RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
ABCD4-220ENST00000553998 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
ABCD4-220ENST00000553998 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
ABCD4-220ENST00000553998 TOPAZ1Q8N9V7 1692 aa11.2□□□□□ -0.62
ABCD4-220ENST00000553998 ARHGEF28Q8N1W1 1705 aaKnown RBP11.19□□□□□ -0.62
ABCD4-220ENST00000553998 NLRP6P59044 892 aa11.19□□□□□ -0.62
ABCD4-220ENST00000553998 C1QTNF8P60827 252 aa11.19□□□□□ -0.62
ABCD4-220ENST00000553998 TOM1L2Q6ZVM7 507 aa11.19□□□□□ -0.62
ABCD4-220ENST00000553998 ARHGEF25Q86VW2 580 aa11.19□□□□□ -0.62
ABCD4-220ENST00000553998 FHDC1Q9C0D6 1143 aaPredicted RBP11.19□□□□□ -0.62
ABCD4-220ENST00000553998 STK32BQ9NY57 414 aa11.19□□□□□ -0.62
ABCD4-220ENST00000553998 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
ABCD4-220ENST00000553998 PPIP5K1Q6PFW1 1433 aa11.18□□□□□ -0.62
ABCD4-220ENST00000553998 MAP3K5Q99683 1374 aa11.18□□□□□ -0.62
ABCD4-220ENST00000553998 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
ABCD4-220ENST00000553998 SLIT3O75094 1523 aa11.18□□□□□ -0.62
ABCD4-220ENST00000553998 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
ABCD4-220ENST00000553998 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
ABCD4-220ENST00000553998 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
ABCD4-220ENST00000553998 CABP1Q9NZU7 370 aa11.17□□□□□ -0.62
ABCD4-220ENST00000553998 USP6P35125 1406 aa11.17□□□□□ -0.62
ABCD4-220ENST00000553998 EXOC5O00471 708 aa11.16□□□□□ -0.62
ABCD4-220ENST00000553998 LRRC37A3O60309 1634 aa11.16□□□□□ -0.62
ABCD4-220ENST00000553998 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
ABCD4-220ENST00000553998 KCNH5Q8NCM2 988 aa11.15□□□□□ -0.62
ABCD4-220ENST00000553998 ARXQ96QS3 562 aa11.15□□□□□ -0.62
ABCD4-220ENST00000553998 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
ABCD4-220ENST00000553998 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
ABCD4-220ENST00000553998 CPSF1Q10570 1443 aaKnown RBP11.14□□□□□ -0.63
ABCD4-220ENST00000553998 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
ABCD4-220ENST00000553998 COL18A1P39060 1754 aa11.13□□□□□ -0.63
ABCD4-220ENST00000553998 ZBTB7CA1YPR0 619 aa11.13□□□□□ -0.63
ABCD4-220ENST00000553998 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
ABCD4-220ENST00000553998 SBF2Q86WG5 1849 aa11.13□□□□□ -0.63
ABCD4-220ENST00000553998 MYOM1P52179 1685 aa11.13□□□□□ -0.63
ABCD4-220ENST00000553998 CCDC7Q96M83 1385 aa11.13□□□□□ -0.63
ABCD4-220ENST00000553998 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
ABCD4-220ENST00000553998 CEP350Q5VT06 3117 aa11.11□□□□□ -0.63
ABCD4-220ENST00000553998 SLC16A10Q8TF71 515 aa11.11□□□□□ -0.63
ABCD4-220ENST00000553998 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
ABCD4-220ENST00000553998 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
ABCD4-220ENST00000553998 TNS2Q63HR2 1409 aa11.1□□□□□ -0.63
ABCD4-220ENST00000553998 CSB-PGBD3P0DP91 1061 aa11.1□□□□□ -0.63
ABCD4-220ENST00000553998 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
ABCD4-220ENST00000553998 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
ABCD4-220ENST00000553998 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
ABCD4-220ENST00000553998 ABCC6O95255 1503 aa11.09□□□□□ -0.63
ABCD4-220ENST00000553998 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
ABCD4-220ENST00000553998 GPR162Q16538 588 aa11.08□□□□□ -0.64
ABCD4-220ENST00000553998 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
ABCD4-220ENST00000553998 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
ABCD4-220ENST00000553998 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
ABCD4-220ENST00000553998 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
ABCD4-220ENST00000553998 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
ABCD4-220ENST00000553998 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
ABCD4-220ENST00000553998 ACSBG1Q96GR2 724 aa11.07□□□□□ -0.64
ABCD4-220ENST00000553998 NFAT5O94916 1531 aa11.07□□□□□ -0.64
ABCD4-220ENST00000553998 ERBB3P21860 1342 aa11.07□□□□□ -0.64
ABCD4-220ENST00000553998 IL2RBP14784 551 aa11.06□□□□□ -0.64
ABCD4-220ENST00000553998 WNK3Q9BYP7 1800 aa11.05□□□□□ -0.64
ABCD4-220ENST00000553998 POLD1P28340 1107 aa11.04□□□□□ -0.64
ABCD4-220ENST00000553998 NHSQ6T4R5 1651 aa11.04□□□□□ -0.64
ABCD4-220ENST00000553998 PNPLA7Q6ZV29 1317 aa11.04□□□□□ -0.64
ABCD4-220ENST00000553998 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
ABCD4-220ENST00000553998 SOX12O15370 315 aa11.03□□□□□ -0.64
ABCD4-220ENST00000553998 GRIN3BO60391 1043 aa11.03□□□□□ -0.64
ABCD4-220ENST00000553998 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
ABCD4-220ENST00000553998 AKAP12Q02952 1782 aa11.02□□□□□ -0.65
ABCD4-220ENST00000553998 KTN1Q86UP2 1357 aaKnown RBP11.02□□□□□ -0.65
ABCD4-220ENST00000553998 CHD4Q14839 1912 aa11.01□□□□□ -0.65
ABCD4-220ENST00000553998 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
ABCD4-220ENST00000553998 NLGN2Q8NFZ4 835 aa11.01□□□□□ -0.65
ABCD4-220ENST00000553998 ANKRD24Q8TF21 1146 aa11.01□□□□□ -0.65
ABCD4-220ENST00000553998 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
ABCD4-220ENST00000553998 YBX3P16989 372 aaKnown RBP eCLIP11□□□□□ -0.65
ABCD4-220ENST00000553998 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
ABCD4-220ENST00000553998 TFCP2L1Q9NZI6 479 aa11□□□□□ -0.65
ABCD4-220ENST00000553998 SBNO2Q9Y2G9 1366 aa11□□□□□ -0.65
ABCD4-220ENST00000553998 IP6K1Q92551 441 aa10.99□□□□□ -0.65
ABCD4-220ENST00000553998 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
ABCD4-220ENST00000553998 NME9Q86XW9 330 aa10.98□□□□□ -0.65
ABCD4-220ENST00000553998 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
ABCD4-220ENST00000553998 CD163L1Q9NR16 1453 aa10.98□□□□□ -0.65
ABCD4-220ENST00000553998 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
ABCD4-220ENST00000553998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
ABCD4-220ENST00000553998 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
ABCD4-220ENST00000553998 DDX54Q8TDD1 881 aaKnown RBP10.97□□□□□ -0.65
ABCD4-220ENST00000553998 CD2APQ9Y5K6 639 aa10.97□□□□□ -0.65
ABCD4-220ENST00000553998 NSD2O96028 1365 aa10.97□□□□□ -0.65
ABCD4-220ENST00000553998 RGPD5Q99666 1765 aa10.97□□□□□ -0.65
ABCD4-220ENST00000553998 QSER1Q2KHR3 1735 aa10.96□□□□□ -0.65
ABCD4-220ENST00000553998 USP54Q70EL1 1684 aa10.96□□□□□ -0.65
ABCD4-220ENST00000553998 COL23A1Q86Y22 540 aaPredicted RBP10.96□□□□□ -0.65
ABCD4-220ENST00000553998 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
ABCD4-220ENST00000553998 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
ABCD4-220ENST00000553998 PUS7Q96PZ0 661 aaKnown RBP10.96□□□□□ -0.65
ABCD4-220ENST00000553998 SIN3AQ96ST3 1273 aa10.96□□□□□ -0.65
ABCD4-220ENST00000553998 BTAF1O14981 1849 aa10.95□□□□□ -0.66
ABCD4-220ENST00000553998 ATP10DQ9P241 1426 aa10.95□□□□□ -0.66
ABCD4-220ENST00000553998 HSPA6P17066 643 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms