RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ERFEQ4G0M1 354 aa8.75□□□□□ -1.01
MTHFD1-206ENST00000554353 SLC10A4Q96EP9 437 aa8.75□□□□□ -1.01
MTHFD1-206ENST00000554353 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.74□□□□□ -1.01
MTHFD1-206ENST00000554353 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
MTHFD1-206ENST00000554353 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
MTHFD1-206ENST00000554353 MAFBQ9Y5Q3 323 aaPredicted RBP8.74□□□□□ -1.01
MTHFD1-206ENST00000554353 PPP1R15AO75807 674 aaPredicted RBP8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 CD2BP2O95400 341 aaKnown RBP8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 RPIAP49247 311 aa8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 SKOR1P84550 965 aa8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 CDCA8Q53HL2 280 aa8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 RNF135Q8IUD6 432 aa8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 FAM174AQ8TBP5 190 aa8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 ACIN1Q9UKV3 1341 aaKnown RBP8.73□□□□□ -1.01
MTHFD1-206ENST00000554353 WNT7BP56706 349 aa8.72□□□□□ -1.01
MTHFD1-206ENST00000554353 GFRA3O60609 400 aa8.71□□□□□ -1.02
MTHFD1-206ENST00000554353 RANGAP1P46060 587 aaPredicted RBP8.71□□□□□ -1.02
MTHFD1-206ENST00000554353 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
MTHFD1-206ENST00000554353 DEPDC4Q8N2C3 294 aa8.71□□□□□ -1.02
MTHFD1-206ENST00000554353 NFATC2IPQ8NCF5 419 aa8.71□□□□□ -1.02
MTHFD1-206ENST00000554353 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
MTHFD1-206ENST00000554353 USP17L5A8MUK1 530 aa8.7□□□□□ -1.02
MTHFD1-206ENST00000554353 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
MTHFD1-206ENST00000554353 C1QTNF2Q9BXJ5 285 aa8.7□□□□□ -1.02
MTHFD1-206ENST00000554353 PRKD2Q9BZL6 878 aa8.7□□□□□ -1.02
MTHFD1-206ENST00000554353 USP17L3A6NCW0 530 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 USP17L4A6NCW7 530 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 SLC19A1P41440 591 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 RAB15P59190 212 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 USP17L2Q6R6M4 530 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 USP17L1Q7RTZ2 530 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 PHTF2Q8N3S3 785 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 PLPP7Q8NBV4 271 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
MTHFD1-206ENST00000554353 PDIA4P13667 645 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-206ENST00000554353 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
MTHFD1-206ENST00000554353 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
MTHFD1-206ENST00000554353 RC3H1Q5TC82 1133 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-206ENST00000554353 TRMT44Q8IYL2 757 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-206ENST00000554353 RETREG2Q8NC44 543 aa8.68□□□□□ -1.02
MTHFD1-206ENST00000554353 SRPK2P78362 688 aaKnown RBP8.67□□□□□ -1.02
MTHFD1-206ENST00000554353 NCOA4Q13772 614 aa8.67□□□□□ -1.02
MTHFD1-206ENST00000554353 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
MTHFD1-206ENST00000554353 VRTNQ9H8Y1 702 aa8.67□□□□□ -1.02
MTHFD1-206ENST00000554353 CDV3Q9UKY7 258 aaKnown RBP8.67□□□□□ -1.02
MTHFD1-206ENST00000554353 RNF20Q5VTR2 975 aa8.66□□□□□ -1.02
MTHFD1-206ENST00000554353 VASH1Q7L8A9 365 aaPredicted RBP8.66□□□□□ -1.02
MTHFD1-206ENST00000554353 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
MTHFD1-206ENST00000554353 KCTD15Q96SI1 283 aaPredicted RBP8.66□□□□□ -1.02
MTHFD1-206ENST00000554353 DOLKQ9UPQ8 538 aa8.66□□□□□ -1.02
MTHFD1-206ENST00000554353 NCAPD3P42695 1498 aa8.65□□□□□ -1.02
MTHFD1-206ENST00000554353 MAP7D1Q3KQU3 841 aa8.65□□□□□ -1.02
MTHFD1-206ENST00000554353 KANK4Q5T7N3 995 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-206ENST00000554353 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
MTHFD1-206ENST00000554353 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.02
MTHFD1-206ENST00000554353 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-206ENST00000554353 CSB-PGBD3P0DP91 1061 aa8.64□□□□□ -1.03
MTHFD1-206ENST00000554353 EML3Q32P44 896 aa8.64□□□□□ -1.03
MTHFD1-206ENST00000554353 OXLD1Q5BKU9 147 aa8.64□□□□□ -1.03
MTHFD1-206ENST00000554353 PCDHB11Q9Y5F2 797 aa8.64□□□□□ -1.03
MTHFD1-206ENST00000554353 TLL2Q9Y6L7 1015 aa8.64□□□□□ -1.03
MTHFD1-206ENST00000554353 ATAD2BQ9ULI0 1458 aa8.64□□□□□ -1.03
MTHFD1-206ENST00000554353 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
MTHFD1-206ENST00000554353 ESPNB1AK53 854 aa8.63□□□□□ -1.03
MTHFD1-206ENST00000554353 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
MTHFD1-206ENST00000554353 NRG2O14511 850 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-206ENST00000554353 LZTS3O60299 673 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-206ENST00000554353 SPRYD7Q5W111 196 aa8.62□□□□□ -1.03
MTHFD1-206ENST00000554353 MRGPRX2Q96LB1 330 aa8.62□□□□□ -1.03
MTHFD1-206ENST00000554353 CDCA7Q9BWT1 371 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-206ENST00000554353 NOD1Q9Y239 953 aa8.62□□□□□ -1.03
MTHFD1-206ENST00000554353 MAP4K5Q9Y4K4 846 aa8.62□□□□□ -1.03
MTHFD1-206ENST00000554353 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 WNT7AO00755 349 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 ATG7O95352 703 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 RASA1P20936 1047 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 FSHRP23945 695 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 FOXC1Q12948 553 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 INTS6LQ5JSJ4 861 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 ZNF697Q5TEC3 545 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 LARP1Q6PKG0 1096 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 SEPT12Q8IYM1 358 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 SMARCA2P51531 1590 aa8.61□□□□□ -1.03
MTHFD1-206ENST00000554353 ERCC6Q03468 1493 aa8.6□□□□□ -1.03
MTHFD1-206ENST00000554353 TRIM67Q6ZTA4 783 aa8.6□□□□□ -1.03
MTHFD1-206ENST00000554353 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
MTHFD1-206ENST00000554353 CARNS1A5YM72 827 aa8.59□□□□□ -1.03
MTHFD1-206ENST00000554353 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
MTHFD1-206ENST00000554353 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
MTHFD1-206ENST00000554353 HMGXB3Q12766 1538 aa8.59□□□□□ -1.03
MTHFD1-206ENST00000554353 USP17L15C9J2P7 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L10C9JJH3 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L13C9JLJ4 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L12C9JPN9 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L11C9JVI0 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L21D6R901 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L18D6R9N7 530 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms