RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
ATXN3-235ENST00000556082 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
ATXN3-235ENST00000556082 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
ATXN3-235ENST00000556082 WNT2BQ93097 391 aa11.31□□□□□ -0.6
ATXN3-235ENST00000556082 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
ATXN3-235ENST00000556082 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
ATXN3-235ENST00000556082 TSPOAP1O95153 1857 aa11.31□□□□□ -0.6
ATXN3-235ENST00000556082 ARHGEF40Q8TER5 1519 aa11.3□□□□□ -0.6
ATXN3-235ENST00000556082 COL9A1P20849 921 aa11.3□□□□□ -0.6
ATXN3-235ENST00000556082 ERVK-7P63135 1459 aa11.3□□□□□ -0.6
ATXN3-235ENST00000556082 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
ATXN3-235ENST00000556082 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
ATXN3-235ENST00000556082 PPLO60437 1756 aa11.28□□□□□ -0.6
ATXN3-235ENST00000556082 CCDC184Q52MB2 194 aa11.28□□□□□ -0.6
ATXN3-235ENST00000556082 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
ATXN3-235ENST00000556082 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
ATXN3-235ENST00000556082 NEXMIFQ5QGS0 1516 aa11.28□□□□□ -0.6
ATXN3-235ENST00000556082 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
ATXN3-235ENST00000556082 PREX1Q8TCU6 1659 aa11.27□□□□□ -0.6
ATXN3-235ENST00000556082 PTPN5P54829 565 aa11.27□□□□□ -0.61
ATXN3-235ENST00000556082 FBXO31Q5XUX0 539 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-235ENST00000556082 PANK3Q9H999 370 aa11.27□□□□□ -0.61
ATXN3-235ENST00000556082 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
ATXN3-235ENST00000556082 BRD4O60885 1362 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-235ENST00000556082 PARD3Q8TEW0 1356 aa11.27□□□□□ -0.61
ATXN3-235ENST00000556082 SPATA31D1Q6ZQQ2 1576 aa11.26□□□□□ -0.61
ATXN3-235ENST00000556082 DDX12PQ92771 950 aa11.26□□□□□ -0.61
ATXN3-235ENST00000556082 TMEM131LA2VDJ0 1609 aa11.25□□□□□ -0.61
ATXN3-235ENST00000556082 MYO3AQ8NEV4 1616 aa11.25□□□□□ -0.61
ATXN3-235ENST00000556082 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-235ENST00000556082 PROX2Q3B8N5 592 aa11.25□□□□□ -0.61
ATXN3-235ENST00000556082 PNISRQ8TF01 805 aaKnown RBP11.25□□□□□ -0.61
ATXN3-235ENST00000556082 CENPJQ9HC77 1338 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-235ENST00000556082 NPC1L1Q9UHC9 1359 aa11.25□□□□□ -0.61
ATXN3-235ENST00000556082 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
ATXN3-235ENST00000556082 KIAA1468Q9P260 1216 aa11.24□□□□□ -0.61
ATXN3-235ENST00000556082 ZMYM3Q14202 1370 aa11.24□□□□□ -0.61
ATXN3-235ENST00000556082 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
ATXN3-235ENST00000556082 HNRNPUQ00839 825 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATXN3-235ENST00000556082 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
ATXN3-235ENST00000556082 NLRP13Q86W25 1043 aa11.23□□□□□ -0.61
ATXN3-235ENST00000556082 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
ATXN3-235ENST00000556082 INSRP06213 1382 aa11.23□□□□□ -0.61
ATXN3-235ENST00000556082 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
ATXN3-235ENST00000556082 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
ATXN3-235ENST00000556082 CFAP65Q6ZU64 1925 aaKnown RBP11.21□□□□□ -0.61
ATXN3-235ENST00000556082 LRPPRCP42704 1394 aaKnown RBP11.21□□□□□ -0.61
ATXN3-235ENST00000556082 ZBED9Q6R2W3 1325 aa11.21□□□□□ -0.61
ATXN3-235ENST00000556082 NBR1Q14596 966 aa11.21□□□□□ -0.61
ATXN3-235ENST00000556082 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.61
ATXN3-235ENST00000556082 KNSTRNQ9Y448 316 aa11.21□□□□□ -0.61
ATXN3-235ENST00000556082 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
ATXN3-235ENST00000556082 A2ML1A8K2U0 1454 aa11.2□□□□□ -0.62
ATXN3-235ENST00000556082 HDGFP51858 240 aaKnown RBP11.2□□□□□ -0.62
ATXN3-235ENST00000556082 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
ATXN3-235ENST00000556082 FAM9BQ8IZU0 186 aa11.2□□□□□ -0.62
ATXN3-235ENST00000556082 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
ATXN3-235ENST00000556082 TRAK1Q9UPV9 953 aa11.2□□□□□ -0.62
ATXN3-235ENST00000556082 MAP3K7O43318 606 aa11.19□□□□□ -0.62
ATXN3-235ENST00000556082 MLECQ14165 292 aa11.19□□□□□ -0.62
ATXN3-235ENST00000556082 TMEM132EQ6IEE7 984 aa11.19□□□□□ -0.62
ATXN3-235ENST00000556082 ZFRQ96KR1 1074 aaKnown RBP11.19□□□□□ -0.62
ATXN3-235ENST00000556082 SOWAHBA6NEL2 793 aa11.18□□□□□ -0.62
ATXN3-235ENST00000556082 RGS20O76081 388 aa11.18□□□□□ -0.62
ATXN3-235ENST00000556082 FAM98CQ17RN3 349 aaKnown RBP11.18□□□□□ -0.62
ATXN3-235ENST00000556082 KDM5AP29375 1690 aaKnown RBP11.17□□□□□ -0.62
ATXN3-235ENST00000556082 ASXL1Q8IXJ9 1541 aa11.17□□□□□ -0.62
ATXN3-235ENST00000556082 RIMS2Q9UQ26 1411 aa11.17□□□□□ -0.62
ATXN3-235ENST00000556082 TNRQ92752 1358 aa11.16□□□□□ -0.62
ATXN3-235ENST00000556082 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
ATXN3-235ENST00000556082 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-235ENST00000556082 CC2D1BQ5T0F9 858 aaKnown RBP11.15□□□□□ -0.62
ATXN3-235ENST00000556082 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
ATXN3-235ENST00000556082 YTHDC2Q9H6S0 1430 aaKnown RBP11.15□□□□□ -0.62
ATXN3-235ENST00000556082 NINLQ9Y2I6 1382 aa11.15□□□□□ -0.63
ATXN3-235ENST00000556082 ALKQ9UM73 1620 aa11.14□□□□□ -0.63
ATXN3-235ENST00000556082 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
ATXN3-235ENST00000556082 ABCC11Q96J66 1382 aa11.14□□□□□ -0.63
ATXN3-235ENST00000556082 DLC1Q96QB1 1528 aa11.14□□□□□ -0.63
ATXN3-235ENST00000556082 NLRP1Q9C000 1473 aa11.13□□□□□ -0.63
ATXN3-235ENST00000556082 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
ATXN3-235ENST00000556082 MYOM1P52179 1685 aa11.13□□□□□ -0.63
ATXN3-235ENST00000556082 PTPRMP28827 1452 aa11.12□□□□□ -0.63
ATXN3-235ENST00000556082 QRICH2Q9H0J4 1663 aa11.12□□□□□ -0.63
ATXN3-235ENST00000556082 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
ATXN3-235ENST00000556082 PRSS12P56730 875 aa11.12□□□□□ -0.63
ATXN3-235ENST00000556082 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
ATXN3-235ENST00000556082 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
ATXN3-235ENST00000556082 SUPT16HQ9Y5B9 1047 aaKnown RBP11.12□□□□□ -0.63
ATXN3-235ENST00000556082 TMEM2Q9UHN6 1383 aa11.12□□□□□ -0.63
ATXN3-235ENST00000556082 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
ATXN3-235ENST00000556082 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
ATXN3-235ENST00000556082 OSBPP22059 807 aa11.11□□□□□ -0.63
ATXN3-235ENST00000556082 CNGB1Q14028 1251 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-235ENST00000556082 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
ATXN3-235ENST00000556082 CDCA7LQ96GN5 454 aa11.11□□□□□ -0.63
ATXN3-235ENST00000556082 TSKSQ9UJT2 592 aa11.11□□□□□ -0.63
ATXN3-235ENST00000556082 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
ATXN3-235ENST00000556082 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-235ENST00000556082 PRAM1Q96QH2 718 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms