RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 GPSM3Q9Y4H4 160 aa5.29□□□□□ -1.56
IFT43-208ENST00000554423 SOCS7O14512 581 aa5.28□□□□□ -1.56
IFT43-208ENST00000554423 FOXK2Q01167 660 aa5.28□□□□□ -1.56
IFT43-208ENST00000554423 LRRN4Q8WUT4 740 aa5.28□□□□□ -1.56
IFT43-208ENST00000554423 ZNF592Q92610 1267 aa5.28□□□□□ -1.56
IFT43-208ENST00000554423 CDV3Q9UKY7 258 aaKnown RBP5.28□□□□□ -1.56
IFT43-208ENST00000554423 ADAMTS8Q9UP79 889 aa5.28□□□□□ -1.56
IFT43-208ENST00000554423 SIAH2O43255 324 aa5.27□□□□□ -1.57
IFT43-208ENST00000554423 ADAM23O75077 832 aa5.27□□□□□ -1.57
IFT43-208ENST00000554423 BMP1P13497 986 aa5.27□□□□□ -1.57
IFT43-208ENST00000554423 ARID5BQ14865 1188 aa5.27□□□□□ -1.57
IFT43-208ENST00000554423 NR6A1Q15406 480 aa5.27□□□□□ -1.57
IFT43-208ENST00000554423 ZBTB33Q86T24 672 aa5.27□□□□□ -1.57
IFT43-208ENST00000554423 ARHGAP9Q9BRR9 750 aa5.27□□□□□ -1.57
IFT43-208ENST00000554423 MAGEB6P1A0A0J9YX57 407 aa5.26□□□□□ -1.57
IFT43-208ENST00000554423 NR5A1Q13285 461 aa5.26□□□□□ -1.57
IFT43-208ENST00000554423 FOXJ1Q92949 421 aa5.26□□□□□ -1.57
IFT43-208ENST00000554423 ZNF330Q9Y3S2 320 aaPredicted RBP5.26□□□□□ -1.57
IFT43-208ENST00000554423 IRS1P35568 1242 aa5.25□□□□□ -1.57
IFT43-208ENST00000554423 MCCD1P59942 119 aaPredicted RBP5.25□□□□□ -1.57
IFT43-208ENST00000554423 SH3BP5LQ7L8J4 393 aa5.25□□□□□ -1.57
IFT43-208ENST00000554423 CDK15Q96Q40 435 aa5.25□□□□□ -1.57
IFT43-208ENST00000554423 ADH1CP00326 375 aa5.24□□□□□ -1.57
IFT43-208ENST00000554423 VSIG8P0DPA2 414 aa5.24□□□□□ -1.57
IFT43-208ENST00000554423 TMEM132AQ24JP5 1023 aa5.24□□□□□ -1.57
IFT43-208ENST00000554423 VASH1Q7L8A9 365 aaPredicted RBP5.24□□□□□ -1.57
IFT43-208ENST00000554423 TRIM46Q7Z4K8 759 aa5.24□□□□□ -1.57
IFT43-208ENST00000554423 TRMT44Q8IYL2 757 aaKnown RBP5.24□□□□□ -1.57
IFT43-208ENST00000554423 SLC10A4Q96EP9 437 aa5.24□□□□□ -1.57
IFT43-208ENST00000554423 MAP4K5Q9Y4K4 846 aa5.24□□□□□ -1.57
IFT43-208ENST00000554423 DHX9Q08211 1270 aaKnown RBP5.23□□□□□ -1.57
IFT43-208ENST00000554423 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
IFT43-208ENST00000554423 FBXO31Q5XUX0 539 aaPredicted RBP5.23□□□□□ -1.57
IFT43-208ENST00000554423 SH3RF1Q7Z6J0 888 aa5.23□□□□□ -1.57
IFT43-208ENST00000554423 CCDC125Q86Z20 511 aa5.23□□□□□ -1.57
IFT43-208ENST00000554423 C1QTNF2Q9BXJ5 285 aa5.23□□□□□ -1.57
IFT43-208ENST00000554423 CARD14Q9BXL6 1004 aa5.23□□□□□ -1.57
IFT43-208ENST00000554423 NDUFB9Q9Y6M9 179 aa5.23□□□□□ -1.57
IFT43-208ENST00000554423 CAPN5O15484 640 aaPredicted RBP5.22□□□□□ -1.57
IFT43-208ENST00000554423 NBPF20Q3BBV1 942 aa5.22□□□□□ -1.57
IFT43-208ENST00000554423 DZIP3Q86Y13 1208 aaKnown RBP5.22□□□□□ -1.57
IFT43-208ENST00000554423 WWC1Q8IX03 1113 aa5.22□□□□□ -1.57
IFT43-208ENST00000554423 ZBBXA8MT70 800 aa5.21□□□□□ -1.58
IFT43-208ENST00000554423 UPP2O95045 317 aa5.21□□□□□ -1.58
IFT43-208ENST00000554423 NNTQ13423 1086 aa5.21□□□□□ -1.58
IFT43-208ENST00000554423 Q8N3U1 123 aa5.21□□□□□ -1.58
IFT43-208ENST00000554423 ADAM32Q8TC27 787 aa5.21□□□□□ -1.58
IFT43-208ENST00000554423 HMX1Q9NP08 348 aaPredicted RBP5.21□□□□□ -1.58
IFT43-208ENST00000554423 EMILIN1Q9Y6C2 1016 aa5.21□□□□□ -1.58
IFT43-208ENST00000554423 TLL2Q9Y6L7 1015 aa5.21□□□□□ -1.58
IFT43-208ENST00000554423 GRM5P41594 1212 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 WDR4P57081 412 aaKnown RBP5.2□□□□□ -1.58
IFT43-208ENST00000554423 FLIIQ13045 1269 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 SCARF1Q14162 830 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 ERFEQ4G0M1 354 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 C4orf48Q5BLP8 95 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 KANK3Q6NY19 840 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 ZFP42Q96MM3 310 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 TRIM34Q9BYJ4 488 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 PGPEP1Q9NXJ5 209 aa5.2□□□□□ -1.58
IFT43-208ENST00000554423 BTBD11A6QL63 1104 aa5.19□□□□□ -1.58
IFT43-208ENST00000554423 MSTNO14793 375 aa5.19□□□□□ -1.58
IFT43-208ENST00000554423 RNF20Q5VTR2 975 aa5.19□□□□□ -1.58
IFT43-208ENST00000554423 EPS8L1Q8TE68 723 aa5.19□□□□□ -1.58
IFT43-208ENST00000554423 GJD4Q96KN9 370 aaPredicted RBP5.19□□□□□ -1.58
IFT43-208ENST00000554423 KCTD15Q96SI1 283 aaPredicted RBP5.19□□□□□ -1.58
IFT43-208ENST00000554423 SNRKQ9NRH2 765 aa5.19□□□□□ -1.58
IFT43-208ENST00000554423 RAD21O60216 631 aa5.18□□□□□ -1.58
IFT43-208ENST00000554423 MARSP56192 900 aaKnown RBP5.18□□□□□ -1.58
IFT43-208ENST00000554423 NR1H3Q13133 447 aa5.18□□□□□ -1.58
IFT43-208ENST00000554423 SEPT12Q8IYM1 358 aa5.18□□□□□ -1.58
IFT43-208ENST00000554423 CCDC116Q8IYX3 515 aa5.18□□□□□ -1.58
IFT43-208ENST00000554423 MTMR14Q8NCE2 650 aa5.18□□□□□ -1.58
IFT43-208ENST00000554423 ESF1Q9H501 851 aaKnown RBP5.18□□□□□ -1.58
IFT43-208ENST00000554423 ZIC2O95409 532 aaPredicted RBP5.17□□□□□ -1.58
IFT43-208ENST00000554423 FSHRP23945 695 aa5.17□□□□□ -1.58
IFT43-208ENST00000554423 EIF4G2P78344 907 aaKnown RBP eCLIP5.17□□□□□ -1.58
IFT43-208ENST00000554423 WASHC4Q2M389 1173 aa5.17□□□□□ -1.58
IFT43-208ENST00000554423 SVOPQ8N4V2 548 aa5.17□□□□□ -1.58
IFT43-208ENST00000554423 PCDHB9Q9Y5E1 797 aa5.17□□□□□ -1.58
IFT43-208ENST00000554423 TSEN34Q9BSV6 310 aaKnown RBP5.16□□□□□ -1.58
IFT43-208ENST00000554423 SOBPA7XYQ1 873 aa5.15□□□□□ -1.59
IFT43-208ENST00000554423 FBXO45P0C2W1 286 aa5.15□□□□□ -1.59
IFT43-208ENST00000554423 TIMP2P16035 220 aa5.15□□□□□ -1.59
IFT43-208ENST00000554423 CNTNAP3BQ96NU0 1288 aa5.15□□□□□ -1.59
IFT43-208ENST00000554423 CNTNAP3Q9BZ76 1288 aa5.15□□□□□ -1.59
IFT43-208ENST00000554423 PPP1R26Q5T8A7 1209 aaPredicted RBP5.14□□□□□ -1.59
IFT43-208ENST00000554423 MRPL14Q6P1L8 145 aaKnown RBP5.14□□□□□ -1.59
IFT43-208ENST00000554423 GALNT6Q8NCL4 622 aa5.14□□□□□ -1.59
IFT43-208ENST00000554423 ITPKCQ96DU7 683 aa5.14□□□□□ -1.59
IFT43-208ENST00000554423 SCARF2Q96GP6 870 aaPredicted RBP5.14□□□□□ -1.59
IFT43-208ENST00000554423 SPOCK3Q9BQ16 436 aa5.14□□□□□ -1.59
IFT43-208ENST00000554423 KLF16Q9BXK1 252 aaPredicted RBP5.14□□□□□ -1.59
IFT43-208ENST00000554423 ESPNB1AK53 854 aa5.13□□□□□ -1.59
IFT43-208ENST00000554423 K7ELQ4 463 aaPredicted RBP5.13□□□□□ -1.59
IFT43-208ENST00000554423 NR3C2P08235 984 aa5.13□□□□□ -1.59
IFT43-208ENST00000554423 BMP2P12643 396 aa5.13□□□□□ -1.59
IFT43-208ENST00000554423 SOX11P35716 441 aa5.13□□□□□ -1.59
IFT43-208ENST00000554423 ABL2P42684 1182 aa5.13□□□□□ -1.59
IFT43-208ENST00000554423 MCM6Q14566 821 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms