RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 CD163L1Q9NR16 1453 aa28.08■■■□□ 2.09
PRKCH-219ENST00000555906 RGPD3A6NKT7 1758 aaPredicted RBP28.07■■■□□ 2.08
PRKCH-219ENST00000555906 RGPD4Q7Z3J3 1758 aa28.07■■■□□ 2.08
PRKCH-219ENST00000555906 SBF2Q86WG5 1849 aa28.07■■■□□ 2.08
PRKCH-219ENST00000555906 OVOS2A0A0G2JMS6 1433 aa28.05■■■□□ 2.08
PRKCH-219ENST00000555906 OVOS2A0A0J9YW53 1432 aa28.05■■■□□ 2.08
PRKCH-219ENST00000555906 PSDA5PKW4 1024 aaPredicted RBP28.05■■■□□ 2.08
PRKCH-219ENST00000555906 OVOS2Q6IE36 1432 aa28.05■■■□□ 2.08
PRKCH-219ENST00000555906 WDR17Q8IZU2 1322 aa28.05■■■□□ 2.08
PRKCH-219ENST00000555906 LTN1O94822 1766 aa28.04■■■□□ 2.08
PRKCH-219ENST00000555906 EZH2Q15910 746 aaKnown RBP28.04■■■□□ 2.08
PRKCH-219ENST00000555906 ARHGEF25Q86VW2 580 aa28.04■■■□□ 2.08
PRKCH-219ENST00000555906 CAMKK2Q96RR4 588 aa28.04■■■□□ 2.08
PRKCH-219ENST00000555906 USP31Q70CQ4 1352 aa28.02■■■□□ 2.08
PRKCH-219ENST00000555906 C11orf95C9JLR9 678 aaPredicted RBP28.02■■■□□ 2.08
PRKCH-219ENST00000555906 TOM1L2Q6ZVM7 507 aa28.02■■■□□ 2.08
PRKCH-219ENST00000555906 APBA3O96018 575 aa28.01■■■□□ 2.07
PRKCH-219ENST00000555906 AXIN2Q9Y2T1 843 aa28.01■■■□□ 2.07
PRKCH-219ENST00000555906 EDC4Q6P2E9 1401 aaKnown RBP27.99■■■□□ 2.07
PRKCH-219ENST00000555906 SOX12O15370 315 aa27.97■■■□□ 2.07
PRKCH-219ENST00000555906 R3HDM1Q15032 1099 aaKnown RBP27.97■■■□□ 2.07
PRKCH-219ENST00000555906 CDCA7Q9BWT1 371 aaPredicted RBP27.96■■■□□ 2.07
PRKCH-219ENST00000555906 DDB1Q16531 1140 aa27.95■■■□□ 2.06
PRKCH-219ENST00000555906 PUS7Q96PZ0 661 aaKnown RBP27.95■■■□□ 2.06
PRKCH-219ENST00000555906 BCL9O00512 1426 aa27.94■■■□□ 2.06
PRKCH-219ENST00000555906 HDGFL2Q7Z4V5 671 aaPredicted RBP27.94■■■□□ 2.06
PRKCH-219ENST00000555906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.94■■■□□ 2.06
PRKCH-219ENST00000555906 CARD10Q9BWT7 1032 aa27.94■■■□□ 2.06
PRKCH-219ENST00000555906 A0A1W2PP64 1363 aa27.94■■■□□ 2.06
PRKCH-219ENST00000555906 NINLQ9Y2I6 1382 aa27.94■■■□□ 2.06
PRKCH-219ENST00000555906 TMC1Q8TDI8 760 aa27.93■■■□□ 2.06
PRKCH-219ENST00000555906 CCDC7Q96M83 1385 aa27.93■■■□□ 2.06
PRKCH-219ENST00000555906 CSB-PGBD3P0DP91 1061 aa27.91■■■□□ 2.06
PRKCH-219ENST00000555906 NME9Q86XW9 330 aa27.91■■■□□ 2.06
PRKCH-219ENST00000555906 TNS2Q63HR2 1409 aa27.91■■■□□ 2.06
PRKCH-219ENST00000555906 TRIM26Q12899 539 aaPredicted RBP27.9■■■□□ 2.06
PRKCH-219ENST00000555906 SLC12A5Q9H2X9 1139 aa27.9■■■□□ 2.06
PRKCH-219ENST00000555906 TERF2IPQ9NYB0 399 aa27.9■■■□□ 2.06
PRKCH-219ENST00000555906 FAM208AQ9UK61 1670 aaKnown RBP27.89■■■□□ 2.06
PRKCH-219ENST00000555906 TESK2Q96S53 571 aa27.88■■■□□ 2.05
PRKCH-219ENST00000555906 ERBB3P21860 1342 aa27.87■■■□□ 2.05
PRKCH-219ENST00000555906 NHSQ6T4R5 1651 aa27.84■■■□□ 2.05
PRKCH-219ENST00000555906 NBPF14Q5TI25 921 aa27.84■■■□□ 2.05
PRKCH-219ENST00000555906 MARCH10Q8NA82 808 aaPredicted RBP27.84■■■□□ 2.05
PRKCH-219ENST00000555906 ST20-MTHFSA0A0A6YYL1 179 aa27.83■■■□□ 2.05
PRKCH-219ENST00000555906 SLC24A1O60721 1099 aa27.83■■■□□ 2.05
PRKCH-219ENST00000555906 BCL11BQ9C0K0 894 aaPredicted RBP27.83■■■□□ 2.05
PRKCH-219ENST00000555906 PLSCR1O15162 318 aa27.81■■■□□ 2.04
PRKCH-219ENST00000555906 ANKRD36BQ8N2N9 1353 aa27.78■■■□□ 2.04
PRKCH-219ENST00000555906 USP47Q96K76 1375 aa27.78■■■□□ 2.04
PRKCH-219ENST00000555906 EXOC5O00471 708 aa27.78■■■□□ 2.04
PRKCH-219ENST00000555906 CASZ1Q86V15 1759 aa27.78■■■□□ 2.04
PRKCH-219ENST00000555906 ANKRD24Q8TF21 1146 aa27.76■■■□□ 2.03
PRKCH-219ENST00000555906 PTF1AQ7RTS3 328 aa27.75■■■□□ 2.03
PRKCH-219ENST00000555906 NLRP2Q9NX02 1062 aa27.75■■■□□ 2.03
PRKCH-219ENST00000555906 KIF20BQ96Q89 1820 aa27.74■■■□□ 2.03
PRKCH-219ENST00000555906 IL2RBP14784 551 aa27.72■■■□□ 2.03
PRKCH-219ENST00000555906 MYOM1P52179 1685 aa27.72■■■□□ 2.03
PRKCH-219ENST00000555906 BTAF1O14981 1849 aa27.71■■■□□ 2.03
PRKCH-219ENST00000555906 TMF1P82094 1093 aa27.7■■■□□ 2.02
PRKCH-219ENST00000555906 IP6K1Q92551 441 aa27.7■■■□□ 2.02
PRKCH-219ENST00000555906 COG3Q96JB2 828 aa27.7■■■□□ 2.02
PRKCH-219ENST00000555906 ANO8Q9HCE9 1232 aaPredicted RBP27.69■■■□□ 2.02
PRKCH-219ENST00000555906 RGPD2P0DJD1 1756 aa27.68■■■□□ 2.02
PRKCH-219ENST00000555906 RTL1A6NKG5 1358 aa27.68■■■□□ 2.02
PRKCH-219ENST00000555906 PAPPAQ13219 1627 aa27.67■■■□□ 2.02
PRKCH-219ENST00000555906 SHANK3Q9BYB0 1731 aa27.67■■■□□ 2.02
PRKCH-219ENST00000555906 MAP3K19Q56UN5 1328 aa27.67■■■□□ 2.02
PRKCH-219ENST00000555906 PROM2Q8N271 834 aa27.66■■■□□ 2.02
PRKCH-219ENST00000555906 SPON1Q9HCB6 807 aa27.64■■■□□ 2.02
PRKCH-219ENST00000555906 HOXC9P31274 260 aa27.63■■■□□ 2.01
PRKCH-219ENST00000555906 TXNRD1Q16881 649 aa27.63■■■□□ 2.01
PRKCH-219ENST00000555906 KAT6BQ8WYB5 2073 aa27.63■■■□□ 2.01
PRKCH-219ENST00000555906 DOT1LQ8TEK3 1739 aa27.62■■■□□ 2.01
PRKCH-219ENST00000555906 KCNQ2O43526 872 aa27.62■■■□□ 2.01
PRKCH-219ENST00000555906 CDCA8Q53HL2 280 aa27.62■■■□□ 2.01
PRKCH-219ENST00000555906 CLSPNQ9HAW4 1339 aa27.61■■■□□ 2.01
PRKCH-219ENST00000555906 ACSBG1Q96GR2 724 aa27.6■■■□□ 2.01
PRKCH-219ENST00000555906 TIMELESSQ9UNS1 1208 aa27.6■■■□□ 2.01
PRKCH-219ENST00000555906 AMPHP49418 695 aa27.59■■■□□ 2.01
PRKCH-219ENST00000555906 LTV1Q96GA3 475 aaPredicted RBP27.59■■■□□ 2.01
PRKCH-219ENST00000555906 FYB1O15117 783 aa27.57■■■□□ 2
PRKCH-219ENST00000555906 STK32BQ9NY57 414 aa27.57■■■□□ 2
PRKCH-219ENST00000555906 PPP1R1BQ9UD71 204 aaPredicted RBP27.57■■■□□ 2
PRKCH-219ENST00000555906 MEGF6O75095 1541 aa27.57■■■□□ 2
PRKCH-219ENST00000555906 GGNBP2Q9H3C7 697 aa27.55■■■□□ 2
PRKCH-219ENST00000555906 SMG6Q86US8 1419 aaKnown RBP27.55■■■□□ 2
PRKCH-219ENST00000555906 QSER1Q2KHR3 1735 aa27.55■■■□□ 2
PRKCH-219ENST00000555906 ANKRD26Q9UPS8 1709 aa27.55■■■□□ 2
PRKCH-219ENST00000555906 FBLN1P23142 703 aa27.54■■■□□ 2
PRKCH-219ENST00000555906 SLC15A2Q16348 729 aa27.54■■■□□ 2
PRKCH-219ENST00000555906 KIF24Q5T7B8 1368 aa27.52■■■□□ 2
PRKCH-219ENST00000555906 RRS1Q15050 365 aaKnown RBP27.52■■■□□ 2
PRKCH-219ENST00000555906 PDGFDQ9GZP0 370 aaPredicted RBP27.52■■■□□ 2
PRKCH-219ENST00000555906 LY75O60449 1722 aa27.52■■■□□ 2
PRKCH-219ENST00000555906 NSD3Q9BZ95 1437 aa27.51■■□□□ 1.99
PRKCH-219ENST00000555906 FLT4P35916 1363 aa27.5■■□□□ 1.99
PRKCH-219ENST00000555906 DDX54Q8TDD1 881 aaKnown RBP27.49■■□□□ 1.99
PRKCH-219ENST00000555906 INSRP06213 1382 aa27.48■■□□□ 1.99
PRKCH-219ENST00000555906 TUBGCP6Q96RT7 1819 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms