RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 COL24A1Q17RW2 1714 aa13.46□□□□□ -0.25
PRKCH-208ENST00000553846 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
PRKCH-208ENST00000553846 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
PRKCH-208ENST00000553846 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-208ENST00000553846 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-208ENST00000553846 TRPM1Q7Z4N2 1603 aa13.44□□□□□ -0.26
PRKCH-208ENST00000553846 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
PRKCH-208ENST00000553846 SYT17Q9BSW7 474 aa13.44□□□□□ -0.26
PRKCH-208ENST00000553846 FHDC1Q9C0D6 1143 aaPredicted RBP13.44□□□□□ -0.26
PRKCH-208ENST00000553846 USP6P35125 1406 aa13.44□□□□□ -0.26
PRKCH-208ENST00000553846 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
PRKCH-208ENST00000553846 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
PRKCH-208ENST00000553846 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
PRKCH-208ENST00000553846 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
PRKCH-208ENST00000553846 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
PRKCH-208ENST00000553846 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
PRKCH-208ENST00000553846 DDB1Q16531 1140 aa13.42□□□□□ -0.26
PRKCH-208ENST00000553846 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
PRKCH-208ENST00000553846 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
PRKCH-208ENST00000553846 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
PRKCH-208ENST00000553846 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
PRKCH-208ENST00000553846 NFAT5O94916 1531 aa13.41□□□□□ -0.26
PRKCH-208ENST00000553846 NLRP13Q86W25 1043 aa13.41□□□□□ -0.26
PRKCH-208ENST00000553846 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
PRKCH-208ENST00000553846 TNS2Q63HR2 1409 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 ABCC6O95255 1503 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 QSER1Q2KHR3 1735 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 SENP3-EIF4A1A0A087X0R7 540 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
PRKCH-208ENST00000553846 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
PRKCH-208ENST00000553846 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
PRKCH-208ENST00000553846 BTAF1O14981 1849 aa13.38□□□□□ -0.27
PRKCH-208ENST00000553846 CDCA7Q9BWT1 371 aaPredicted RBP13.37□□□□□ -0.27
PRKCH-208ENST00000553846 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
PRKCH-208ENST00000553846 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
PRKCH-208ENST00000553846 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
PRKCH-208ENST00000553846 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
PRKCH-208ENST00000553846 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
PRKCH-208ENST00000553846 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
PRKCH-208ENST00000553846 NLRP6P59044 892 aa13.33□□□□□ -0.28
PRKCH-208ENST00000553846 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
PRKCH-208ENST00000553846 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
PRKCH-208ENST00000553846 ARXQ96QS3 562 aa13.33□□□□□ -0.28
PRKCH-208ENST00000553846 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
PRKCH-208ENST00000553846 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
PRKCH-208ENST00000553846 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
PRKCH-208ENST00000553846 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
PRKCH-208ENST00000553846 CABP1Q9NZU7 370 aa13.31□□□□□ -0.28
PRKCH-208ENST00000553846 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
PRKCH-208ENST00000553846 SRPK2P78362 688 aaKnown RBP13.3□□□□□ -0.28
PRKCH-208ENST00000553846 AKT1S1Q96B36 256 aa13.29□□□□□ -0.28
PRKCH-208ENST00000553846 ZBTB7CA1YPR0 619 aa13.28□□□□□ -0.28
PRKCH-208ENST00000553846 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-208ENST00000553846 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
PRKCH-208ENST00000553846 LY75O60449 1722 aa13.27□□□□□ -0.28
PRKCH-208ENST00000553846 EXOC5O00471 708 aa13.27□□□□□ -0.29
PRKCH-208ENST00000553846 ERBB3P21860 1342 aa13.27□□□□□ -0.29
PRKCH-208ENST00000553846 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
PRKCH-208ENST00000553846 LTN1O94822 1766 aa13.27□□□□□ -0.29
PRKCH-208ENST00000553846 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
PRKCH-208ENST00000553846 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
PRKCH-208ENST00000553846 ADCY9O60503 1353 aa13.25□□□□□ -0.29
PRKCH-208ENST00000553846 NSD2O96028 1365 aa13.25□□□□□ -0.29
PRKCH-208ENST00000553846 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
PRKCH-208ENST00000553846 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
PRKCH-208ENST00000553846 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
PRKCH-208ENST00000553846 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
PRKCH-208ENST00000553846 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
PRKCH-208ENST00000553846 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
PRKCH-208ENST00000553846 GPR162Q16538 588 aa13.23□□□□□ -0.29
PRKCH-208ENST00000553846 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
PRKCH-208ENST00000553846 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
PRKCH-208ENST00000553846 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
PRKCH-208ENST00000553846 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
PRKCH-208ENST00000553846 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.29
PRKCH-208ENST00000553846 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
PRKCH-208ENST00000553846 SOX12O15370 315 aa13.2□□□□□ -0.3
PRKCH-208ENST00000553846 IL2RBP14784 551 aa13.2□□□□□ -0.3
PRKCH-208ENST00000553846 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-208ENST00000553846 EVC2Q86UK5 1308 aa13.19□□□□□ -0.3
PRKCH-208ENST00000553846 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
PRKCH-208ENST00000553846 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
PRKCH-208ENST00000553846 POLD1P28340 1107 aa13.17□□□□□ -0.3
PRKCH-208ENST00000553846 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
PRKCH-208ENST00000553846 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
PRKCH-208ENST00000553846 KCNQ4P56696 695 aa13.16□□□□□ -0.3
PRKCH-208ENST00000553846 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
PRKCH-208ENST00000553846 C5P01031 1676 aa13.15□□□□□ -0.3
PRKCH-208ENST00000553846 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-208ENST00000553846 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
PRKCH-208ENST00000553846 TAF1LQ8IZX4 1826 aa13.15□□□□□ -0.3
PRKCH-208ENST00000553846 MEGF6O75095 1541 aa13.14□□□□□ -0.31
PRKCH-208ENST00000553846 PCNTO95613 3336 aa13.14□□□□□ -0.31
PRKCH-208ENST00000553846 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
PRKCH-208ENST00000553846 NME9Q86XW9 330 aa13.14□□□□□ -0.31
PRKCH-208ENST00000553846 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
PRKCH-208ENST00000553846 HSPA6P17066 643 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms