RNA–Protein interactions for RNA: ENST00000554590.5

FCF1-206, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-206ENST00000554590 PROX2Q3B8N5 592 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 RSPH6AQ9H0K4 717 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 GOPCQ9HD26 462 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 RRP7BPQ9NSQ0 103 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 HCSTQ9UBK5 93 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 ZNF777Q9ULD5 760 aaPredicted RBP6.62□□□□□ -1.35
FCF1-206ENST00000554590 ABCC3O15438 1527 aa6.61□□□□□ -1.35
FCF1-206ENST00000554590 TRPM2O94759 1503 aa6.61□□□□□ -1.35
FCF1-206ENST00000554590 RPGRIP1LQ68CZ1 1315 aa6.61□□□□□ -1.35
FCF1-206ENST00000554590 C3orf80F5H4A9 247 aa6.61□□□□□ -1.35
FCF1-206ENST00000554590 RAPGEF3O95398 923 aa6.61□□□□□ -1.35
FCF1-206ENST00000554590 PCMTD1Q96MG8 357 aaPredicted RBP6.61□□□□□ -1.35
FCF1-206ENST00000554590 KIAA1468Q9P260 1216 aa6.61□□□□□ -1.35
FCF1-206ENST00000554590 ABCA6Q8N139 1617 aa6.61□□□□□ -1.35
FCF1-206ENST00000554590 SPATA31E1Q6ZUB1 1445 aa6.6□□□□□ -1.35
FCF1-206ENST00000554590 PRAG1Q86YV5 1406 aa6.6□□□□□ -1.35
FCF1-206ENST00000554590 SMAPO00193 183 aa6.6□□□□□ -1.35
FCF1-206ENST00000554590 DNAJB2P25686 324 aa6.6□□□□□ -1.35
FCF1-206ENST00000554590 PPARGC1BQ86YN6 1023 aaKnown RBP6.6□□□□□ -1.35
FCF1-206ENST00000554590 ZBED2Q9BTP6 218 aa6.6□□□□□ -1.35
FCF1-206ENST00000554590 TET3O43151 1660 aa6.6□□□□□ -1.35
FCF1-206ENST00000554590 KDM5AP29375 1690 aaKnown RBP6.59□□□□□ -1.35
FCF1-206ENST00000554590 AXIN2Q9Y2T1 843 aa6.59□□□□□ -1.35
FCF1-206ENST00000554590 NRXN1Q9ULB1 1477 aa6.59□□□□□ -1.36
FCF1-206ENST00000554590 GPRASP1Q5JY77 1395 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 SPATA31D1Q6ZQQ2 1576 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 PBX2P40425 430 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 SKIV2LQ15477 1246 aaKnown RBP6.58□□□□□ -1.36
FCF1-206ENST00000554590 SH3D19Q5HYK7 790 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 POTEEQ6S8J3 1075 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 SULF1Q8IWU6 871 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 ZNF687Q8N1G0 1237 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 SLC4A5Q9BY07 1137 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 TMEM134Q9H6X4 195 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 RABGEF1Q9UJ41 708 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 NLRP1Q9C000 1473 aa6.58□□□□□ -1.36
FCF1-206ENST00000554590 DDX11L8A8MPP1 907 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 KIF3BO15066 747 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 DIXDC1Q155Q3 683 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 DMRTA1Q5VZB9 504 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 ANKRD13DQ6ZTN6 518 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 POLR3EQ9NVU0 708 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 CHIC2Q9UKJ5 165 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 MROH2AA6NES4 1674 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 CCDC144AA2RUR9 1427 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 KDM6BO15054 1643 aa6.57□□□□□ -1.36
FCF1-206ENST00000554590 MYOM2P54296 1465 aa6.56□□□□□ -1.36
FCF1-206ENST00000554590 HDGFP51858 240 aaKnown RBP6.56□□□□□ -1.36
FCF1-206ENST00000554590 ARID4BQ4LE39 1312 aaPredicted RBP6.55□□□□□ -1.36
FCF1-206ENST00000554590 PIK3C2BO00750 1634 aa6.55□□□□□ -1.36
FCF1-206ENST00000554590 PPP1R15AO75807 674 aaPredicted RBP6.55□□□□□ -1.36
FCF1-206ENST00000554590 CD46P15529 392 aa6.55□□□□□ -1.36
FCF1-206ENST00000554590 NUTM1Q86Y26 1132 aa6.55□□□□□ -1.36
FCF1-206ENST00000554590 CCER1Q8TC90 406 aaPredicted RBP6.55□□□□□ -1.36
FCF1-206ENST00000554590 TBC1D2Q9BYX2 928 aa6.55□□□□□ -1.36
FCF1-206ENST00000554590 VPS9D1Q9Y2B5 631 aa6.55□□□□□ -1.36
FCF1-206ENST00000554590 ERVK-7P63135 1459 aa6.54□□□□□ -1.36
FCF1-206ENST00000554590 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
FCF1-206ENST00000554590 MYSM1Q5VVJ2 828 aa6.54□□□□□ -1.36
FCF1-206ENST00000554590 RDH13Q8NBN7 331 aa6.54□□□□□ -1.36
FCF1-206ENST00000554590 PROCA1Q8NCQ7 364 aaPredicted RBP6.54□□□□□ -1.36
FCF1-206ENST00000554590 SEPT9Q9UHD8 586 aaPredicted RBP6.54□□□□□ -1.36
FCF1-206ENST00000554590 ZMYM3Q14202 1370 aa6.54□□□□□ -1.36
FCF1-206ENST00000554590 SBNO2Q9Y2G9 1366 aa6.54□□□□□ -1.36
FCF1-206ENST00000554590 SWT1Q5T5J6 900 aaKnown RBP6.53□□□□□ -1.36
FCF1-206ENST00000554590 SPIRE2Q8WWL2 714 aa6.53□□□□□ -1.36
FCF1-206ENST00000554590 ADGRB3O60242 1522 aa6.53□□□□□ -1.36
FCF1-206ENST00000554590 UGGT1Q9NYU2 1555 aa6.52□□□□□ -1.36
FCF1-206ENST00000554590 ITGAEP38570 1179 aa6.52□□□□□ -1.37
FCF1-206ENST00000554590 SLC4A3P48751 1232 aa6.52□□□□□ -1.37
FCF1-206ENST00000554590 CLK2P49760 499 aaKnown RBP6.52□□□□□ -1.37
FCF1-206ENST00000554590 FAM98CQ17RN3 349 aaKnown RBP6.52□□□□□ -1.37
FCF1-206ENST00000554590 SIRT1Q96EB6 747 aa6.52□□□□□ -1.37
FCF1-206ENST00000554590 PUS7Q96PZ0 661 aaKnown RBP6.52□□□□□ -1.37
FCF1-206ENST00000554590 ARHGAP23Q9P227 1491 aa6.52□□□□□ -1.37
FCF1-206ENST00000554590 MADDQ8WXG6 1647 aa6.51□□□□□ -1.37
FCF1-206ENST00000554590 TK2O00142 265 aa6.51□□□□□ -1.37
FCF1-206ENST00000554590 FLIIQ13045 1269 aa6.51□□□□□ -1.37
FCF1-206ENST00000554590 RIC3Q7Z5B4 369 aa6.51□□□□□ -1.37
FCF1-206ENST00000554590 LAPTM4BQ86VI4 370 aa6.51□□□□□ -1.37
FCF1-206ENST00000554590 NBPF3Q9H094 633 aa6.51□□□□□ -1.37
FCF1-206ENST00000554590 SLIT1O75093 1534 aa6.5□□□□□ -1.37
FCF1-206ENST00000554590 ADAMTSL3P82987 1691 aa6.5□□□□□ -1.37
FCF1-206ENST00000554590 RALGAPBQ86X10 1494 aa6.5□□□□□ -1.37
FCF1-206ENST00000554590 PIK3R4Q99570 1358 aa6.5□□□□□ -1.37
FCF1-206ENST00000554590 TRIM52Q96A61 297 aa6.5□□□□□ -1.37
FCF1-206ENST00000554590 LAMC1P11047 1609 aa6.5□□□□□ -1.37
FCF1-206ENST00000554590 CAMSAP1Q5T5Y3 1602 aa6.5□□□□□ -1.37
FCF1-206ENST00000554590 E9PCH4 1651 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 TONSLQ96HA7 1378 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 BHMG1C9JSJ3 638 aaPredicted RBP6.49□□□□□ -1.37
FCF1-206ENST00000554590 KDM4AO75164 1064 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 GCGRP47871 477 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 SAMD7Q7Z3H4 446 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.49□□□□□ -1.37
FCF1-206ENST00000554590 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.49□□□□□ -1.37
FCF1-206ENST00000554590 ZMYND15Q9H091 742 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 LIMD1Q9UGP4 676 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 PIK3C2GO75747 1445 aa6.49□□□□□ -1.37
FCF1-206ENST00000554590 SETBP1Q9Y6X0 1596 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms