAASQ9NRG9 546 aa7.32□□□□□ -1.24
ATXN3-238ENST00000556288 CDK11AQ9UQ88 783 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-238ENST00000556288 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
ATXN3-238ENST00000556288 RPIAP49247 311 aa7.31□□□□□ -1.24
ATXN3-238ENST00000556288 FLIIQ13045 1269 aa7.31□□□□□ -1.24
ATXN3-238ENST00000556288 SPRYD7Q5W111 196 aa7.31□□□□□ -1.24
ATXN3-238ENST00000556288 MTMR14Q8NCE2 650 aa7.31□□□□□ -1.24
ATXN3-238ENST00000556288 EPS8L1Q8TE68 723 aa7.31□□□□□ -1.24
ATXN3-238ENST00000556288 CFAP43Q8NDM7 1665 aa7.31□□□□□ -1.24
ATXN3-238ENST00000556288 CDK13Q14004 1512 aaKnown RBP7.31□□□□□ -1.24
ATXN3-238ENST00000556288 HECW1Q76N89 1606 aa7.3□□□□□ -1.24
ATXN3-238ENST00000556288 WDR7Q9Y4E6 1490 aa7.3□□□□□ -1.24
ATXN3-238ENST00000556288 APBB1O00213 710 aa7.3□□□□□ -1.24
ATXN3-238ENST00000556288 NFX1Q12986 1120 aaKnown RBP7.3□□□□□ -1.24
ATXN3-238ENST00000556288 ZNF598Q86UK7 904 aaKnown RBP7.3□□□□□ -1.24
ATXN3-238ENST00000556288 ARMC2Q8NEN0 867 aa7.3□□□□□ -1.24
ATXN3-238ENST00000556288 EPRSP07814 1512 aaKnown RBP7.3□□□□□ -1.24
ATXN3-238ENST00000556288 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
ATXN3-238ENST00000556288 CEP162Q5TB80 1403 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 CD109Q6YHK3 1445 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 TRIM32Q13049 653 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 MCM6Q14566 821 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 PNMA1Q8ND90 353 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 BAP1Q92560 729 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 KDM6BO15054 1643 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 MAP3K4Q9Y6R4 1608 aa7.29□□□□□ -1.24
ATXN3-238ENST00000556288 PPRC1Q5VV67 1664 aaKnown RBP7.28□□□□□ -1.24
ATXN3-238ENST00000556288 GDF9O60383 454 aa7.28□□□□□ -1.24
ATXN3-238ENST00000556288 INSM1Q01101 510 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-238ENST00000556288 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
ATXN3-238ENST00000556288 GJD4Q96KN9 370 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-238ENST00000556288 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
ATXN3-238ENST00000556288 PRM3Q9NNZ6 103 aa7.28□□□□□ -1.24
ATXN3-238ENST00000556288 FKBPLQ9UIM3 349 aa7.28□□□□□ -1.24
ATXN3-238ENST00000556288 PCF11O94913 1555 aaKnown RBP7.28□□□□□ -1.24
ATXN3-238ENST00000556288 GLI2P10070 1586 aa7.28□□□□□ -1.24
ATXN3-238ENST00000556288 MYO5CQ9NQX4 1742 aa7.27□□□□□ -1.25
ATXN3-238ENST00000556288 TNFRSF10AO00220 468 aa7.27□□□□□ -1.25
ATXN3-238ENST00000556288 SOCS7O14512 581 aa7.26□□□□□ -1.25
ATXN3-238ENST00000556288 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
ATXN3-238ENST00000556288 ZNF697Q5TEC3 545 aa7.26□□□□□ -1.25
ATXN3-238ENST00000556288 ZNF511Q8NB15 262 aa7.26□□□□□ -1.25
ATXN3-238ENST00000556288 DACH1Q9UI36 760 aa7.26□□□□□ -1.25
ATXN3-238ENST00000556288 ZNF777Q9ULD5 760 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-238ENST00000556288 NDUFB9Q9Y6M9 179 aa7.26□□□□□ -1.25
ATXN3-238ENST00000556288 TEX14Q8IWB6 1497 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms