RNA–Protein interactions for RNA: ENST00000555015.5

SRP54-AS1-202, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-202ENST00000555015 VPS72Q15906 364 aa17.69■□□□□ 0.42
SRP54-AS1-202ENST00000555015 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
SRP54-AS1-202ENST00000555015 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
SRP54-AS1-202ENST00000555015 RGS12O14924 1447 aa17.68■□□□□ 0.42
SRP54-AS1-202ENST00000555015 RXRBP28702 533 aa17.68■□□□□ 0.42
SRP54-AS1-202ENST00000555015 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
SRP54-AS1-202ENST00000555015 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
SRP54-AS1-202ENST00000555015 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
SRP54-AS1-202ENST00000555015 GJD4Q96KN9 370 aaPredicted RBP17.66■□□□□ 0.42
SRP54-AS1-202ENST00000555015 PEAK1Q9H792 1746 aa17.66■□□□□ 0.42
SRP54-AS1-202ENST00000555015 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
SRP54-AS1-202ENST00000555015 BLMP54132 1417 aaPredicted RBP17.65■□□□□ 0.42
SRP54-AS1-202ENST00000555015 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
SRP54-AS1-202ENST00000555015 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
SRP54-AS1-202ENST00000555015 STRN4Q9NRL3 753 aa17.64■□□□□ 0.41
SRP54-AS1-202ENST00000555015 MAP3K19Q56UN5 1328 aa17.64■□□□□ 0.41
SRP54-AS1-202ENST00000555015 KIF24Q5T7B8 1368 aa17.64■□□□□ 0.41
SRP54-AS1-202ENST00000555015 NPC1L1Q9UHC9 1359 aa17.64■□□□□ 0.41
SRP54-AS1-202ENST00000555015 EVA1CP58658 441 aa17.63■□□□□ 0.41
SRP54-AS1-202ENST00000555015 AXIN2Q9Y2T1 843 aa17.63■□□□□ 0.41
SRP54-AS1-202ENST00000555015 SPATA31A5Q5VU36 1347 aa17.63■□□□□ 0.41
SRP54-AS1-202ENST00000555015 SPATA31A7Q8IWB4 1347 aa17.63■□□□□ 0.41
SRP54-AS1-202ENST00000555015 CRB1P82279 1406 aa17.63■□□□□ 0.41
SRP54-AS1-202ENST00000555015 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
SRP54-AS1-202ENST00000555015 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
SRP54-AS1-202ENST00000555015 BRWD3Q6RI45 1802 aa17.61■□□□□ 0.41
SRP54-AS1-202ENST00000555015 FBLN1P23142 703 aa17.61■□□□□ 0.41
SRP54-AS1-202ENST00000555015 IP6K1Q92551 441 aa17.61■□□□□ 0.41
SRP54-AS1-202ENST00000555015 SPATA31A1Q5TZJ5 1347 aa17.61■□□□□ 0.41
SRP54-AS1-202ENST00000555015 WDR17Q8IZU2 1322 aa17.61■□□□□ 0.41
SRP54-AS1-202ENST00000555015 AMPHP49418 695 aa17.6■□□□□ 0.41
SRP54-AS1-202ENST00000555015 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
SRP54-AS1-202ENST00000555015 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
SRP54-AS1-202ENST00000555015 ERBB3P21860 1342 aa17.6■□□□□ 0.41
SRP54-AS1-202ENST00000555015 FLT4P35916 1363 aa17.6■□□□□ 0.41
SRP54-AS1-202ENST00000555015 SMG6Q86US8 1419 aaKnown RBP17.6■□□□□ 0.41
SRP54-AS1-202ENST00000555015 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
SRP54-AS1-202ENST00000555015 PARP4Q9UKK3 1724 aaKnown RBP17.59■□□□□ 0.41
SRP54-AS1-202ENST00000555015 HOXC9P31274 260 aa17.59■□□□□ 0.41
SRP54-AS1-202ENST00000555015 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
SRP54-AS1-202ENST00000555015 ONECUT3O60422 494 aaPredicted RBP17.57■□□□□ 0.4
SRP54-AS1-202ENST00000555015 EP400Q96L91 3159 aa17.57■□□□□ 0.4
SRP54-AS1-202ENST00000555015 INSRP06213 1382 aa17.56■□□□□ 0.4
SRP54-AS1-202ENST00000555015 CSB-PGBD3P0DP91 1061 aa17.56■□□□□ 0.4
SRP54-AS1-202ENST00000555015 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
SRP54-AS1-202ENST00000555015 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
SRP54-AS1-202ENST00000555015 ANKRD24Q8TF21 1146 aa17.56■□□□□ 0.4
SRP54-AS1-202ENST00000555015 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
SRP54-AS1-202ENST00000555015 EMILIN1Q9Y6C2 1016 aa17.56■□□□□ 0.4
SRP54-AS1-202ENST00000555015 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
SRP54-AS1-202ENST00000555015 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
SRP54-AS1-202ENST00000555015 TCP11L2Q8N4U5 519 aa17.55■□□□□ 0.4
SRP54-AS1-202ENST00000555015 POLKQ9UBT6 870 aa17.55■□□□□ 0.4
SRP54-AS1-202ENST00000555015 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
SRP54-AS1-202ENST00000555015 FAM98CQ17RN3 349 aaKnown RBP17.54■□□□□ 0.4
SRP54-AS1-202ENST00000555015 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
SRP54-AS1-202ENST00000555015 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
SRP54-AS1-202ENST00000555015 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
SRP54-AS1-202ENST00000555015 PPM1GO15355 546 aaPredicted RBP17.52■□□□□ 0.4
SRP54-AS1-202ENST00000555015 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
SRP54-AS1-202ENST00000555015 SEPT12Q8IYM1 358 aa17.52■□□□□ 0.4
SRP54-AS1-202ENST00000555015 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
SRP54-AS1-202ENST00000555015 LTV1Q96GA3 475 aaPredicted RBP17.51■□□□□ 0.39
SRP54-AS1-202ENST00000555015 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
SRP54-AS1-202ENST00000555015 DISP2A7MBM2 1401 aa17.5■□□□□ 0.39
SRP54-AS1-202ENST00000555015 A0A0G2JS52 829 aa17.5■□□□□ 0.39
SRP54-AS1-202ENST00000555015 MYT1Q01538 1121 aa17.5■□□□□ 0.39
SRP54-AS1-202ENST00000555015 CDCA7Q9BWT1 371 aaPredicted RBP17.49■□□□□ 0.39
SRP54-AS1-202ENST00000555015 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
SRP54-AS1-202ENST00000555015 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
SRP54-AS1-202ENST00000555015 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
SRP54-AS1-202ENST00000555015 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
SRP54-AS1-202ENST00000555015 NBPF6Q5VWK0 638 aa17.45■□□□□ 0.38
SRP54-AS1-202ENST00000555015 KRT27Q7Z3Y8 459 aa17.45■□□□□ 0.38
SRP54-AS1-202ENST00000555015 NBPF4Q96M43 638 aa17.45■□□□□ 0.38
SRP54-AS1-202ENST00000555015 TNS2Q63HR2 1409 aa17.45■□□□□ 0.38
SRP54-AS1-202ENST00000555015 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
SRP54-AS1-202ENST00000555015 IL2RBP14784 551 aa17.44■□□□□ 0.38
SRP54-AS1-202ENST00000555015 MTHFSP49914 203 aa17.44■□□□□ 0.38
SRP54-AS1-202ENST00000555015 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
SRP54-AS1-202ENST00000555015 COL3A1P02461 1466 aaPredicted RBP17.44■□□□□ 0.38
SRP54-AS1-202ENST00000555015 PKD1L3Q7Z443 1732 aa17.43■□□□□ 0.38
SRP54-AS1-202ENST00000555015 MEGF6O75095 1541 aa17.42■□□□□ 0.38
SRP54-AS1-202ENST00000555015 DDB1Q16531 1140 aa17.42■□□□□ 0.38
SRP54-AS1-202ENST00000555015 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
SRP54-AS1-202ENST00000555015 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
SRP54-AS1-202ENST00000555015 PDE3BQ13370 1112 aa17.41■□□□□ 0.38
SRP54-AS1-202ENST00000555015 SBF2Q86WG5 1849 aa17.41■□□□□ 0.38
SRP54-AS1-202ENST00000555015 RALBP1Q15311 655 aa17.4■□□□□ 0.38
SRP54-AS1-202ENST00000555015 USHBP1Q8N6Y0 703 aa17.4■□□□□ 0.38
SRP54-AS1-202ENST00000555015 EYA1Q99502 592 aa17.4■□□□□ 0.38
SRP54-AS1-202ENST00000555015 IGSF1Q8N6C5 1336 aa17.4■□□□□ 0.38
SRP54-AS1-202ENST00000555015 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
SRP54-AS1-202ENST00000555015 SRCAPQ6ZRS2 3230 aa17.39■□□□□ 0.37
SRP54-AS1-202ENST00000555015 EXOC5O00471 708 aa17.38■□□□□ 0.37
SRP54-AS1-202ENST00000555015 IL13P35225 146 aa17.38■□□□□ 0.37
SRP54-AS1-202ENST00000555015 RAPGEF4Q8WZA2 1011 aa17.38■□□□□ 0.37
SRP54-AS1-202ENST00000555015 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
SRP54-AS1-202ENST00000555015 CFAP53Q96M91 514 aa17.37■□□□□ 0.37
SRP54-AS1-202ENST00000555015 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms