RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
TRAPPC6B-205ENST00000555269 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
TRAPPC6B-205ENST00000555269 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
TRAPPC6B-205ENST00000555269 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
TRAPPC6B-205ENST00000555269 NWD2Q9ULI1 1742 aa17.28■□□□□ 0.36
TRAPPC6B-205ENST00000555269 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC6B-205ENST00000555269 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
TRAPPC6B-205ENST00000555269 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.27■□□□□ 0.36
TRAPPC6B-205ENST00000555269 FYB1O15117 783 aa17.27■□□□□ 0.36
TRAPPC6B-205ENST00000555269 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
TRAPPC6B-205ENST00000555269 SLIT3O75094 1523 aa17.26■□□□□ 0.35
TRAPPC6B-205ENST00000555269 KRT27Q7Z3Y8 459 aa17.26■□□□□ 0.35
TRAPPC6B-205ENST00000555269 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
TRAPPC6B-205ENST00000555269 FAM182BQ5T319 152 aa17.25■□□□□ 0.35
TRAPPC6B-205ENST00000555269 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
TRAPPC6B-205ENST00000555269 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
TRAPPC6B-205ENST00000555269 COG3Q96JB2 828 aa17.24■□□□□ 0.35
TRAPPC6B-205ENST00000555269 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
TRAPPC6B-205ENST00000555269 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
TRAPPC6B-205ENST00000555269 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
TRAPPC6B-205ENST00000555269 CSB-PGBD3P0DP91 1061 aa17.21■□□□□ 0.35
TRAPPC6B-205ENST00000555269 BARGINQ6ZT62 677 aa17.21■□□□□ 0.35
TRAPPC6B-205ENST00000555269 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC6B-205ENST00000555269 EP400Q96L91 3159 aa17.2■□□□□ 0.34
TRAPPC6B-205ENST00000555269 LMO7Q8WWI1 1683 aa17.2■□□□□ 0.34
TRAPPC6B-205ENST00000555269 COL5A2P05997 1499 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC6B-205ENST00000555269 NFAT5O94916 1531 aa17.2■□□□□ 0.34
TRAPPC6B-205ENST00000555269 PANK3Q9H999 370 aa17.19■□□□□ 0.34
TRAPPC6B-205ENST00000555269 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
TRAPPC6B-205ENST00000555269 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
TRAPPC6B-205ENST00000555269 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
TRAPPC6B-205ENST00000555269 COL18A1P39060 1754 aa17.18■□□□□ 0.34
TRAPPC6B-205ENST00000555269 RRS1Q15050 365 aaKnown RBP17.18■□□□□ 0.34
TRAPPC6B-205ENST00000555269 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
TRAPPC6B-205ENST00000555269 CRB1P82279 1406 aa17.17■□□□□ 0.34
TRAPPC6B-205ENST00000555269 IP6K1Q92551 441 aa17.17■□□□□ 0.34
TRAPPC6B-205ENST00000555269 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC6B-205ENST00000555269 MAP3K19Q56UN5 1328 aa17.17■□□□□ 0.34
TRAPPC6B-205ENST00000555269 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
TRAPPC6B-205ENST00000555269 AMPHP49418 695 aa17.16■□□□□ 0.34
TRAPPC6B-205ENST00000555269 PDE3BQ13370 1112 aa17.16■□□□□ 0.34
TRAPPC6B-205ENST00000555269 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
TRAPPC6B-205ENST00000555269 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
TRAPPC6B-205ENST00000555269 NLRP2Q9NX02 1062 aa17.16■□□□□ 0.34
TRAPPC6B-205ENST00000555269 BRWD3Q6RI45 1802 aa17.16■□□□□ 0.34
TRAPPC6B-205ENST00000555269 CCDC125Q86Z20 511 aa17.15■□□□□ 0.34
TRAPPC6B-205ENST00000555269 HOXC9P31274 260 aa17.13■□□□□ 0.33
TRAPPC6B-205ENST00000555269 DEFB132Q7Z7B7 95 aa17.13■□□□□ 0.33
TRAPPC6B-205ENST00000555269 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
TRAPPC6B-205ENST00000555269 ERBB3P21860 1342 aa17.12■□□□□ 0.33
TRAPPC6B-205ENST00000555269 CGNL1Q0VF96 1302 aa17.12■□□□□ 0.33
TRAPPC6B-205ENST00000555269 RGPD5Q99666 1765 aa17.11■□□□□ 0.33
TRAPPC6B-205ENST00000555269 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
TRAPPC6B-205ENST00000555269 MYOM1P52179 1685 aa17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 TRIM37O94972 964 aa17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 DDB1Q16531 1140 aa17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
TRAPPC6B-205ENST00000555269 EMILIN1Q9Y6C2 1016 aa17.09■□□□□ 0.33
TRAPPC6B-205ENST00000555269 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC6B-205ENST00000555269 EXOC5O00471 708 aa17.08■□□□□ 0.32
TRAPPC6B-205ENST00000555269 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC6B-205ENST00000555269 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC6B-205ENST00000555269 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC6B-205ENST00000555269 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
TRAPPC6B-205ENST00000555269 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC6B-205ENST00000555269 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
TRAPPC6B-205ENST00000555269 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
TRAPPC6B-205ENST00000555269 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
TRAPPC6B-205ENST00000555269 WASHC2AQ641Q2 1341 aa17.05■□□□□ 0.32
TRAPPC6B-205ENST00000555269 IL2RBP14784 551 aa17.05■□□□□ 0.32
TRAPPC6B-205ENST00000555269 POLKQ9UBT6 870 aa17.05■□□□□ 0.32
TRAPPC6B-205ENST00000555269 LTN1O94822 1766 aa17.05■□□□□ 0.32
TRAPPC6B-205ENST00000555269 PTF1AQ7RTS3 328 aa17.04■□□□□ 0.32
TRAPPC6B-205ENST00000555269 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
TRAPPC6B-205ENST00000555269 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
TRAPPC6B-205ENST00000555269 ABCC6O95255 1503 aa17.03■□□□□ 0.32
TRAPPC6B-205ENST00000555269 APBA3O96018 575 aa17.03■□□□□ 0.32
TRAPPC6B-205ENST00000555269 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC6B-205ENST00000555269 BAG6P46379 1132 aa17.02■□□□□ 0.32
TRAPPC6B-205ENST00000555269 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
TRAPPC6B-205ENST00000555269 AMER1Q5JTC6 1135 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6B-205ENST00000555269 INSRP06213 1382 aa17.01■□□□□ 0.31
TRAPPC6B-205ENST00000555269 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
TRAPPC6B-205ENST00000555269 EZH2Q15910 746 aaKnown RBP17■□□□□ 0.31
TRAPPC6B-205ENST00000555269 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
TRAPPC6B-205ENST00000555269 RTL1A6NKG5 1358 aa17■□□□□ 0.31
TRAPPC6B-205ENST00000555269 FLT4P35916 1363 aa17■□□□□ 0.31
TRAPPC6B-205ENST00000555269 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
TRAPPC6B-205ENST00000555269 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
TRAPPC6B-205ENST00000555269 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
TRAPPC6B-205ENST00000555269 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
TRAPPC6B-205ENST00000555269 KCNQ2O43526 872 aa16.97■□□□□ 0.31
TRAPPC6B-205ENST00000555269 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
TRAPPC6B-205ENST00000555269 PEAK1Q9H792 1746 aa16.96■□□□□ 0.31
TRAPPC6B-205ENST00000555269 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
TRAPPC6B-205ENST00000555269 EYA1Q99502 592 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms