RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 FLT4P35916 1363 aa10.92□□□□□ -0.66
LINC01397-201ENST00000554808 KIAA0232Q92628 1395 aa10.92□□□□□ -0.66
LINC01397-201ENST00000554808 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
LINC01397-201ENST00000554808 PRDM11Q9NQV5 511 aa10.92□□□□□ -0.66
LINC01397-201ENST00000554808 BRWD3Q6RI45 1802 aa10.91□□□□□ -0.66
LINC01397-201ENST00000554808 ARHGEF25Q86VW2 580 aa10.91□□□□□ -0.66
LINC01397-201ENST00000554808 CABLES1Q8TDN4 633 aa10.91□□□□□ -0.66
LINC01397-201ENST00000554808 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
LINC01397-201ENST00000554808 RGPD1P0DJD0 1748 aa10.9□□□□□ -0.66
LINC01397-201ENST00000554808 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
LINC01397-201ENST00000554808 C8orf37Q96NL8 207 aa10.9□□□□□ -0.66
LINC01397-201ENST00000554808 ANP32CO43423 234 aa10.89□□□□□ -0.67
LINC01397-201ENST00000554808 ADAMTS2O95450 1211 aa10.89□□□□□ -0.67
LINC01397-201ENST00000554808 ZC3H6P61129 1189 aaKnown RBP10.89□□□□□ -0.67
LINC01397-201ENST00000554808 INSRP06213 1382 aa10.89□□□□□ -0.67
LINC01397-201ENST00000554808 MAP3K19Q56UN5 1328 aa10.88□□□□□ -0.67
LINC01397-201ENST00000554808 MYBBP1AQ9BQG0 1328 aaKnown RBP10.88□□□□□ -0.67
LINC01397-201ENST00000554808 ATRNO75882 1429 aa10.88□□□□□ -0.67
LINC01397-201ENST00000554808 AMPHP49418 695 aa10.88□□□□□ -0.67
LINC01397-201ENST00000554808 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
LINC01397-201ENST00000554808 IP6K1Q92551 441 aa10.88□□□□□ -0.67
LINC01397-201ENST00000554808 NGLY1Q96IV0 654 aa10.88□□□□□ -0.67
LINC01397-201ENST00000554808 SOX12O15370 315 aa10.87□□□□□ -0.67
LINC01397-201ENST00000554808 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
LINC01397-201ENST00000554808 HOXC9P31274 260 aa10.87□□□□□ -0.67
LINC01397-201ENST00000554808 RBM6P78332 1123 aaKnown RBP10.87□□□□□ -0.67
LINC01397-201ENST00000554808 CFAP53Q96M91 514 aa10.87□□□□□ -0.67
LINC01397-201ENST00000554808 PRKRIP1Q9H875 184 aaPredicted RBP10.87□□□□□ -0.67
LINC01397-201ENST00000554808 POLKQ9UBT6 870 aa10.87□□□□□ -0.67
LINC01397-201ENST00000554808 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
LINC01397-201ENST00000554808 GLI3P10071 1580 aa10.86□□□□□ -0.67
LINC01397-201ENST00000554808 CRB1P82279 1406 aa10.86□□□□□ -0.67
LINC01397-201ENST00000554808 FAM83GA6ND36 823 aa10.86□□□□□ -0.67
LINC01397-201ENST00000554808 RRS1Q15050 365 aaKnown RBP10.86□□□□□ -0.67
LINC01397-201ENST00000554808 PLEKHG2Q9H7P9 1386 aa10.86□□□□□ -0.67
LINC01397-201ENST00000554808 PKD1L3Q7Z443 1732 aa10.86□□□□□ -0.67
LINC01397-201ENST00000554808 ERBB3P21860 1342 aa10.85□□□□□ -0.67
LINC01397-201ENST00000554808 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
LINC01397-201ENST00000554808 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
LINC01397-201ENST00000554808 QTRT2Q9H974 415 aaKnown RBP10.85□□□□□ -0.67
LINC01397-201ENST00000554808 BTG4Q9NY30 223 aa10.85□□□□□ -0.67
LINC01397-201ENST00000554808 USP21Q9UK80 565 aa10.85□□□□□ -0.67
LINC01397-201ENST00000554808 EMILIN1Q9Y6C2 1016 aa10.85□□□□□ -0.67
LINC01397-201ENST00000554808 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 DLG5Q8TDM6 1919 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 PPP2R1AP30153 589 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 MTHFSP49914 203 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 EVA1CP58658 441 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 CHRNA2Q15822 529 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 TRPC5Q9UL62 973 aaPredicted RBP10.84□□□□□ -0.67
LINC01397-201ENST00000554808 COL3A1P02461 1466 aaPredicted RBP10.84□□□□□ -0.67
LINC01397-201ENST00000554808 THSD7AQ9UPZ6 1657 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 KAT6BQ8WYB5 2073 aa10.84□□□□□ -0.67
LINC01397-201ENST00000554808 PPM1GO15355 546 aaPredicted RBP10.83□□□□□ -0.68
LINC01397-201ENST00000554808 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
LINC01397-201ENST00000554808 THRAP3Q9Y2W1 955 aaKnown RBP10.83□□□□□ -0.68
LINC01397-201ENST00000554808 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
LINC01397-201ENST00000554808 NCAPD2Q15021 1401 aa10.83□□□□□ -0.68
LINC01397-201ENST00000554808 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
LINC01397-201ENST00000554808 VPS72Q15906 364 aa10.82□□□□□ -0.68
LINC01397-201ENST00000554808 ANKRD24Q8TF21 1146 aa10.82□□□□□ -0.68
LINC01397-201ENST00000554808 LRRC37A3O60309 1634 aa10.82□□□□□ -0.68
LINC01397-201ENST00000554808 SBF2Q86WG5 1849 aa10.81□□□□□ -0.68
LINC01397-201ENST00000554808 LRP5O75197 1615 aa10.81□□□□□ -0.68
LINC01397-201ENST00000554808 DIAPH1O60610 1272 aaKnown RBP10.81□□□□□ -0.68
LINC01397-201ENST00000554808 CSB-PGBD3P0DP91 1061 aa10.81□□□□□ -0.68
LINC01397-201ENST00000554808 CARD10Q9BWT7 1032 aa10.81□□□□□ -0.68
LINC01397-201ENST00000554808 NUDCQ9Y266 331 aa10.81□□□□□ -0.68
LINC01397-201ENST00000554808 AXIN2Q9Y2T1 843 aa10.81□□□□□ -0.68
LINC01397-201ENST00000554808 FBLN1P23142 703 aa10.8□□□□□ -0.68
LINC01397-201ENST00000554808 HSP90AB2PQ58FF8 381 aa10.8□□□□□ -0.68
LINC01397-201ENST00000554808 TOM1L2Q6ZVM7 507 aa10.8□□□□□ -0.68
LINC01397-201ENST00000554808 CDCA7Q9BWT1 371 aaPredicted RBP10.8□□□□□ -0.68
LINC01397-201ENST00000554808 STRN4Q9NRL3 753 aa10.8□□□□□ -0.68
LINC01397-201ENST00000554808 SPATA31A5Q5VU36 1347 aa10.8□□□□□ -0.68
LINC01397-201ENST00000554808 SPATA31A7Q8IWB4 1347 aa10.8□□□□□ -0.68
LINC01397-201ENST00000554808 SCN11AQ9UI33 1791 aa10.8□□□□□ -0.68
LINC01397-201ENST00000554808 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
LINC01397-201ENST00000554808 SPATA31A1Q5TZJ5 1347 aa10.79□□□□□ -0.68
LINC01397-201ENST00000554808 IGSF1Q8N6C5 1336 aa10.79□□□□□ -0.68
LINC01397-201ENST00000554808 KDRP35968 1356 aa10.78□□□□□ -0.68
LINC01397-201ENST00000554808 EIF4A2Q14240 407 aaKnown RBP10.78□□□□□ -0.68
LINC01397-201ENST00000554808 TCP11L2Q8N4U5 519 aa10.78□□□□□ -0.68
LINC01397-201ENST00000554808 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
LINC01397-201ENST00000554808 PNNQ9H307 717 aaKnown RBP10.78□□□□□ -0.68
LINC01397-201ENST00000554808 NLRP2Q9NX02 1062 aa10.78□□□□□ -0.68
LINC01397-201ENST00000554808 CCDC9Q9Y3X0 531 aaKnown RBP10.78□□□□□ -0.68
LINC01397-201ENST00000554808 ITGB4P16144 1822 aa10.77□□□□□ -0.68
LINC01397-201ENST00000554808 IL13P35225 146 aa10.77□□□□□ -0.69
LINC01397-201ENST00000554808 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
LINC01397-201ENST00000554808 DISP2A7MBM2 1401 aa10.76□□□□□ -0.69
LINC01397-201ENST00000554808 TNS2Q63HR2 1409 aa10.76□□□□□ -0.69
LINC01397-201ENST00000554808 CCER2I3L3R5 266 aa10.76□□□□□ -0.69
LINC01397-201ENST00000554808 LTV1Q96GA3 475 aaPredicted RBP10.76□□□□□ -0.69
LINC01397-201ENST00000554808 TNS1Q9HBL0 1735 aaKnown RBP10.75□□□□□ -0.69
LINC01397-201ENST00000554808 NEFMP07197 916 aa10.75□□□□□ -0.69
LINC01397-201ENST00000554808 IL2RBP14784 551 aa10.75□□□□□ -0.69
LINC01397-201ENST00000554808 NBPF6Q5VWK0 638 aa10.75□□□□□ -0.69
LINC01397-201ENST00000554808 RAPGEF4Q8WZA2 1011 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms