RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 CD163L1Q9NR16 1453 aa31.1■■■□□ 2.57
RCCD1-202ENST00000554302 PARD3Q8TEW0 1356 aa31.1■■■□□ 2.57
RCCD1-202ENST00000554302 NFAT5O94916 1531 aa31.09■■■□□ 2.57
RCCD1-202ENST00000554302 WDR17Q8IZU2 1322 aa31.09■■■□□ 2.57
RCCD1-202ENST00000554302 APBA3O96018 575 aa31.08■■■□□ 2.57
RCCD1-202ENST00000554302 PEAK1Q9H792 1746 aa31.07■■■□□ 2.56
RCCD1-202ENST00000554302 USP54Q70EL1 1684 aa31.06■■■□□ 2.56
RCCD1-202ENST00000554302 USP31Q70CQ4 1352 aa31.06■■■□□ 2.56
RCCD1-202ENST00000554302 LRRC37A3O60309 1634 aa31.06■■■□□ 2.56
RCCD1-202ENST00000554302 TOM1L2Q6ZVM7 507 aa31.06■■■□□ 2.56
RCCD1-202ENST00000554302 C11orf95C9JLR9 678 aaPredicted RBP31.05■■■□□ 2.56
RCCD1-202ENST00000554302 RREB1Q92766 1687 aa31.05■■■□□ 2.56
RCCD1-202ENST00000554302 ABCC6O95255 1503 aa31.03■■■□□ 2.56
RCCD1-202ENST00000554302 WNK3Q9BYP7 1800 aa31.03■■■□□ 2.56
RCCD1-202ENST00000554302 RGPD5Q99666 1765 aa31.03■■■□□ 2.56
RCCD1-202ENST00000554302 PUS7Q96PZ0 661 aaKnown RBP31.03■■■□□ 2.56
RCCD1-202ENST00000554302 OVOS2A0A0G2JMS6 1433 aa31.02■■■□□ 2.56
RCCD1-202ENST00000554302 OVOS2A0A0J9YW53 1432 aa31.02■■■□□ 2.56
RCCD1-202ENST00000554302 OVOS2Q6IE36 1432 aa31.02■■■□□ 2.56
RCCD1-202ENST00000554302 R3HDM1Q15032 1099 aaKnown RBP31.02■■■□□ 2.56
RCCD1-202ENST00000554302 SOX12O15370 315 aa31■■■□□ 2.55
RCCD1-202ENST00000554302 DDB1Q16531 1140 aa31■■■□□ 2.55
RCCD1-202ENST00000554302 NCBP3Q53F19 620 aaKnown RBP31■■■□□ 2.55
RCCD1-202ENST00000554302 CARD10Q9BWT7 1032 aa31■■■□□ 2.55
RCCD1-202ENST00000554302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.99■■■□□ 2.55
RCCD1-202ENST00000554302 CDCA7Q9BWT1 371 aaPredicted RBP30.99■■■□□ 2.55
RCCD1-202ENST00000554302 SLC12A5Q9H2X9 1139 aa30.99■■■□□ 2.55
RCCD1-202ENST00000554302 NUP188Q5SRE5 1749 aa30.98■■■□□ 2.55
RCCD1-202ENST00000554302 TRIM26Q12899 539 aaPredicted RBP30.96■■■□□ 2.55
RCCD1-202ENST00000554302 NME9Q86XW9 330 aa30.96■■■□□ 2.55
RCCD1-202ENST00000554302 TMC1Q8TDI8 760 aa30.96■■■□□ 2.55
RCCD1-202ENST00000554302 TESK2Q96S53 571 aa30.96■■■□□ 2.55
RCCD1-202ENST00000554302 EDC4Q6P2E9 1401 aaKnown RBP30.96■■■□□ 2.55
RCCD1-202ENST00000554302 SBF2Q86WG5 1849 aa30.96■■■□□ 2.55
RCCD1-202ENST00000554302 HDGFL2Q7Z4V5 671 aaPredicted RBP30.95■■■□□ 2.55
RCCD1-202ENST00000554302 BCL9O00512 1426 aa30.95■■■□□ 2.54
RCCD1-202ENST00000554302 A0A1W2PP64 1363 aa30.93■■■□□ 2.54
RCCD1-202ENST00000554302 CSB-PGBD3P0DP91 1061 aa30.92■■■□□ 2.54
RCCD1-202ENST00000554302 MARCH10Q8NA82 808 aaPredicted RBP30.92■■■□□ 2.54
RCCD1-202ENST00000554302 TERF2IPQ9NYB0 399 aa30.92■■■□□ 2.54
RCCD1-202ENST00000554302 RGPD3A6NKT7 1758 aaPredicted RBP30.92■■■□□ 2.54
RCCD1-202ENST00000554302 RGPD4Q7Z3J3 1758 aa30.92■■■□□ 2.54
RCCD1-202ENST00000554302 CCDC7Q96M83 1385 aa30.92■■■□□ 2.54
RCCD1-202ENST00000554302 ST20-MTHFSA0A0A6YYL1 179 aa30.9■■■□□ 2.54
RCCD1-202ENST00000554302 NINLQ9Y2I6 1382 aa30.89■■■□□ 2.54
RCCD1-202ENST00000554302 LTN1O94822 1766 aa30.88■■■□□ 2.53
RCCD1-202ENST00000554302 PLSCR1O15162 318 aa30.88■■■□□ 2.53
RCCD1-202ENST00000554302 BCL11BQ9C0K0 894 aaPredicted RBP30.88■■■□□ 2.53
RCCD1-202ENST00000554302 ERBB3P21860 1342 aa30.88■■■□□ 2.53
RCCD1-202ENST00000554302 SLC24A1O60721 1099 aa30.87■■■□□ 2.53
RCCD1-202ENST00000554302 NBPF14Q5TI25 921 aa30.86■■■□□ 2.53
RCCD1-202ENST00000554302 PTF1AQ7RTS3 328 aa30.85■■■□□ 2.53
RCCD1-202ENST00000554302 TNS2Q63HR2 1409 aa30.83■■■□□ 2.53
RCCD1-202ENST00000554302 EXOC5O00471 708 aa30.83■■■□□ 2.53
RCCD1-202ENST00000554302 ANKRD24Q8TF21 1146 aa30.78■■■□□ 2.52
RCCD1-202ENST00000554302 PROM2Q8N271 834 aa30.77■■■□□ 2.52
RCCD1-202ENST00000554302 NLRP2Q9NX02 1062 aa30.77■■■□□ 2.52
RCCD1-202ENST00000554302 IP6K1Q92551 441 aa30.75■■■□□ 2.51
RCCD1-202ENST00000554302 ANKRD36BQ8N2N9 1353 aa30.75■■■□□ 2.51
RCCD1-202ENST00000554302 IL2RBP14784 551 aa30.74■■■□□ 2.51
RCCD1-202ENST00000554302 USP47Q96K76 1375 aa30.74■■■□□ 2.51
RCCD1-202ENST00000554302 NHSQ6T4R5 1651 aa30.71■■■□□ 2.51
RCCD1-202ENST00000554302 COG3Q96JB2 828 aa30.71■■■□□ 2.51
RCCD1-202ENST00000554302 ANO8Q9HCE9 1232 aaPredicted RBP30.71■■■□□ 2.51
RCCD1-202ENST00000554302 TMF1P82094 1093 aa30.7■■■□□ 2.51
RCCD1-202ENST00000554302 FAM208AQ9UK61 1670 aaKnown RBP30.69■■■□□ 2.5
RCCD1-202ENST00000554302 KCNQ2O43526 872 aa30.68■■■□□ 2.5
RCCD1-202ENST00000554302 MAP3K19Q56UN5 1328 aa30.67■■■□□ 2.5
RCCD1-202ENST00000554302 CASZ1Q86V15 1759 aa30.66■■■□□ 2.5
RCCD1-202ENST00000554302 TXNRD1Q16881 649 aa30.66■■■□□ 2.5
RCCD1-202ENST00000554302 SPON1Q9HCB6 807 aa30.65■■■□□ 2.5
RCCD1-202ENST00000554302 HOXC9P31274 260 aa30.64■■■□□ 2.5
RCCD1-202ENST00000554302 TIMELESSQ9UNS1 1208 aa30.64■■■□□ 2.5
RCCD1-202ENST00000554302 FBLN1P23142 703 aa30.63■■■□□ 2.49
RCCD1-202ENST00000554302 FYB1O15117 783 aa30.62■■■□□ 2.49
RCCD1-202ENST00000554302 ACSBG1Q96GR2 724 aa30.61■■■□□ 2.49
RCCD1-202ENST00000554302 LTV1Q96GA3 475 aaPredicted RBP30.6■■■□□ 2.49
RCCD1-202ENST00000554302 RTL1A6NKG5 1358 aa30.59■■■□□ 2.49
RCCD1-202ENST00000554302 CDCA8Q53HL2 280 aa30.59■■■□□ 2.49
RCCD1-202ENST00000554302 CLSPNQ9HAW4 1339 aa30.58■■■□□ 2.49
RCCD1-202ENST00000554302 AMPHP49418 695 aa30.58■■■□□ 2.49
RCCD1-202ENST00000554302 CNKSR2Q8WXI2 1034 aa30.57■■■□□ 2.48
RCCD1-202ENST00000554302 PDGFDQ9GZP0 370 aaPredicted RBP30.57■■■□□ 2.48
RCCD1-202ENST00000554302 BTAF1O14981 1849 aa30.57■■■□□ 2.48
RCCD1-202ENST00000554302 SLC15A2Q16348 729 aa30.56■■■□□ 2.48
RCCD1-202ENST00000554302 GGNBP2Q9H3C7 697 aa30.56■■■□□ 2.48
RCCD1-202ENST00000554302 STK32BQ9NY57 414 aa30.55■■■□□ 2.48
RCCD1-202ENST00000554302 PAPPAQ13219 1627 aa30.55■■■□□ 2.48
RCCD1-202ENST00000554302 RGPD2P0DJD1 1756 aa30.54■■■□□ 2.48
RCCD1-202ENST00000554302 MYOM1P52179 1685 aa30.54■■■□□ 2.48
RCCD1-202ENST00000554302 RRS1Q15050 365 aaKnown RBP30.53■■■□□ 2.48
RCCD1-202ENST00000554302 PPP1R1BQ9UD71 204 aaPredicted RBP30.52■■■□□ 2.48
RCCD1-202ENST00000554302 KIF20BQ96Q89 1820 aa30.52■■■□□ 2.48
RCCD1-202ENST00000554302 DDX54Q8TDD1 881 aaKnown RBP30.51■■■□□ 2.47
RCCD1-202ENST00000554302 SHANK3Q9BYB0 1731 aa30.5■■■□□ 2.47
RCCD1-202ENST00000554302 CARD14Q9BXL6 1004 aa30.5■■■□□ 2.47
RCCD1-202ENST00000554302 MEGF6O75095 1541 aa30.5■■■□□ 2.47
RCCD1-202ENST00000554302 NBPF6Q5VWK0 638 aa30.48■■■□□ 2.47
RCCD1-202ENST00000554302 NBPF4Q96M43 638 aa30.48■■■□□ 2.47
RCCD1-202ENST00000554302 KIF24Q5T7B8 1368 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms