RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-214ENST00000555075 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
ACTN1-214ENST00000555075 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-214ENST00000555075 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
ACTN1-214ENST00000555075 GLI3P10071 1580 aa16.38■□□□□ 0.21
ACTN1-214ENST00000555075 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
ACTN1-214ENST00000555075 VPS72Q15906 364 aa16.38■□□□□ 0.21
ACTN1-214ENST00000555075 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
ACTN1-214ENST00000555075 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
ACTN1-214ENST00000555075 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
ACTN1-214ENST00000555075 CRYBG1Q9Y4K1 1723 aa16.37■□□□□ 0.21
ACTN1-214ENST00000555075 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
ACTN1-214ENST00000555075 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-214ENST00000555075 MAP3K19Q56UN5 1328 aa16.36■□□□□ 0.21
ACTN1-214ENST00000555075 NLRP2Q9NX02 1062 aa16.35■□□□□ 0.21
ACTN1-214ENST00000555075 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
ACTN1-214ENST00000555075 NFAT5O94916 1531 aa16.35■□□□□ 0.21
ACTN1-214ENST00000555075 FBLN1P23142 703 aa16.34■□□□□ 0.21
ACTN1-214ENST00000555075 IP6K1Q92551 441 aa16.34■□□□□ 0.21
ACTN1-214ENST00000555075 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
ACTN1-214ENST00000555075 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-214ENST00000555075 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
ACTN1-214ENST00000555075 ANKRD24Q8TF21 1146 aa16.33■□□□□ 0.2
ACTN1-214ENST00000555075 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
ACTN1-214ENST00000555075 RTL1A6NKG5 1358 aa16.32■□□□□ 0.2
ACTN1-214ENST00000555075 PER1O15534 1290 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-214ENST00000555075 HOXC9P31274 260 aa16.32■□□□□ 0.2
ACTN1-214ENST00000555075 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
ACTN1-214ENST00000555075 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
ACTN1-214ENST00000555075 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
ACTN1-214ENST00000555075 CAMTA1Q9Y6Y1 1673 aa16.31■□□□□ 0.2
ACTN1-214ENST00000555075 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-214ENST00000555075 FLT4P35916 1363 aa16.31■□□□□ 0.2
ACTN1-214ENST00000555075 SPATA31A5Q5VU36 1347 aa16.31■□□□□ 0.2
ACTN1-214ENST00000555075 SPATA31A7Q8IWB4 1347 aa16.31■□□□□ 0.2
ACTN1-214ENST00000555075 TCP11L2Q8N4U5 519 aa16.31■□□□□ 0.2
ACTN1-214ENST00000555075 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
ACTN1-214ENST00000555075 COL5A2P05997 1499 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-214ENST00000555075 CRB1P82279 1406 aa16.3■□□□□ 0.2
ACTN1-214ENST00000555075 EP400Q96L91 3159 aa16.3■□□□□ 0.2
ACTN1-214ENST00000555075 ABCC6O95255 1503 aa16.29■□□□□ 0.2
ACTN1-214ENST00000555075 KIF24Q5T7B8 1368 aa16.29■□□□□ 0.2
ACTN1-214ENST00000555075 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
ACTN1-214ENST00000555075 THRAP3Q9Y2W1 955 aaKnown RBP16.29■□□□□ 0.2
ACTN1-214ENST00000555075 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
ACTN1-214ENST00000555075 LTN1O94822 1766 aa16.28■□□□□ 0.2
ACTN1-214ENST00000555075 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
ACTN1-214ENST00000555075 SEPT12Q8IYM1 358 aa16.28■□□□□ 0.2
ACTN1-214ENST00000555075 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
ACTN1-214ENST00000555075 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
ACTN1-214ENST00000555075 ERBB3P21860 1342 aa16.27■□□□□ 0.2
ACTN1-214ENST00000555075 HSP90AB2PQ58FF8 381 aa16.27■□□□□ 0.2
ACTN1-214ENST00000555075 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
ACTN1-214ENST00000555075 CARD10Q9BWT7 1032 aa16.27■□□□□ 0.2
ACTN1-214ENST00000555075 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.19
ACTN1-214ENST00000555075 PDE3BQ13370 1112 aa16.26■□□□□ 0.19
ACTN1-214ENST00000555075 INSRP06213 1382 aa16.26■□□□□ 0.19
ACTN1-214ENST00000555075 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-214ENST00000555075 MTHFSP49914 203 aa16.24■□□□□ 0.19
ACTN1-214ENST00000555075 BARGINQ6ZT62 677 aa16.24■□□□□ 0.19
ACTN1-214ENST00000555075 ONECUT3O60422 494 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-214ENST00000555075 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
ACTN1-214ENST00000555075 RALBP1Q15311 655 aa16.22■□□□□ 0.19
ACTN1-214ENST00000555075 KRT27Q7Z3Y8 459 aa16.22■□□□□ 0.19
ACTN1-214ENST00000555075 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
ACTN1-214ENST00000555075 COL18A1P39060 1754 aa16.22■□□□□ 0.19
ACTN1-214ENST00000555075 EXOC5O00471 708 aa16.21■□□□□ 0.19
ACTN1-214ENST00000555075 IL2RBP14784 551 aa16.21■□□□□ 0.19
ACTN1-214ENST00000555075 DDB1Q16531 1140 aa16.21■□□□□ 0.19
ACTN1-214ENST00000555075 TATP17735 454 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-214ENST00000555075 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
ACTN1-214ENST00000555075 RGPD5Q99666 1765 aa16.2■□□□□ 0.18
ACTN1-214ENST00000555075 THSD7AQ9UPZ6 1657 aa16.19■□□□□ 0.18
ACTN1-214ENST00000555075 DIAPH1O60610 1272 aaKnown RBP16.19■□□□□ 0.18
ACTN1-214ENST00000555075 SF3B2Q13435 895 aaKnown RBP16.19■□□□□ 0.18
ACTN1-214ENST00000555075 EIF4A2Q14240 407 aaKnown RBP16.19■□□□□ 0.18
ACTN1-214ENST00000555075 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
ACTN1-214ENST00000555075 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
ACTN1-214ENST00000555075 U2SURPO15042 1029 aaKnown RBP16.18■□□□□ 0.18
ACTN1-214ENST00000555075 PPP2R1AP30153 589 aa16.18■□□□□ 0.18
ACTN1-214ENST00000555075 NBPF6Q5VWK0 638 aa16.18■□□□□ 0.18
ACTN1-214ENST00000555075 NBPF4Q96M43 638 aa16.18■□□□□ 0.18
ACTN1-214ENST00000555075 ANP32CO43423 234 aa16.17■□□□□ 0.18
ACTN1-214ENST00000555075 FAM208AQ9UK61 1670 aaKnown RBP16.17■□□□□ 0.18
ACTN1-214ENST00000555075 PEAK1Q9H792 1746 aa16.16■□□□□ 0.18
ACTN1-214ENST00000555075 DEFB132Q7Z7B7 95 aa16.16■□□□□ 0.18
ACTN1-214ENST00000555075 EYA1Q99502 592 aa16.16■□□□□ 0.18
ACTN1-214ENST00000555075 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
ACTN1-214ENST00000555075 DDX54Q8TDD1 881 aaKnown RBP16.14■□□□□ 0.17
ACTN1-214ENST00000555075 MYBBP1AQ9BQG0 1328 aaKnown RBP16.14■□□□□ 0.17
ACTN1-214ENST00000555075 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
ACTN1-214ENST00000555075 NEFMP07197 916 aa16.13■□□□□ 0.17
ACTN1-214ENST00000555075 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
ACTN1-214ENST00000555075 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
ACTN1-214ENST00000555075 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
ACTN1-214ENST00000555075 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
ACTN1-214ENST00000555075 RGPD1P0DJD0 1748 aa16.11■□□□□ 0.17
ACTN1-214ENST00000555075 IL13P35225 146 aa16.11■□□□□ 0.17
ACTN1-214ENST00000555075 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
ACTN1-214ENST00000555075 BAG6P46379 1132 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 224.7 ms