RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 RGPD3A6NKT7 1758 aaPredicted RBP20.88■□□□□ 0.93
CFAP54-206ENST00000554621 RGPD4Q7Z3J3 1758 aa20.88■□□□□ 0.93
CFAP54-206ENST00000554621 SOX12O15370 315 aa20.86■□□□□ 0.93
CFAP54-206ENST00000554621 CARD10Q9BWT7 1032 aa20.86■□□□□ 0.93
CFAP54-206ENST00000554621 SLIT3O75094 1523 aa20.86■□□□□ 0.93
CFAP54-206ENST00000554621 ZBTB7AO95365 584 aa20.85■□□□□ 0.93
CFAP54-206ENST00000554621 MARCH10Q8NA82 808 aaPredicted RBP20.85■□□□□ 0.93
CFAP54-206ENST00000554621 LRRC37A3O60309 1634 aa20.85■□□□□ 0.93
CFAP54-206ENST00000554621 TTC21AQ8NDW8 1320 aa20.84■□□□□ 0.93
CFAP54-206ENST00000554621 QRICH2Q9H0J4 1663 aa20.84■□□□□ 0.93
CFAP54-206ENST00000554621 ARHGEF25Q86VW2 580 aa20.84■□□□□ 0.93
CFAP54-206ENST00000554621 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
CFAP54-206ENST00000554621 BCL9O00512 1426 aa20.84■□□□□ 0.93
CFAP54-206ENST00000554621 CPSF1Q10570 1443 aaKnown RBP20.84■□□□□ 0.93
CFAP54-206ENST00000554621 TXNRD1Q16881 649 aa20.83■□□□□ 0.93
CFAP54-206ENST00000554621 AXIN2Q9Y2T1 843 aa20.83■□□□□ 0.93
CFAP54-206ENST00000554621 PEAK1Q9H792 1746 aa20.83■□□□□ 0.92
CFAP54-206ENST00000554621 CCDC7Q96M83 1385 aa20.83■□□□□ 0.92
CFAP54-206ENST00000554621 ATF5Q9Y2D1 282 aaPredicted RBP20.82■□□□□ 0.92
CFAP54-206ENST00000554621 TTC21BQ7Z4L5 1316 aa20.81■□□□□ 0.92
CFAP54-206ENST00000554621 SLC15A2Q16348 729 aa20.81■□□□□ 0.92
CFAP54-206ENST00000554621 SBF2Q86WG5 1849 aa20.81■□□□□ 0.92
CFAP54-206ENST00000554621 AKAP12Q02952 1782 aa20.8■□□□□ 0.92
CFAP54-206ENST00000554621 MTFR1LQ9H019 292 aa20.79■□□□□ 0.92
CFAP54-206ENST00000554621 PTF1AQ7RTS3 328 aa20.78■□□□□ 0.92
CFAP54-206ENST00000554621 PROM2Q8N271 834 aa20.78■□□□□ 0.92
CFAP54-206ENST00000554621 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
CFAP54-206ENST00000554621 PIK3C2AO00443 1686 aa20.77■□□□□ 0.91
CFAP54-206ENST00000554621 ROCK2O75116 1388 aaKnown RBP20.76■□□□□ 0.91
CFAP54-206ENST00000554621 TRPM1Q7Z4N2 1603 aa20.76■□□□□ 0.91
CFAP54-206ENST00000554621 COL18A1P39060 1754 aa20.75■□□□□ 0.91
CFAP54-206ENST00000554621 CASZ1Q86V15 1759 aa20.75■□□□□ 0.91
CFAP54-206ENST00000554621 PTGER2P43116 358 aa20.75■□□□□ 0.91
CFAP54-206ENST00000554621 L3MBTL2Q969R5 705 aa20.75■□□□□ 0.91
CFAP54-206ENST00000554621 SYT17Q9BSW7 474 aa20.75■□□□□ 0.91
CFAP54-206ENST00000554621 FHDC1Q9C0D6 1143 aaPredicted RBP20.75■□□□□ 0.91
CFAP54-206ENST00000554621 NLRP2Q9NX02 1062 aa20.75■□□□□ 0.91
CFAP54-206ENST00000554621 WNK3Q9BYP7 1800 aa20.74■□□□□ 0.91
CFAP54-206ENST00000554621 PDGFDQ9GZP0 370 aaPredicted RBP20.74■□□□□ 0.91
CFAP54-206ENST00000554621 TNS2Q63HR2 1409 aa20.72■□□□□ 0.91
CFAP54-206ENST00000554621 IL2RBP14784 551 aa20.72■□□□□ 0.91
CFAP54-206ENST00000554621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.72■□□□□ 0.91
CFAP54-206ENST00000554621 ZNF784Q8NCA9 323 aaPredicted RBP20.72■□□□□ 0.91
CFAP54-206ENST00000554621 ACSBG1Q96GR2 724 aa20.72■□□□□ 0.91
CFAP54-206ENST00000554621 ARXQ96QS3 562 aa20.72■□□□□ 0.91
CFAP54-206ENST00000554621 ABCC6O95255 1503 aa20.72■□□□□ 0.91
CFAP54-206ENST00000554621 HDGFL2Q7Z4V5 671 aaPredicted RBP20.7■□□□□ 0.9
CFAP54-206ENST00000554621 MYOM1P52179 1685 aa20.7■□□□□ 0.9
CFAP54-206ENST00000554621 RGPD5Q99666 1765 aa20.68■□□□□ 0.9
CFAP54-206ENST00000554621 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
CFAP54-206ENST00000554621 ERBB3P21860 1342 aa20.68■□□□□ 0.9
CFAP54-206ENST00000554621 POLD1P28340 1107 aa20.67■□□□□ 0.9
CFAP54-206ENST00000554621 NEUROD1Q13562 356 aa20.67■□□□□ 0.9
CFAP54-206ENST00000554621 GPR162Q16538 588 aa20.67■□□□□ 0.9
CFAP54-206ENST00000554621 ANKRD24Q8TF21 1146 aa20.66■□□□□ 0.9
CFAP54-206ENST00000554621 NFAT5O94916 1531 aa20.66■□□□□ 0.9
CFAP54-206ENST00000554621 SLC16A10Q8TF71 515 aa20.65■□□□□ 0.9
CFAP54-206ENST00000554621 TERF2IPQ9NYB0 399 aa20.65■□□□□ 0.9
CFAP54-206ENST00000554621 NHSQ6T4R5 1651 aa20.64■□□□□ 0.9
CFAP54-206ENST00000554621 USP31Q70CQ4 1352 aa20.64■□□□□ 0.89
CFAP54-206ENST00000554621 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.89
CFAP54-206ENST00000554621 KLHL34Q8N239 644 aa20.64■□□□□ 0.89
CFAP54-206ENST00000554621 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
CFAP54-206ENST00000554621 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
CFAP54-206ENST00000554621 MAP3K5Q99683 1374 aa20.61■□□□□ 0.89
CFAP54-206ENST00000554621 NME9Q86XW9 330 aa20.61■□□□□ 0.89
CFAP54-206ENST00000554621 DDX54Q8TDD1 881 aaKnown RBP20.61■□□□□ 0.89
CFAP54-206ENST00000554621 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
CFAP54-206ENST00000554621 SYTL4Q96C24 671 aaPredicted RBP20.6■□□□□ 0.89
CFAP54-206ENST00000554621 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
CFAP54-206ENST00000554621 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
CFAP54-206ENST00000554621 TFCP2L1Q9NZI6 479 aa20.6■□□□□ 0.89
CFAP54-206ENST00000554621 HMGB2P26583 209 aaKnown RBP20.59■□□□□ 0.89
CFAP54-206ENST00000554621 C1QTNF8P60827 252 aa20.59■□□□□ 0.89
CFAP54-206ENST00000554621 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
CFAP54-206ENST00000554621 CHD4Q14839 1912 aa20.58■□□□□ 0.88
CFAP54-206ENST00000554621 MON2Q7Z3U7 1717 aa20.58■□□□□ 0.88
CFAP54-206ENST00000554621 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
CFAP54-206ENST00000554621 EDC4Q6P2E9 1401 aaKnown RBP20.57■□□□□ 0.88
CFAP54-206ENST00000554621 ZNF827Q17R98 1081 aa20.56■□□□□ 0.88
CFAP54-206ENST00000554621 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
CFAP54-206ENST00000554621 BTAF1O14981 1849 aa20.55■□□□□ 0.88
CFAP54-206ENST00000554621 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
CFAP54-206ENST00000554621 IP6K1Q92551 441 aa20.55■□□□□ 0.88
CFAP54-206ENST00000554621 LRRC4BQ9NT99 713 aa20.55■□□□□ 0.88
CFAP54-206ENST00000554621 LTN1O94822 1766 aa20.54■□□□□ 0.88
CFAP54-206ENST00000554621 MSH5O43196 834 aa20.54■□□□□ 0.88
CFAP54-206ENST00000554621 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
CFAP54-206ENST00000554621 AKT1S1Q96B36 256 aa20.54■□□□□ 0.88
CFAP54-206ENST00000554621 SLC12A5Q9H2X9 1139 aa20.54■□□□□ 0.88
CFAP54-206ENST00000554621 AMPHP49418 695 aa20.53■□□□□ 0.88
CFAP54-206ENST00000554621 COG3Q96JB2 828 aa20.53■□□□□ 0.88
CFAP54-206ENST00000554621 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
CFAP54-206ENST00000554621 GRIN3BO60391 1043 aa20.52■□□□□ 0.88
CFAP54-206ENST00000554621 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
CFAP54-206ENST00000554621 PAPPAQ13219 1627 aa20.52■□□□□ 0.88
CFAP54-206ENST00000554621 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
CFAP54-206ENST00000554621 ZCRB1Q8TBF4 217 aaKnown RBP20.5■□□□□ 0.87
CFAP54-206ENST00000554621 ANKRD36BQ8N2N9 1353 aa20.49■□□□□ 0.87
CFAP54-206ENST00000554621 CCNL1Q9UK58 526 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms