RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, human

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDR39U1-209	ENST00000554947	NSD2	O96028	1365 aa		33.3	■■■□□ 2.92
SDR39U1-209	ENST00000554947	ZBTB7C	A1YPR0	619 aa		33.28	■■■□□ 2.92
SDR39U1-209	ENST00000554947	EVA1C	P58658	441 aa		33.28	■■■□□ 2.92
SDR39U1-209	ENST00000554947	KNSTRN	Q9Y448	316 aa		33.27	■■■□□ 2.92
SDR39U1-209	ENST00000554947	SPATA31A5	Q5VU36	1347 aa		33.27	■■■□□ 2.92
SDR39U1-209	ENST00000554947	SPATA31A7	Q8IWB4	1347 aa		33.27	■■■□□ 2.92
SDR39U1-209	ENST00000554947	STRN4	Q9NRL3	753 aa		33.26	■■■□□ 2.91
SDR39U1-209	ENST00000554947	AXIN2	Q9Y2T1	843 aa		33.25	■■■□□ 2.91
SDR39U1-209	ENST00000554947	CCDC9	Q9Y3X0	531 aa	Known RBP	33.25	■■■□□ 2.91
SDR39U1-209	ENST00000554947	RGS12	O14924	1447 aa		33.24	■■■□□ 2.91
SDR39U1-209	ENST00000554947	ONECUT3	O60422	494 aa	Predicted RBP	33.22	■■■□□ 2.91
SDR39U1-209	ENST00000554947	SPATA31A1	Q5TZJ5	1347 aa		33.22	■■■□□ 2.91
SDR39U1-209	ENST00000554947	BLM	P54132	1417 aa	Predicted RBP	33.21	■■■□□ 2.91
SDR39U1-209	ENST00000554947	PER1	O15534	1290 aa	Predicted RBP	33.21	■■■□□ 2.91
SDR39U1-209	ENST00000554947	RTL1	A6NKG5	1358 aa		33.21	■■■□□ 2.91
SDR39U1-209	ENST00000554947	IP6K1	Q92551	441 aa		33.2	■■■□□ 2.91
SDR39U1-209	ENST00000554947	MAP2	P11137	1827 aa	Known RBP	33.2	■■■□□ 2.91
SDR39U1-209	ENST00000554947	MAP3K19	Q56UN5	1328 aa		33.2	■■■□□ 2.91
SDR39U1-209	ENST00000554947	KIF24	Q5T7B8	1368 aa		33.2	■■■□□ 2.9
SDR39U1-209	ENST00000554947	CRB1	P82279	1406 aa		33.19	■■■□□ 2.9
SDR39U1-209	ENST00000554947	LARP1	Q6PKG0	1096 aa	Known RBP	33.19	■■■□□ 2.9
SDR39U1-209	ENST00000554947	WDR17	Q8IZU2	1322 aa		33.19	■■■□□ 2.9
SDR39U1-209	ENST00000554947	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.17	■■■□□ 2.9
SDR39U1-209	ENST00000554947	THRAP3	Q9Y2W1	955 aa	Known RBP	33.16	■■■□□ 2.9
SDR39U1-209	ENST00000554947	FBLN1	P23142	703 aa		33.15	■■■□□ 2.9
SDR39U1-209	ENST00000554947	FAM208A	Q9UK61	1670 aa	Known RBP	33.14	■■■□□ 2.9
SDR39U1-209	ENST00000554947	NPC1L1	Q9UHC9	1359 aa		33.14	■■■□□ 2.9
SDR39U1-209	ENST00000554947	ERBB3	P21860	1342 aa		33.14	■■■□□ 2.9
SDR39U1-209	ENST00000554947	AMPH	P49418	695 aa		33.14	■■■□□ 2.9
SDR39U1-209	ENST00000554947	HOXC9	P31274	260 aa		33.13	■■■□□ 2.89
SDR39U1-209	ENST00000554947	RRS1	Q15050	365 aa	Known RBP	33.13	■■■□□ 2.89
SDR39U1-209	ENST00000554947	BARGIN	Q6ZT62	677 aa		33.13	■■■□□ 2.89
SDR39U1-209	ENST00000554947	THSD7A	Q9UPZ6	1657 aa		33.13	■■■□□ 2.89
SDR39U1-209	ENST00000554947	TCP11L2	Q8N4U5	519 aa		33.12	■■■□□ 2.89
SDR39U1-209	ENST00000554947	BRWD3	Q6RI45	1802 aa		33.12	■■■□□ 2.89
SDR39U1-209	ENST00000554947	SOCS7	O14512	581 aa		33.11	■■■□□ 2.89
SDR39U1-209	ENST00000554947	TOM1L2	Q6ZVM7	507 aa		33.11	■■■□□ 2.89
SDR39U1-209	ENST00000554947	FAM98C	Q17RN3	349 aa	Known RBP	33.1	■■■□□ 2.89
SDR39U1-209	ENST00000554947	SEPT12	Q8IYM1	358 aa		33.1	■■■□□ 2.89
SDR39U1-209	ENST00000554947	CARD10	Q9BWT7	1032 aa		33.1	■■■□□ 2.89
SDR39U1-209	ENST00000554947	PEAK1	Q9H792	1746 aa		33.1	■■■□□ 2.89
SDR39U1-209	ENST00000554947	FLT4	P35916	1363 aa		33.09	■■■□□ 2.89
SDR39U1-209	ENST00000554947	CSB-PGBD3	P0DP91	1061 aa		33.09	■■■□□ 2.89
SDR39U1-209	ENST00000554947	MORC1	Q86VD1	984 aa		33.09	■■■□□ 2.89
SDR39U1-209	ENST00000554947	ANKRD24	Q8TF21	1146 aa		33.09	■■■□□ 2.89
SDR39U1-209	ENST00000554947	WNK3	Q9BYP7	1800 aa		33.07	■■■□□ 2.89
SDR39U1-209	ENST00000554947	USP35	Q9P2H5	1018 aa		33.07	■■■□□ 2.88
SDR39U1-209	ENST00000554947	INSR	P06213	1382 aa		33.06	■■■□□ 2.88
SDR39U1-209	ENST00000554947	POLK	Q9UBT6	870 aa		33.04	■■■□□ 2.88
SDR39U1-209	ENST00000554947	EMILIN1	Q9Y6C2	1016 aa		33.04	■■■□□ 2.88
SDR39U1-209	ENST00000554947	PARP4	Q9UKK3	1724 aa	Known RBP	33.04	■■■□□ 2.88
SDR39U1-209	ENST00000554947	SMG6	Q86US8	1419 aa	Known RBP	33.02	■■■□□ 2.88
SDR39U1-209	ENST00000554947	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.01	■■■□□ 2.87
SDR39U1-209	ENST00000554947	TNNT2	P45379	298 aa	Predicted RBP	33	■■■□□ 2.87
SDR39U1-209	ENST00000554947		A0A0G2JS52	829 aa		32.99	■■■□□ 2.87
SDR39U1-209	ENST00000554947	MYT1	Q01538	1121 aa		32.99	■■■□□ 2.87
SDR39U1-209	ENST00000554947	NLRP2	Q9NX02	1062 aa		32.99	■■■□□ 2.87
SDR39U1-209	ENST00000554947	RGPD2	P0DJD1	1756 aa		32.98	■■■□□ 2.87
SDR39U1-209	ENST00000554947	HSP90AB2P	Q58FF8	381 aa		32.98	■■■□□ 2.87
SDR39U1-209	ENST00000554947	CC2D1B	Q5T0F9	858 aa	Known RBP	32.97	■■■□□ 2.87
SDR39U1-209	ENST00000554947	KRT27	Q7Z3Y8	459 aa		32.97	■■■□□ 2.87
SDR39U1-209	ENST00000554947	LTV1	Q96GA3	475 aa	Predicted RBP	32.96	■■■□□ 2.87
SDR39U1-209	ENST00000554947	DISP2	A7MBM2	1401 aa		32.95	■■■□□ 2.87
SDR39U1-209	ENST00000554947	PPM1G	O15355	546 aa	Predicted RBP	32.95	■■■□□ 2.87
SDR39U1-209	ENST00000554947	LRRC37A3	O60309	1634 aa		32.91	■■■□□ 2.86
SDR39U1-209	ENST00000554947	IL2RB	P14784	551 aa		32.88	■■■□□ 2.85
SDR39U1-209	ENST00000554947	PDE3B	Q13370	1112 aa		32.87	■■■□□ 2.85
SDR39U1-209	ENST00000554947	DDB1	Q16531	1140 aa		32.86	■■■□□ 2.85
SDR39U1-209	ENST00000554947	NBPF6	Q5VWK0	638 aa		32.86	■■■□□ 2.85
SDR39U1-209	ENST00000554947	NBPF4	Q96M43	638 aa		32.86	■■■□□ 2.85
SDR39U1-209	ENST00000554947	DDX10	Q13206	875 aa	Known RBP	32.85	■■■□□ 2.85
SDR39U1-209	ENST00000554947	NCAPD2	Q15021	1401 aa		32.85	■■■□□ 2.85
SDR39U1-209	ENST00000554947	EP400	Q96L91	3159 aa		32.84	■■■□□ 2.85
SDR39U1-209	ENST00000554947	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
SDR39U1-209	ENST00000554947	EIF4A2	Q14240	407 aa	Known RBP	32.82	■■■□□ 2.84
SDR39U1-209	ENST00000554947	TNS2	Q63HR2	1409 aa		32.82	■■■□□ 2.84
SDR39U1-209	ENST00000554947	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.81	■■■□□ 2.84
SDR39U1-209	ENST00000554947	EXOC5	O00471	708 aa		32.81	■■■□□ 2.84
SDR39U1-209	ENST00000554947	MTHFS	P49914	203 aa		32.81	■■■□□ 2.84
SDR39U1-209	ENST00000554947	CCDC125	Q86Z20	511 aa		32.79	■■■□□ 2.84
SDR39U1-209	ENST00000554947	FAM196A	Q6ZSG2	479 aa		32.78	■■■□□ 2.84
SDR39U1-209	ENST00000554947	CNGB1	Q14028	1251 aa	Predicted RBP	32.77	■■■□□ 2.84
SDR39U1-209	ENST00000554947	EYA1	Q99502	592 aa		32.77	■■■□□ 2.84
SDR39U1-209	ENST00000554947	OVOS2	A0A0G2JMS6	1433 aa		32.76	■■■□□ 2.83
SDR39U1-209	ENST00000554947	PARD3	Q8TEW0	1356 aa		32.75	■■■□□ 2.83
SDR39U1-209	ENST00000554947	BCL9	O00512	1426 aa		32.75	■■■□□ 2.83
SDR39U1-209	ENST00000554947	MEGF6	O75095	1541 aa		32.74	■■■□□ 2.83
SDR39U1-209	ENST00000554947	USHBP1	Q8N6Y0	703 aa		32.74	■■■□□ 2.83
SDR39U1-209	ENST00000554947	RAPGEF4	Q8WZA2	1011 aa		32.74	■■■□□ 2.83
SDR39U1-209	ENST00000554947	IGSF1	Q8N6C5	1336 aa		32.74	■■■□□ 2.83
SDR39U1-209	ENST00000554947	RGPD1	P0DJD0	1748 aa		32.74	■■■□□ 2.83
SDR39U1-209	ENST00000554947	PLEKHG2	Q9H7P9	1386 aa		32.73	■■■□□ 2.83
SDR39U1-209	ENST00000554947	FAM182B	Q5T319	152 aa		32.72	■■■□□ 2.83
SDR39U1-209	ENST00000554947	SBF2	Q86WG5	1849 aa		32.72	■■■□□ 2.83
SDR39U1-209	ENST00000554947	TAT	P17735	454 aa	Predicted RBP	32.71	■■■□□ 2.83
SDR39U1-209	ENST00000554947	IL13	P35225	146 aa		32.71	■■■□□ 2.83
SDR39U1-209	ENST00000554947	MARCH10	Q8NA82	808 aa	Predicted RBP	32.71	■■■□□ 2.83
SDR39U1-209	ENST00000554947	SHANK3	Q9BYB0	1731 aa		32.71	■■■□□ 2.83
SDR39U1-209	ENST00000554947	PPP2R1A	P30153	589 aa		32.7	■■■□□ 2.83
SDR39U1-209	ENST00000554947	COL3A1	P02461	1466 aa	Predicted RBP	32.68	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms