RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 PURBQ96QR8 312 aaKnown RBP9.62□□□□□ -0.87
ATXN3-233ENST00000555816 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
ATXN3-233ENST00000555816 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATXN3-233ENST00000555816 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
ATXN3-233ENST00000555816 GPSM3Q9Y4H4 160 aa9.61□□□□□ -0.87
ATXN3-233ENST00000555816 PNMA1Q8ND90 353 aa9.6□□□□□ -0.87
ATXN3-233ENST00000555816 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
ATXN3-233ENST00000555816 FKBPLQ9UIM3 349 aa9.6□□□□□ -0.87
ATXN3-233ENST00000555816 NESP48681 1621 aa9.6□□□□□ -0.87
ATXN3-233ENST00000555816 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
ATXN3-233ENST00000555816 CCDC116Q8IYX3 515 aa9.59□□□□□ -0.87
ATXN3-233ENST00000555816 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
ATXN3-233ENST00000555816 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
ATXN3-233ENST00000555816 MAN1A2O60476 641 aa9.58□□□□□ -0.88
ATXN3-233ENST00000555816 ERFEQ4G0M1 354 aa9.58□□□□□ -0.88
ATXN3-233ENST00000555816 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
ATXN3-233ENST00000555816 FSHRP23945 695 aa9.57□□□□□ -0.88
ATXN3-233ENST00000555816 PTK2Q05397 1052 aa9.57□□□□□ -0.88
ATXN3-233ENST00000555816 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
ATXN3-233ENST00000555816 ARHGAP9Q9BRR9 750 aa9.57□□□□□ -0.88
ATXN3-233ENST00000555816 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
ATXN3-233ENST00000555816 VSIG8P0DPA2 414 aa9.56□□□□□ -0.88
ATXN3-233ENST00000555816 BMP2P12643 396 aa9.56□□□□□ -0.88
ATXN3-233ENST00000555816 GMPRP36959 345 aa9.56□□□□□ -0.88
ATXN3-233ENST00000555816 DHX9Q08211 1270 aaKnown RBP9.56□□□□□ -0.88
ATXN3-233ENST00000555816 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
ATXN3-233ENST00000555816 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
ATXN3-233ENST00000555816 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
ATXN3-233ENST00000555816 TRIM52Q96A61 297 aa9.55□□□□□ -0.88
ATXN3-233ENST00000555816 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-233ENST00000555816 HMGXB3Q12766 1538 aa9.55□□□□□ -0.88
ATXN3-233ENST00000555816 PROCA1Q8NCQ7 364 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-233ENST00000555816 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
ATXN3-233ENST00000555816 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
ATXN3-233ENST00000555816 CARD14Q9BXL6 1004 aa9.54□□□□□ -0.88
ATXN3-233ENST00000555816 SOS2Q07890 1332 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-233ENST00000555816 NR6A1Q15406 480 aa9.53□□□□□ -0.88
ATXN3-233ENST00000555816 C6orf118Q5T5N4 469 aa9.53□□□□□ -0.88
ATXN3-233ENST00000555816 Q6ZVU0 165 aa9.53□□□□□ -0.88
ATXN3-233ENST00000555816 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
ATXN3-233ENST00000555816 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-233ENST00000555816 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
ATXN3-233ENST00000555816 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-233ENST00000555816 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
ATXN3-233ENST00000555816 VEGFBP49765 207 aa9.51□□□□□ -0.89
ATXN3-233ENST00000555816 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.51□□□□□ -0.89
ATXN3-233ENST00000555816 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-233ENST00000555816 ERBB4Q15303 1308 aa9.51□□□□□ -0.89
ATXN3-233ENST00000555816 AP1G2O75843 785 aa9.5□□□□□ -0.89
ATXN3-233ENST00000555816 NBPF20Q3BBV1 942 aa9.5□□□□□ -0.89
ATXN3-233ENST00000555816 TMEM259Q4ZIN3 620 aa9.49□□□□□ -0.89
ATXN3-233ENST00000555816 TTLL8A6PVC2 850 aa9.48□□□□□ -0.89
ATXN3-233ENST00000555816 PPFIA3O75145 1194 aa9.48□□□□□ -0.89
ATXN3-233ENST00000555816 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
ATXN3-233ENST00000555816 LAMC3Q9Y6N6 1575 aa9.47□□□□□ -0.89
ATXN3-233ENST00000555816 SMARCA4P51532 1647 aa9.47□□□□□ -0.89
ATXN3-233ENST00000555816 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
ATXN3-233ENST00000555816 SPINT1O43278 529 aa9.47□□□□□ -0.89
ATXN3-233ENST00000555816 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-233ENST00000555816 RFC5P40937 340 aa9.46□□□□□ -0.9
ATXN3-233ENST00000555816 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-233ENST00000555816 CCDC125Q86Z20 511 aa9.46□□□□□ -0.9
ATXN3-233ENST00000555816 ADAM32Q8TC27 787 aa9.46□□□□□ -0.9
ATXN3-233ENST00000555816 PCMTD1Q96MG8 357 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-233ENST00000555816 DNMT3LQ9UJW3 386 aa9.46□□□□□ -0.9
ATXN3-233ENST00000555816 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.9
ATXN3-233ENST00000555816 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
ATXN3-233ENST00000555816 OCSTAMPQ9BR26 566 aa9.45□□□□□ -0.9
ATXN3-233ENST00000555816 SEPT12Q8IYM1 358 aa9.44□□□□□ -0.9
ATXN3-233ENST00000555816 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-233ENST00000555816 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
ATXN3-233ENST00000555816 DZIP3Q86Y13 1208 aaKnown RBP9.43□□□□□ -0.9
ATXN3-233ENST00000555816 CBLBQ13191 982 aa9.42□□□□□ -0.9
ATXN3-233ENST00000555816 NANOS1Q8WY41 292 aaKnown RBP9.42□□□□□ -0.9
ATXN3-233ENST00000555816 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
ATXN3-233ENST00000555816 ESPNB1AK53 854 aa9.4□□□□□ -0.9
ATXN3-233ENST00000555816 MCCD1P59942 119 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-233ENST00000555816 PTSQ03393 145 aa9.4□□□□□ -0.9
ATXN3-233ENST00000555816 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
ATXN3-233ENST00000555816 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-233ENST00000555816 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
ATXN3-233ENST00000555816 EPS8L1Q8TE68 723 aa9.39□□□□□ -0.91
ATXN3-233ENST00000555816 FIGNL2A6NMB9 653 aa9.37□□□□□ -0.91
ATXN3-233ENST00000555816 SOCS7O14512 581 aa9.37□□□□□ -0.91
ATXN3-233ENST00000555816 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
ATXN3-233ENST00000555816 SLC35F4A4IF30 521 aa9.36□□□□□ -0.91
ATXN3-233ENST00000555816 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
ATXN3-233ENST00000555816 ADH1AP07327 375 aa9.36□□□□□ -0.91
ATXN3-233ENST00000555816 TRIM34Q9BYJ4 488 aa9.36□□□□□ -0.91
ATXN3-233ENST00000555816 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
ATXN3-233ENST00000555816 MROH2BQ7Z745 1585 aa9.35□□□□□ -0.91
ATXN3-233ENST00000555816 ZNF784Q8NCA9 323 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-233ENST00000555816 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
ATXN3-233ENST00000555816 WDR62O43379 1518 aa9.35□□□□□ -0.91
ATXN3-233ENST00000555816 LILRA1O75019 489 aa9.34□□□□□ -0.91
ATXN3-233ENST00000555816 PTGIRP43119 386 aa9.34□□□□□ -0.91
ATXN3-233ENST00000555816 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-233ENST00000555816 RELBQ01201 579 aa9.34□□□□□ -0.91
ATXN3-233ENST00000555816 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
ATXN3-233ENST00000555816 RNF20Q5VTR2 975 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms