RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 ARHGEF25Q86VW2 580 aa18.1■□□□□ 0.49
PABPN1-205ENST00000555295 CDCA7Q9BWT1 371 aaPredicted RBP18.1■□□□□ 0.49
PABPN1-205ENST00000555295 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
PABPN1-205ENST00000555295 PARP4Q9UKK3 1724 aaKnown RBP18.09■□□□□ 0.49
PABPN1-205ENST00000555295 ABCC6O95255 1503 aa18.08■□□□□ 0.49
PABPN1-205ENST00000555295 EDC4Q6P2E9 1401 aaKnown RBP18.08■□□□□ 0.49
PABPN1-205ENST00000555295 APBA3O96018 575 aa18.08■□□□□ 0.48
PABPN1-205ENST00000555295 DDB1Q16531 1140 aa18.08■□□□□ 0.48
PABPN1-205ENST00000555295 USP31Q70CQ4 1352 aa18.07■□□□□ 0.48
PABPN1-205ENST00000555295 OVOS2A0A0G2JMS6 1433 aa18.06■□□□□ 0.48
PABPN1-205ENST00000555295 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
PABPN1-205ENST00000555295 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
PABPN1-205ENST00000555295 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
PABPN1-205ENST00000555295 SLC12A5Q9H2X9 1139 aa18.06■□□□□ 0.48
PABPN1-205ENST00000555295 NFAT5O94916 1531 aa18.06■□□□□ 0.48
PABPN1-205ENST00000555295 COL18A1P39060 1754 aa18.06■□□□□ 0.48
PABPN1-205ENST00000555295 NME9Q86XW9 330 aa18.05■□□□□ 0.48
PABPN1-205ENST00000555295 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
PABPN1-205ENST00000555295 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
PABPN1-205ENST00000555295 CD163L1Q9NR16 1453 aa18.05■□□□□ 0.48
PABPN1-205ENST00000555295 A0A1W2PP64 1363 aa18.04■□□□□ 0.48
PABPN1-205ENST00000555295 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
PABPN1-205ENST00000555295 PSDA5PKW4 1024 aaPredicted RBP18.04■□□□□ 0.48
PABPN1-205ENST00000555295 EZH2Q15910 746 aaKnown RBP18.04■□□□□ 0.48
PABPN1-205ENST00000555295 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
PABPN1-205ENST00000555295 LRRC37A3O60309 1634 aa18.03■□□□□ 0.48
PABPN1-205ENST00000555295 TMF1P82094 1093 aa18.02■□□□□ 0.48
PABPN1-205ENST00000555295 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.48
PABPN1-205ENST00000555295 TESK2Q96S53 571 aa18.02■□□□□ 0.48
PABPN1-205ENST00000555295 USP47Q96K76 1375 aa18.02■□□□□ 0.47
PABPN1-205ENST00000555295 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
PABPN1-205ENST00000555295 NBPF14Q5TI25 921 aa18.01■□□□□ 0.47
PABPN1-205ENST00000555295 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
PABPN1-205ENST00000555295 R3HDM1Q15032 1099 aaKnown RBP18■□□□□ 0.47
PABPN1-205ENST00000555295 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
PABPN1-205ENST00000555295 LRP5O75197 1615 aa18■□□□□ 0.47
PABPN1-205ENST00000555295 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
PABPN1-205ENST00000555295 EXOC5O00471 708 aa17.99■□□□□ 0.47
PABPN1-205ENST00000555295 COG3Q96JB2 828 aa17.99■□□□□ 0.47
PABPN1-205ENST00000555295 NLRP2Q9NX02 1062 aa17.99■□□□□ 0.47
PABPN1-205ENST00000555295 RGPD5Q99666 1765 aa17.99■□□□□ 0.47
PABPN1-205ENST00000555295 ERBB3P21860 1342 aa17.98■□□□□ 0.47
PABPN1-205ENST00000555295 LTN1O94822 1766 aa17.97■□□□□ 0.47
PABPN1-205ENST00000555295 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
PABPN1-205ENST00000555295 PEAK1Q9H792 1746 aa17.96■□□□□ 0.47
PABPN1-205ENST00000555295 ANKRD24Q8TF21 1146 aa17.95■□□□□ 0.46
PABPN1-205ENST00000555295 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
PABPN1-205ENST00000555295 RREB1Q92766 1687 aa17.95■□□□□ 0.46
PABPN1-205ENST00000555295 BCL9O00512 1426 aa17.95■□□□□ 0.46
PABPN1-205ENST00000555295 TNS2Q63HR2 1409 aa17.95■□□□□ 0.46
PABPN1-205ENST00000555295 MARCH10Q8NA82 808 aaPredicted RBP17.94■□□□□ 0.46
PABPN1-205ENST00000555295 PLSCR1O15162 318 aa17.93■□□□□ 0.46
PABPN1-205ENST00000555295 IL2RBP14784 551 aa17.93■□□□□ 0.46
PABPN1-205ENST00000555295 NUP188Q5SRE5 1749 aa17.92■□□□□ 0.46
PABPN1-205ENST00000555295 RGPD3A6NKT7 1758 aaPredicted RBP17.92■□□□□ 0.46
PABPN1-205ENST00000555295 RGPD4Q7Z3J3 1758 aa17.92■□□□□ 0.46
PABPN1-205ENST00000555295 IP6K1Q92551 441 aa17.92■□□□□ 0.46
PABPN1-205ENST00000555295 AMPHP49418 695 aa17.91■□□□□ 0.46
PABPN1-205ENST00000555295 FAM208AQ9UK61 1670 aaKnown RBP17.9■□□□□ 0.46
PABPN1-205ENST00000555295 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
PABPN1-205ENST00000555295 LTV1Q96GA3 475 aaPredicted RBP17.89■□□□□ 0.45
PABPN1-205ENST00000555295 SRCAPQ6ZRS2 3230 aa17.89■□□□□ 0.45
PABPN1-205ENST00000555295 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
PABPN1-205ENST00000555295 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
PABPN1-205ENST00000555295 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
PABPN1-205ENST00000555295 HOXC9P31274 260 aa17.86■□□□□ 0.45
PABPN1-205ENST00000555295 GGNBP2Q9H3C7 697 aa17.85■□□□□ 0.45
PABPN1-205ENST00000555295 FYB1O15117 783 aa17.84■□□□□ 0.45
PABPN1-205ENST00000555295 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
PABPN1-205ENST00000555295 SPON1Q9HCB6 807 aa17.84■□□□□ 0.45
PABPN1-205ENST00000555295 NHSQ6T4R5 1651 aa17.83■□□□□ 0.45
PABPN1-205ENST00000555295 PPP1R1BQ9UD71 204 aaPredicted RBP17.83■□□□□ 0.44
PABPN1-205ENST00000555295 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
PABPN1-205ENST00000555295 TXNRD1Q16881 649 aa17.82■□□□□ 0.44
PABPN1-205ENST00000555295 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
PABPN1-205ENST00000555295 ACSBG1Q96GR2 724 aa17.82■□□□□ 0.44
PABPN1-205ENST00000555295 STK32BQ9NY57 414 aa17.82■□□□□ 0.44
PABPN1-205ENST00000555295 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
PABPN1-205ENST00000555295 DDX54Q8TDD1 881 aaKnown RBP17.81■□□□□ 0.44
PABPN1-205ENST00000555295 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
PABPN1-205ENST00000555295 KIF24Q5T7B8 1368 aa17.8■□□□□ 0.44
PABPN1-205ENST00000555295 KCNQ2O43526 872 aa17.8■□□□□ 0.44
PABPN1-205ENST00000555295 FLT4P35916 1363 aa17.79■□□□□ 0.44
PABPN1-205ENST00000555295 RAPGEF4Q8WZA2 1011 aa17.79■□□□□ 0.44
PABPN1-205ENST00000555295 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
PABPN1-205ENST00000555295 CGNL1Q0VF96 1302 aa17.78■□□□□ 0.44
PABPN1-205ENST00000555295 MYOM1P52179 1685 aa17.78■□□□□ 0.44
PABPN1-205ENST00000555295 FBLN1P23142 703 aa17.78■□□□□ 0.44
PABPN1-205ENST00000555295 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
PABPN1-205ENST00000555295 ANO8Q9HCE9 1232 aaPredicted RBP17.78■□□□□ 0.44
PABPN1-205ENST00000555295 PROM2Q8N271 834 aa17.77■□□□□ 0.44
PABPN1-205ENST00000555295 ZCRB1Q8TBF4 217 aaKnown RBP17.77■□□□□ 0.44
PABPN1-205ENST00000555295 INSRP06213 1382 aa17.77■□□□□ 0.43
PABPN1-205ENST00000555295 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
PABPN1-205ENST00000555295 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
PABPN1-205ENST00000555295 ZEB1P37275 1124 aaPredicted RBP17.75■□□□□ 0.43
PABPN1-205ENST00000555295 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
PABPN1-205ENST00000555295 TATP17735 454 aaPredicted RBP17.74■□□□□ 0.43
PABPN1-205ENST00000555295 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
PABPN1-205ENST00000555295 BTAF1O14981 1849 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms