RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 NUTM2EB1AL46 878 aaPredicted RBP10.91□□□□□ -0.66
ATXN3-224ENST00000554040 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
ATXN3-224ENST00000554040 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
ATXN3-224ENST00000554040 C19orf44Q9H6X5 657 aa10.91□□□□□ -0.66
ATXN3-224ENST00000554040 PHLPP1O60346 1717 aa10.91□□□□□ -0.66
ATXN3-224ENST00000554040 NCOA3Q9Y6Q9 1424 aa10.91□□□□□ -0.66
ATXN3-224ENST00000554040 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
ATXN3-224ENST00000554040 AFF2P51816 1311 aa10.9□□□□□ -0.66
ATXN3-224ENST00000554040 SMAPO00193 183 aa10.9□□□□□ -0.66
ATXN3-224ENST00000554040 RBM6P78332 1123 aaKnown RBP10.9□□□□□ -0.66
ATXN3-224ENST00000554040 QTRT2Q9H974 415 aaKnown RBP10.9□□□□□ -0.66
ATXN3-224ENST00000554040 SLC52A1Q9NWF4 448 aa10.9□□□□□ -0.66
ATXN3-224ENST00000554040 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
ATXN3-224ENST00000554040 COL16A1Q07092 1604 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-224ENST00000554040 ATF3P18847 181 aa10.89□□□□□ -0.67
ATXN3-224ENST00000554040 HDGFP51858 240 aaKnown RBP10.89□□□□□ -0.67
ATXN3-224ENST00000554040 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
ATXN3-224ENST00000554040 KCNV2Q8TDN2 545 aa10.89□□□□□ -0.67
ATXN3-224ENST00000554040 NPDC1Q9NQX5 325 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-224ENST00000554040 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-224ENST00000554040 TBX22Q9Y458 520 aa10.89□□□□□ -0.67
ATXN3-224ENST00000554040 EIF2AK4Q9P2K8 1649 aaKnown RBP10.88□□□□□ -0.67
ATXN3-224ENST00000554040 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
ATXN3-224ENST00000554040 MAST1Q9Y2H9 1570 aa10.88□□□□□ -0.67
ATXN3-224ENST00000554040 NWD1Q149M9 1564 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 NUTM2DQ5VT03 806 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-224ENST00000554040 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 LRCH3Q96II8 777 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 HPS5Q9UPZ3 1129 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 DUOX2Q9NRD8 1548 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 KANK1Q14678 1352 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 KIF15Q9NS87 1388 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 PIK3C2BO00750 1634 aa10.87□□□□□ -0.67
ATXN3-224ENST00000554040 TATDN2Q93075 761 aa10.86□□□□□ -0.67
ATXN3-224ENST00000554040 TSR3Q9UJK0 312 aaKnown RBP10.86□□□□□ -0.67
ATXN3-224ENST00000554040 PLEKHG1Q9ULL1 1385 aa10.86□□□□□ -0.67
ATXN3-224ENST00000554040 CEP152O94986 1710 aa10.85□□□□□ -0.67
ATXN3-224ENST00000554040 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-224ENST00000554040 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-224ENST00000554040 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
ATXN3-224ENST00000554040 C8orf37Q96NL8 207 aa10.85□□□□□ -0.67
ATXN3-224ENST00000554040 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
ATXN3-224ENST00000554040 RGS12O14924 1447 aa10.84□□□□□ -0.67
ATXN3-224ENST00000554040 NOS1P29475 1434 aa10.84□□□□□ -0.67
ATXN3-224ENST00000554040 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
ATXN3-224ENST00000554040 ERBINQ96RT1 1412 aa10.84□□□□□ -0.67
ATXN3-224ENST00000554040 SAMD7Q7Z3H4 446 aa10.84□□□□□ -0.67
ATXN3-224ENST00000554040 LRRC59Q96AG4 307 aaKnown RBP10.84□□□□□ -0.67
ATXN3-224ENST00000554040 NGLY1Q96IV0 654 aa10.84□□□□□ -0.67
ATXN3-224ENST00000554040 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
ATXN3-224ENST00000554040 RGS20O76081 388 aa10.83□□□□□ -0.68
ATXN3-224ENST00000554040 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
ATXN3-224ENST00000554040 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
ATXN3-224ENST00000554040 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
ATXN3-224ENST00000554040 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
ATXN3-224ENST00000554040 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATXN3-224ENST00000554040 ZFYVE9O95405 1425 aa10.82□□□□□ -0.68
ATXN3-224ENST00000554040 SETD5Q9C0A6 1442 aa10.82□□□□□ -0.68
ATXN3-224ENST00000554040 LMTK2Q8IWU2 1503 aa10.81□□□□□ -0.68
ATXN3-224ENST00000554040 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
ATXN3-224ENST00000554040 SHPRHQ149N8 1683 aa10.81□□□□□ -0.68
ATXN3-224ENST00000554040 RIMS2Q9UQ26 1411 aa10.81□□□□□ -0.68
ATXN3-224ENST00000554040 PIK3R4Q99570 1358 aa10.8□□□□□ -0.68
ATXN3-224ENST00000554040 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
ATXN3-224ENST00000554040 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
ATXN3-224ENST00000554040 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
ATXN3-224ENST00000554040 AMOTL2Q9Y2J4 779 aa10.8□□□□□ -0.68
ATXN3-224ENST00000554040 ABCC5O15440 1437 aa10.8□□□□□ -0.68
ATXN3-224ENST00000554040 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
ATXN3-224ENST00000554040 DIP2AQ14689 1571 aa10.79□□□□□ -0.68
ATXN3-224ENST00000554040 CHD2O14647 1828 aaKnown RBP10.79□□□□□ -0.68
ATXN3-224ENST00000554040 ADAMTS13Q76LX8 1427 aa10.78□□□□□ -0.68
ATXN3-224ENST00000554040 ADAMTS2O95450 1211 aa10.78□□□□□ -0.68
ATXN3-224ENST00000554040 TRPC5Q9UL62 973 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-224ENST00000554040 PPP4CP60510 307 aa10.77□□□□□ -0.69
ATXN3-224ENST00000554040 KCNC4Q03721 635 aa10.77□□□□□ -0.69
ATXN3-224ENST00000554040 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.69
ATXN3-224ENST00000554040 USP21Q9UK80 565 aa10.77□□□□□ -0.69
ATXN3-224ENST00000554040 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
ATXN3-224ENST00000554040 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.69
ATXN3-224ENST00000554040 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.76□□□□□ -0.69
ATXN3-224ENST00000554040 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
ATXN3-224ENST00000554040 DCCP43146 1447 aa10.75□□□□□ -0.69
ATXN3-224ENST00000554040 SETBP1Q9Y6X0 1596 aa10.75□□□□□ -0.69
ATXN3-224ENST00000554040 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
ATXN3-224ENST00000554040 ANKRD30AQ9BXX3 1397 aa10.75□□□□□ -0.69
ATXN3-224ENST00000554040 EP400Q96L91 3159 aa10.75□□□□□ -0.69
ATXN3-224ENST00000554040 PTPRUQ92729 1446 aa10.75□□□□□ -0.69
ATXN3-224ENST00000554040 ASXL1Q8IXJ9 1541 aa10.74□□□□□ -0.69
ATXN3-224ENST00000554040 EYA1Q99502 592 aa10.74□□□□□ -0.69
ATXN3-224ENST00000554040 MST1RQ04912 1400 aa10.74□□□□□ -0.69
ATXN3-224ENST00000554040 PTGDRQ13258 359 aa10.73□□□□□ -0.69
ATXN3-224ENST00000554040 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
ATXN3-224ENST00000554040 DAPK1P53355 1430 aa10.72□□□□□ -0.69
ATXN3-224ENST00000554040 ATRNO75882 1429 aa10.71□□□□□ -0.69
ATXN3-224ENST00000554040 APLP1P51693 650 aa10.71□□□□□ -0.69
ATXN3-224ENST00000554040 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
ATXN3-224ENST00000554040 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms