RNA–Protein interactions for RNA: ENST00000556138.1

LINC01550-205, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 4

Gene LINC01550, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-205ENST00000556138 ZIC2O95409 532 aaPredicted RBP8.17□□□□□ -1.1
LINC01550-205ENST00000556138 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
LINC01550-205ENST00000556138 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
LINC01550-205ENST00000556138 MCM6Q14566 821 aa8.16□□□□□ -1.1
LINC01550-205ENST00000556138 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
LINC01550-205ENST00000556138 SNRPBP14678 240 aaKnown RBP8.15□□□□□ -1.1
LINC01550-205ENST00000556138 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
LINC01550-205ENST00000556138 IRF5Q13568 498 aa8.14□□□□□ -1.11
LINC01550-205ENST00000556138 DZIP3Q86Y13 1208 aaKnown RBP8.14□□□□□ -1.11
LINC01550-205ENST00000556138 PCDHB9Q9Y5E1 797 aa8.14□□□□□ -1.11
LINC01550-205ENST00000556138 C11orf95C9JLR9 678 aaPredicted RBP8.13□□□□□ -1.11
LINC01550-205ENST00000556138 RAB15P59190 212 aa8.13□□□□□ -1.11
LINC01550-205ENST00000556138 NR1H3Q13133 447 aa8.13□□□□□ -1.11
LINC01550-205ENST00000556138 TMEM132AQ24JP5 1023 aa8.13□□□□□ -1.11
LINC01550-205ENST00000556138 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
LINC01550-205ENST00000556138 ESPNB1AK53 854 aa8.12□□□□□ -1.11
LINC01550-205ENST00000556138 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
LINC01550-205ENST00000556138 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
LINC01550-205ENST00000556138 TMPRSS4Q9NRS4 437 aa8.12□□□□□ -1.11
LINC01550-205ENST00000556138 CDV3Q9UKY7 258 aaKnown RBP8.12□□□□□ -1.11
LINC01550-205ENST00000556138 CBLBQ13191 982 aa8.11□□□□□ -1.11
LINC01550-205ENST00000556138 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
LINC01550-205ENST00000556138 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
LINC01550-205ENST00000556138 PURBQ96QR8 312 aaKnown RBP8.11□□□□□ -1.11
LINC01550-205ENST00000556138 EMILIN1Q9Y6C2 1016 aa8.11□□□□□ -1.11
LINC01550-205ENST00000556138 APBB1O00213 710 aa8.1□□□□□ -1.11
LINC01550-205ENST00000556138 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
LINC01550-205ENST00000556138 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
LINC01550-205ENST00000556138 MEIOBQ8N635 442 aa8.1□□□□□ -1.11
LINC01550-205ENST00000556138 ZNF775Q96BV0 537 aaPredicted RBP8.1□□□□□ -1.11
LINC01550-205ENST00000556138 ERVH48-1M5A8F1 160 aa8.09□□□□□ -1.11
LINC01550-205ENST00000556138 POM121Q96HA1 1249 aa8.09□□□□□ -1.11
LINC01550-205ENST00000556138 ABL2P42684 1182 aa8.08□□□□□ -1.12
LINC01550-205ENST00000556138 C6orf118Q5T5N4 469 aa8.08□□□□□ -1.12
LINC01550-205ENST00000556138 SENP2Q9HC62 589 aa8.08□□□□□ -1.12
LINC01550-205ENST00000556138 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
LINC01550-205ENST00000556138 SOBPA7XYQ1 873 aa8.07□□□□□ -1.12
LINC01550-205ENST00000556138 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
LINC01550-205ENST00000556138 ZNF784Q8NCA9 323 aaPredicted RBP8.07□□□□□ -1.12
LINC01550-205ENST00000556138 PGPEP1Q9NXJ5 209 aa8.07□□□□□ -1.12
LINC01550-205ENST00000556138 LILRA1O75019 489 aa8.06□□□□□ -1.12
LINC01550-205ENST00000556138 ADD1P35611 737 aaKnown RBP8.06□□□□□ -1.12
LINC01550-205ENST00000556138 DHX9Q08211 1270 aaKnown RBP8.06□□□□□ -1.12
LINC01550-205ENST00000556138 VAC14Q08AM6 782 aa8.06□□□□□ -1.12
LINC01550-205ENST00000556138 Q6ZVU0 165 aa8.06□□□□□ -1.12
LINC01550-205ENST00000556138 KIFC2Q96AC6 838 aa8.06□□□□□ -1.12
LINC01550-205ENST00000556138 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
LINC01550-205ENST00000556138 SCARF1Q14162 830 aa8.05□□□□□ -1.12
LINC01550-205ENST00000556138 SEPT12Q8IYM1 358 aa8.04□□□□□ -1.12
LINC01550-205ENST00000556138 CYLDQ9NQC7 956 aa8.04□□□□□ -1.12
LINC01550-205ENST00000556138 BMP2P12643 396 aa8.03□□□□□ -1.12
LINC01550-205ENST00000556138 KDF1Q8NAX2 398 aaPredicted RBP8.03□□□□□ -1.12
LINC01550-205ENST00000556138 PRM3Q9NNZ6 103 aa8.03□□□□□ -1.12
LINC01550-205ENST00000556138 TSEN34Q9BSV6 310 aaKnown RBP8.02□□□□□ -1.13
LINC01550-205ENST00000556138 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
LINC01550-205ENST00000556138 ZNF330Q9Y3S2 320 aaPredicted RBP8.02□□□□□ -1.13
LINC01550-205ENST00000556138 SCTRP47872 440 aa8.01□□□□□ -1.13
LINC01550-205ENST00000556138 RELBQ01201 579 aa8.01□□□□□ -1.13
LINC01550-205ENST00000556138 TSGA10IPQ3SY00 556 aa8.01□□□□□ -1.13
LINC01550-205ENST00000556138 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
LINC01550-205ENST00000556138 SOS2Q07890 1332 aaPredicted RBP8.01□□□□□ -1.13
LINC01550-205ENST00000556138 UPP2O95045 317 aa8□□□□□ -1.13
LINC01550-205ENST00000556138 ADH1AP07327 375 aa8□□□□□ -1.13
LINC01550-205ENST00000556138 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
LINC01550-205ENST00000556138 FLIIQ13045 1269 aa8□□□□□ -1.13
LINC01550-205ENST00000556138 LCE2CQ5TA81 110 aa8□□□□□ -1.13
LINC01550-205ENST00000556138 CDCA7Q9BWT1 371 aaPredicted RBP8□□□□□ -1.13
LINC01550-205ENST00000556138 ZNF395Q9H8N7 513 aaPredicted RBP8□□□□□ -1.13
LINC01550-205ENST00000556138 DNMT3LQ9UJW3 386 aa8□□□□□ -1.13
LINC01550-205ENST00000556138 SPINT1O43278 529 aa7.99□□□□□ -1.13
LINC01550-205ENST00000556138 UBTFP17480 764 aaKnown RBP7.99□□□□□ -1.13
LINC01550-205ENST00000556138 EIF4G2P78344 907 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC01550-205ENST00000556138 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
LINC01550-205ENST00000556138 INSM2Q96T92 566 aaPredicted RBP7.99□□□□□ -1.13
LINC01550-205ENST00000556138 PCDHB11Q9Y5F2 797 aa7.99□□□□□ -1.13
LINC01550-205ENST00000556138 CTSOP43234 321 aaPredicted RBP7.98□□□□□ -1.13
LINC01550-205ENST00000556138 ERVK-9P63128 1117 aa7.98□□□□□ -1.13
LINC01550-205ENST00000556138 NFX1Q12986 1120 aaKnown RBP7.98□□□□□ -1.13
LINC01550-205ENST00000556138 WASHC4Q2M389 1173 aa7.98□□□□□ -1.13
LINC01550-205ENST00000556138 PHTF2Q8N3S3 785 aa7.98□□□□□ -1.13
LINC01550-205ENST00000556138 CLUAP1Q96AJ1 413 aa7.98□□□□□ -1.13
LINC01550-205ENST00000556138 POM121CA8CG34 1229 aa7.97□□□□□ -1.13
LINC01550-205ENST00000556138 PTGIRP43119 386 aa7.97□□□□□ -1.13
LINC01550-205ENST00000556138 VEGFBP49765 207 aa7.97□□□□□ -1.13
LINC01550-205ENST00000556138 RNF20Q5VTR2 975 aa7.97□□□□□ -1.13
LINC01550-205ENST00000556138 FIGNL2A6NMB9 653 aa7.96□□□□□ -1.14
LINC01550-205ENST00000556138 TTLL8A6PVC2 850 aa7.96□□□□□ -1.14
LINC01550-205ENST00000556138 MAN1A2O60476 641 aa7.96□□□□□ -1.14
LINC01550-205ENST00000556138 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.14
LINC01550-205ENST00000556138 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
LINC01550-205ENST00000556138 ZNF592Q92610 1267 aa7.96□□□□□ -1.14
LINC01550-205ENST00000556138 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
LINC01550-205ENST00000556138 TERTO14746 1132 aaKnown RBP7.95□□□□□ -1.14
LINC01550-205ENST00000556138 FOXD4L5Q5VV16 416 aaPredicted RBP7.95□□□□□ -1.14
LINC01550-205ENST00000556138 OSBPL3Q9H4L5 887 aa7.95□□□□□ -1.14
LINC01550-205ENST00000556138 RAD21O60216 631 aa7.94□□□□□ -1.14
LINC01550-205ENST00000556138 TRAK2O60296 914 aa7.94□□□□□ -1.14
LINC01550-205ENST00000556138 RNF135Q8IUD6 432 aa7.94□□□□□ -1.14
LINC01550-205ENST00000556138 ADAMTS19Q8TE59 1207 aa7.94□□□□□ -1.14
LINC01550-205ENST00000556138 ALG2Q9H553 416 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms