RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 NLRP13Q86W25 1043 aa15.7■□□□□ 0.1
TDP1-212ENST00000555565 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
TDP1-212ENST00000555565 AATKQ6ZMQ8 1374 aa15.69■□□□□ 0.1
TDP1-212ENST00000555565 SENP3-EIF4A1A0A087X0R7 540 aa15.68■□□□□ 0.1
TDP1-212ENST00000555565 SLC15A2Q16348 729 aa15.68■□□□□ 0.1
TDP1-212ENST00000555565 TXNRD1Q16881 649 aa15.68■□□□□ 0.1
TDP1-212ENST00000555565 KIAA1210Q9ULL0 1709 aa15.67■□□□□ 0.1
TDP1-212ENST00000555565 IFFO2Q5TF58 517 aa15.66■□□□□ 0.1
TDP1-212ENST00000555565 COL18A1P39060 1754 aa15.65■□□□□ 0.1
TDP1-212ENST00000555565 NBPF1Q3BBV0 1214 aa15.65■□□□□ 0.1
TDP1-212ENST00000555565 TOM1L2Q6ZVM7 507 aa15.65■□□□□ 0.1
TDP1-212ENST00000555565 MTFR1LQ9H019 292 aa15.65■□□□□ 0.1
TDP1-212ENST00000555565 SLIT3O75094 1523 aa15.64■□□□□ 0.09
TDP1-212ENST00000555565 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
TDP1-212ENST00000555565 WDR17Q8IZU2 1322 aa15.64■□□□□ 0.09
TDP1-212ENST00000555565 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
TDP1-212ENST00000555565 BRD4O60885 1362 aaPredicted RBP15.62■□□□□ 0.09
TDP1-212ENST00000555565 GOLGB1Q14789 3259 aaKnown RBP15.62■□□□□ 0.09
TDP1-212ENST00000555565 NLRP6P59044 892 aa15.62■□□□□ 0.09
TDP1-212ENST00000555565 CDCA7Q9BWT1 371 aaPredicted RBP15.62■□□□□ 0.09
TDP1-212ENST00000555565 MAP3K5Q99683 1374 aa15.62■□□□□ 0.09
TDP1-212ENST00000555565 CHD4Q14839 1912 aa15.61■□□□□ 0.09
TDP1-212ENST00000555565 ZBTB7CA1YPR0 619 aa15.61■□□□□ 0.09
TDP1-212ENST00000555565 ARXQ96QS3 562 aa15.61■□□□□ 0.09
TDP1-212ENST00000555565 CABP2Q9NPB3 220 aa15.61■□□□□ 0.09
TDP1-212ENST00000555565 USP6P35125 1406 aa15.6■□□□□ 0.09
TDP1-212ENST00000555565 ARHGEF25Q86VW2 580 aa15.6■□□□□ 0.09
TDP1-212ENST00000555565 L3MBTL2Q969R5 705 aa15.6■□□□□ 0.09
TDP1-212ENST00000555565 CARD10Q9BWT7 1032 aa15.6■□□□□ 0.09
TDP1-212ENST00000555565 CEP350Q5VT06 3117 aa15.6■□□□□ 0.09
TDP1-212ENST00000555565 WNK3Q9BYP7 1800 aa15.59■□□□□ 0.09
TDP1-212ENST00000555565 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
TDP1-212ENST00000555565 SRPK2P78362 688 aaKnown RBP15.58■□□□□ 0.08
TDP1-212ENST00000555565 SIN3AQ96ST3 1273 aa15.58■□□□□ 0.08
TDP1-212ENST00000555565 EXOC5O00471 708 aa15.57■□□□□ 0.08
TDP1-212ENST00000555565 PAPPAQ13219 1627 aa15.57■□□□□ 0.08
TDP1-212ENST00000555565 ZNF827Q17R98 1081 aa15.56■□□□□ 0.08
TDP1-212ENST00000555565 CENPJQ9HC77 1338 aaPredicted RBP15.56■□□□□ 0.08
TDP1-212ENST00000555565 CPSF1Q10570 1443 aaKnown RBP15.56■□□□□ 0.08
TDP1-212ENST00000555565 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
TDP1-212ENST00000555565 AKAP12Q02952 1782 aa15.56■□□□□ 0.08
TDP1-212ENST00000555565 LRRC4BQ9NT99 713 aa15.55■□□□□ 0.08
TDP1-212ENST00000555565 NEUROD1Q13562 356 aa15.53■□□□□ 0.08
TDP1-212ENST00000555565 GPR162Q16538 588 aa15.53■□□□□ 0.08
TDP1-212ENST00000555565 ACSBG1Q96GR2 724 aa15.53■□□□□ 0.08
TDP1-212ENST00000555565 RGPD5Q99666 1765 aa15.53■□□□□ 0.08
TDP1-212ENST00000555565 QRICH2Q9H0J4 1663 aa15.53■□□□□ 0.08
TDP1-212ENST00000555565 TRPM1Q7Z4N2 1603 aa15.53■□□□□ 0.08
TDP1-212ENST00000555565 TNS2Q63HR2 1409 aa15.52■□□□□ 0.08
TDP1-212ENST00000555565 NHSQ6T4R5 1651 aa15.52■□□□□ 0.08
TDP1-212ENST00000555565 GIGYF1O75420 1035 aaPredicted RBP15.52■□□□□ 0.08
TDP1-212ENST00000555565 AKT1S1Q96B36 256 aa15.52■□□□□ 0.08
TDP1-212ENST00000555565 CCDC7Q96M83 1385 aa15.51■□□□□ 0.07
TDP1-212ENST00000555565 TTC21BQ7Z4L5 1316 aa15.51■□□□□ 0.07
TDP1-212ENST00000555565 CSB-PGBD3P0DP91 1061 aa15.51■□□□□ 0.07
TDP1-212ENST00000555565 KCNH5Q8NCM2 988 aa15.51■□□□□ 0.07
TDP1-212ENST00000555565 SHANK3Q9BYB0 1731 aa15.5■□□□□ 0.07
TDP1-212ENST00000555565 NFAT5O94916 1531 aa15.49■□□□□ 0.07
TDP1-212ENST00000555565 COL24A1Q17RW2 1714 aa15.49■□□□□ 0.07
TDP1-212ENST00000555565 SLC16A10Q8TF71 515 aa15.49■□□□□ 0.07
TDP1-212ENST00000555565 SOX12O15370 315 aa15.48■□□□□ 0.07
TDP1-212ENST00000555565 NLGN2Q8NFZ4 835 aa15.48■□□□□ 0.07
TDP1-212ENST00000555565 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
TDP1-212ENST00000555565 ROCK2O75116 1388 aaKnown RBP15.48■□□□□ 0.07
TDP1-212ENST00000555565 ABCC6O95255 1503 aa15.48■□□□□ 0.07
TDP1-212ENST00000555565 PNPLA7Q6ZV29 1317 aa15.47■□□□□ 0.07
TDP1-212ENST00000555565 YBX3P16989 372 aaKnown RBP eCLIP15.46■□□□□ 0.07
TDP1-212ENST00000555565 ERBB3P21860 1342 aa15.45■□□□□ 0.06
TDP1-212ENST00000555565 BTAF1O14981 1849 aa15.45■□□□□ 0.06
TDP1-212ENST00000555565 EVC2Q86UK5 1308 aa15.44■□□□□ 0.06
TDP1-212ENST00000555565 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
TDP1-212ENST00000555565 IL2RBP14784 551 aa15.44■□□□□ 0.06
TDP1-212ENST00000555565 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
TDP1-212ENST00000555565 QSER1Q2KHR3 1735 aa15.43■□□□□ 0.06
TDP1-212ENST00000555565 POLD1P28340 1107 aa15.42■□□□□ 0.06
TDP1-212ENST00000555565 KCNQ4P56696 695 aa15.42■□□□□ 0.06
TDP1-212ENST00000555565 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
TDP1-212ENST00000555565 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
TDP1-212ENST00000555565 NLRP2Q9NX02 1062 aa15.42■□□□□ 0.06
TDP1-212ENST00000555565 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
TDP1-212ENST00000555565 GRIN3BO60391 1043 aa15.4■□□□□ 0.06
TDP1-212ENST00000555565 TFCP2L1Q9NZI6 479 aa15.39■□□□□ 0.05
TDP1-212ENST00000555565 ATP10DQ9P241 1426 aa15.38■□□□□ 0.05
TDP1-212ENST00000555565 ANKRD24Q8TF21 1146 aa15.38■□□□□ 0.05
TDP1-212ENST00000555565 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
TDP1-212ENST00000555565 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
TDP1-212ENST00000555565 NSD2O96028 1365 aa15.37■□□□□ 0.05
TDP1-212ENST00000555565 KTN1Q86UP2 1357 aaKnown RBP15.37■□□□□ 0.05
TDP1-212ENST00000555565 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
TDP1-212ENST00000555565 SBNO2Q9Y2G9 1366 aa15.37■□□□□ 0.05
TDP1-212ENST00000555565 COL23A1Q86Y22 540 aaPredicted RBP15.37■□□□□ 0.05
TDP1-212ENST00000555565 HSPA6P17066 643 aa15.36■□□□□ 0.05
TDP1-212ENST00000555565 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
TDP1-212ENST00000555565 NME9Q86XW9 330 aa15.36■□□□□ 0.05
TDP1-212ENST00000555565 DDX54Q8TDD1 881 aaKnown RBP15.36■□□□□ 0.05
TDP1-212ENST00000555565 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
TDP1-212ENST00000555565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.35■□□□□ 0.05
TDP1-212ENST00000555565 ADCY9O60503 1353 aa15.35■□□□□ 0.05
TDP1-212ENST00000555565 USP54Q70EL1 1684 aa15.35■□□□□ 0.05
TDP1-212ENST00000555565 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms