RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 EN1Q05925 392 aaPredicted RBP17.98■□□□□ 0.47
HNRNPC-221ENST00000555883 CDCA7Q9BWT1 371 aaPredicted RBP17.98■□□□□ 0.47
HNRNPC-221ENST00000555883 EDC4Q6P2E9 1401 aaKnown RBP17.98■□□□□ 0.47
HNRNPC-221ENST00000555883 TRIM37O94972 964 aa17.97■□□□□ 0.47
HNRNPC-221ENST00000555883 CAMKK2Q96RR4 588 aa17.97■□□□□ 0.47
HNRNPC-221ENST00000555883 AXIN2Q9Y2T1 843 aa17.97■□□□□ 0.47
HNRNPC-221ENST00000555883 LRP5O75197 1615 aa17.97■□□□□ 0.47
HNRNPC-221ENST00000555883 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.47
HNRNPC-221ENST00000555883 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
HNRNPC-221ENST00000555883 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
HNRNPC-221ENST00000555883 OVOS2A0A0G2JMS6 1433 aa17.96■□□□□ 0.47
HNRNPC-221ENST00000555883 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
HNRNPC-221ENST00000555883 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
HNRNPC-221ENST00000555883 TESK2Q96S53 571 aa17.95■□□□□ 0.46
HNRNPC-221ENST00000555883 BCL9O00512 1426 aa17.95■□□□□ 0.46
HNRNPC-221ENST00000555883 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
HNRNPC-221ENST00000555883 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
HNRNPC-221ENST00000555883 CARD10Q9BWT7 1032 aa17.94■□□□□ 0.46
HNRNPC-221ENST00000555883 PEAK1Q9H792 1746 aa17.94■□□□□ 0.46
HNRNPC-221ENST00000555883 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
HNRNPC-221ENST00000555883 APBA3O96018 575 aa17.93■□□□□ 0.46
HNRNPC-221ENST00000555883 EZH2Q15910 746 aaKnown RBP17.93■□□□□ 0.46
HNRNPC-221ENST00000555883 DDB1Q16531 1140 aa17.93■□□□□ 0.46
HNRNPC-221ENST00000555883 TMC1Q8TDI8 760 aa17.93■□□□□ 0.46
HNRNPC-221ENST00000555883 SLC12A5Q9H2X9 1139 aa17.93■□□□□ 0.46
HNRNPC-221ENST00000555883 CCDC7Q96M83 1385 aa17.92■□□□□ 0.46
HNRNPC-221ENST00000555883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.92■□□□□ 0.46
HNRNPC-221ENST00000555883 WNK3Q9BYP7 1800 aa17.92■□□□□ 0.46
HNRNPC-221ENST00000555883 RREB1Q92766 1687 aa17.91■□□□□ 0.46
HNRNPC-221ENST00000555883 ST20-MTHFSA0A0A6YYL1 179 aa17.91■□□□□ 0.46
HNRNPC-221ENST00000555883 NME9Q86XW9 330 aa17.9■□□□□ 0.46
HNRNPC-221ENST00000555883 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
HNRNPC-221ENST00000555883 RGPD3A6NKT7 1758 aaPredicted RBP17.89■□□□□ 0.45
HNRNPC-221ENST00000555883 RGPD4Q7Z3J3 1758 aa17.89■□□□□ 0.45
HNRNPC-221ENST00000555883 SOX12O15370 315 aa17.89■□□□□ 0.45
HNRNPC-221ENST00000555883 ERBB3P21860 1342 aa17.89■□□□□ 0.45
HNRNPC-221ENST00000555883 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
HNRNPC-221ENST00000555883 PSDA5PKW4 1024 aaPredicted RBP17.88■□□□□ 0.45
HNRNPC-221ENST00000555883 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
HNRNPC-221ENST00000555883 PLSCR1O15162 318 aa17.87■□□□□ 0.45
HNRNPC-221ENST00000555883 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
HNRNPC-221ENST00000555883 R3HDM1Q15032 1099 aaKnown RBP17.86■□□□□ 0.45
HNRNPC-221ENST00000555883 ANKRD36BQ8N2N9 1353 aa17.86■□□□□ 0.45
HNRNPC-221ENST00000555883 NUP188Q5SRE5 1749 aa17.85■□□□□ 0.45
HNRNPC-221ENST00000555883 TNS2Q63HR2 1409 aa17.85■□□□□ 0.45
HNRNPC-221ENST00000555883 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
HNRNPC-221ENST00000555883 USP47Q96K76 1375 aa17.85■□□□□ 0.45
HNRNPC-221ENST00000555883 BCL11BQ9C0K0 894 aaPredicted RBP17.85■□□□□ 0.45
HNRNPC-221ENST00000555883 EXOC5O00471 708 aa17.84■□□□□ 0.45
HNRNPC-221ENST00000555883 TMF1P82094 1093 aa17.84■□□□□ 0.45
HNRNPC-221ENST00000555883 SBF2Q86WG5 1849 aa17.84■□□□□ 0.45
HNRNPC-221ENST00000555883 LTN1O94822 1766 aa17.84■□□□□ 0.45
HNRNPC-221ENST00000555883 NBPF14Q5TI25 921 aa17.83■□□□□ 0.44
HNRNPC-221ENST00000555883 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
HNRNPC-221ENST00000555883 ANKRD24Q8TF21 1146 aa17.81■□□□□ 0.44
HNRNPC-221ENST00000555883 IP6K1Q92551 441 aa17.81■□□□□ 0.44
HNRNPC-221ENST00000555883 COG3Q96JB2 828 aa17.81■□□□□ 0.44
HNRNPC-221ENST00000555883 IL2RBP14784 551 aa17.8■□□□□ 0.44
HNRNPC-221ENST00000555883 NLRP2Q9NX02 1062 aa17.8■□□□□ 0.44
HNRNPC-221ENST00000555883 FAM208AQ9UK61 1670 aaKnown RBP17.8■□□□□ 0.44
HNRNPC-221ENST00000555883 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
HNRNPC-221ENST00000555883 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
HNRNPC-221ENST00000555883 NHSQ6T4R5 1651 aa17.75■□□□□ 0.43
HNRNPC-221ENST00000555883 MSH5O43196 834 aa17.75■□□□□ 0.43
HNRNPC-221ENST00000555883 PTF1AQ7RTS3 328 aa17.75■□□□□ 0.43
HNRNPC-221ENST00000555883 FYB1O15117 783 aa17.74■□□□□ 0.43
HNRNPC-221ENST00000555883 HOXC9P31274 260 aa17.74■□□□□ 0.43
HNRNPC-221ENST00000555883 PROM2Q8N271 834 aa17.73■□□□□ 0.43
HNRNPC-221ENST00000555883 KIF24Q5T7B8 1368 aa17.73■□□□□ 0.43
HNRNPC-221ENST00000555883 AMPHP49418 695 aa17.71■□□□□ 0.43
HNRNPC-221ENST00000555883 TXNRD1Q16881 649 aa17.7■□□□□ 0.42
HNRNPC-221ENST00000555883 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
HNRNPC-221ENST00000555883 ANO8Q9HCE9 1232 aaPredicted RBP17.7■□□□□ 0.42
HNRNPC-221ENST00000555883 MYOM1P52179 1685 aa17.7■□□□□ 0.42
HNRNPC-221ENST00000555883 KCNQ2O43526 872 aa17.69■□□□□ 0.42
HNRNPC-221ENST00000555883 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
HNRNPC-221ENST00000555883 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
HNRNPC-221ENST00000555883 CASZ1Q86V15 1759 aa17.68■□□□□ 0.42
HNRNPC-221ENST00000555883 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
HNRNPC-221ENST00000555883 KIF20BQ96Q89 1820 aa17.67■□□□□ 0.42
HNRNPC-221ENST00000555883 INSRP06213 1382 aa17.66■□□□□ 0.42
HNRNPC-221ENST00000555883 FBLN1P23142 703 aa17.66■□□□□ 0.42
HNRNPC-221ENST00000555883 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
HNRNPC-221ENST00000555883 CARD14Q9BXL6 1004 aa17.66■□□□□ 0.42
HNRNPC-221ENST00000555883 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
HNRNPC-221ENST00000555883 FLT4P35916 1363 aa17.66■□□□□ 0.42
HNRNPC-221ENST00000555883 NSD3Q9BZ95 1437 aa17.65■□□□□ 0.42
HNRNPC-221ENST00000555883 RRS1Q15050 365 aaKnown RBP17.65■□□□□ 0.42
HNRNPC-221ENST00000555883 SLC15A2Q16348 729 aa17.65■□□□□ 0.42
HNRNPC-221ENST00000555883 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
HNRNPC-221ENST00000555883 STK32BQ9NY57 414 aa17.65■□□□□ 0.42
HNRNPC-221ENST00000555883 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
HNRNPC-221ENST00000555883 BTAF1O14981 1849 aa17.63■□□□□ 0.41
HNRNPC-221ENST00000555883 MEGF6O75095 1541 aa17.63■□□□□ 0.41
HNRNPC-221ENST00000555883 NBPF6Q5VWK0 638 aa17.63■□□□□ 0.41
HNRNPC-221ENST00000555883 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
HNRNPC-221ENST00000555883 NBPF4Q96M43 638 aa17.63■□□□□ 0.41
HNRNPC-221ENST00000555883 SLC27A3Q5K4L6 730 aa17.62■□□□□ 0.41
HNRNPC-221ENST00000555883 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
HNRNPC-221ENST00000555883 SHANK3Q9BYB0 1731 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms