RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
NEK9-202ENST00000553823 LRRC59Q96AG4 307 aaKnown RBP15.66■□□□□ 0.1
NEK9-202ENST00000553823 RTL1A6NKG5 1358 aa15.65■□□□□ 0.1
NEK9-202ENST00000553823 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
NEK9-202ENST00000553823 ARHGEF25Q86VW2 580 aa15.65■□□□□ 0.1
NEK9-202ENST00000553823 BLMP54132 1417 aaPredicted RBP15.65■□□□□ 0.1
NEK9-202ENST00000553823 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
NEK9-202ENST00000553823 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
NEK9-202ENST00000553823 HOXC9P31274 260 aa15.64■□□□□ 0.09
NEK9-202ENST00000553823 IL13P35225 146 aa15.64■□□□□ 0.09
NEK9-202ENST00000553823 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
NEK9-202ENST00000553823 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
NEK9-202ENST00000553823 IP6K1Q92551 441 aa15.63■□□□□ 0.09
NEK9-202ENST00000553823 COL16A1Q07092 1604 aaPredicted RBP15.62■□□□□ 0.09
NEK9-202ENST00000553823 ZBTB7CA1YPR0 619 aa15.62■□□□□ 0.09
NEK9-202ENST00000553823 EIF4A2Q14240 407 aaKnown RBP15.62■□□□□ 0.09
NEK9-202ENST00000553823 ABCA3Q99758 1704 aa15.62■□□□□ 0.09
NEK9-202ENST00000553823 ZC3H6P61129 1189 aaKnown RBP15.61■□□□□ 0.09
NEK9-202ENST00000553823 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
NEK9-202ENST00000553823 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
NEK9-202ENST00000553823 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
NEK9-202ENST00000553823 CPDO75976 1380 aa15.6■□□□□ 0.09
NEK9-202ENST00000553823 COL22A1Q8NFW1 1626 aaPredicted RBP15.59■□□□□ 0.09
NEK9-202ENST00000553823 CCDC146Q8IYE0 955 aa15.59■□□□□ 0.09
NEK9-202ENST00000553823 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
NEK9-202ENST00000553823 RGPD1P0DJD0 1748 aa15.59■□□□□ 0.09
NEK9-202ENST00000553823 RGPD5Q99666 1765 aa15.59■□□□□ 0.09
NEK9-202ENST00000553823 COL18A1P39060 1754 aa15.58■□□□□ 0.08
NEK9-202ENST00000553823 FCHSD2O94868 740 aa15.58■□□□□ 0.08
NEK9-202ENST00000553823 RUNDC1Q96C34 613 aa15.58■□□□□ 0.08
NEK9-202ENST00000553823 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
NEK9-202ENST00000553823 ABCC6O95255 1503 aa15.58■□□□□ 0.08
NEK9-202ENST00000553823 CENPBP07199 599 aaPredicted RBP15.57■□□□□ 0.08
NEK9-202ENST00000553823 KIAA0232Q92628 1395 aa15.57■□□□□ 0.08
NEK9-202ENST00000553823 HMOX1P09601 288 aa15.56■□□□□ 0.08
NEK9-202ENST00000553823 LTV1Q96GA3 475 aaPredicted RBP15.56■□□□□ 0.08
NEK9-202ENST00000553823 RSPH6AQ9H0K4 717 aa15.56■□□□□ 0.08
NEK9-202ENST00000553823 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
NEK9-202ENST00000553823 APAF1O14727 1248 aa15.55■□□□□ 0.08
NEK9-202ENST00000553823 PLEKHF1Q96S99 279 aa15.55■□□□□ 0.08
NEK9-202ENST00000553823 EYA1Q99502 592 aa15.55■□□□□ 0.08
NEK9-202ENST00000553823 PRDM11Q9NQV5 511 aa15.55■□□□□ 0.08
NEK9-202ENST00000553823 IGSF1Q8N6C5 1336 aa15.54■□□□□ 0.08
NEK9-202ENST00000553823 PRKAR2BP31323 418 aa15.54■□□□□ 0.08
NEK9-202ENST00000553823 CHRNA2Q15822 529 aa15.54■□□□□ 0.08
NEK9-202ENST00000553823 SULT6B1Q6IMI4 303 aa15.54■□□□□ 0.08
NEK9-202ENST00000553823 AXIN2Q9Y2T1 843 aa15.54■□□□□ 0.08
NEK9-202ENST00000553823 RGPD2P0DJD1 1756 aa15.54■□□□□ 0.08
NEK9-202ENST00000553823 MAPK8IP3Q9UPT6 1336 aa15.53■□□□□ 0.08
NEK9-202ENST00000553823 NEFMP07197 916 aa15.53■□□□□ 0.08
NEK9-202ENST00000553823 TCP11L2Q8N4U5 519 aa15.53■□□□□ 0.08
NEK9-202ENST00000553823 NGEFQ8N5V2 710 aa15.53■□□□□ 0.08
NEK9-202ENST00000553823 ANKRD24Q8TF21 1146 aa15.53■□□□□ 0.08
NEK9-202ENST00000553823 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.08
NEK9-202ENST00000553823 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
NEK9-202ENST00000553823 KDRP35968 1356 aa15.51■□□□□ 0.07
NEK9-202ENST00000553823 ERBB3P21860 1342 aa15.51■□□□□ 0.07
NEK9-202ENST00000553823 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
NEK9-202ENST00000553823 JCADQ9P266 1359 aa15.5■□□□□ 0.07
NEK9-202ENST00000553823 NBPF6Q5VWK0 638 aa15.5■□□□□ 0.07
NEK9-202ENST00000553823 NBPF4Q96M43 638 aa15.5■□□□□ 0.07
NEK9-202ENST00000553823 FAM208AQ9UK61 1670 aaKnown RBP15.5■□□□□ 0.07
NEK9-202ENST00000553823 CAMTA1Q9Y6Y1 1673 aa15.49■□□□□ 0.07
NEK9-202ENST00000553823 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
NEK9-202ENST00000553823 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
NEK9-202ENST00000553823 CSB-PGBD3P0DP91 1061 aa15.48■□□□□ 0.07
NEK9-202ENST00000553823 TMPOP42166 694 aaKnown RBP15.48■□□□□ 0.07
NEK9-202ENST00000553823 PHACTR3Q96KR7 559 aa15.48■□□□□ 0.07
NEK9-202ENST00000553823 RRP7AQ9Y3A4 280 aaKnown RBP15.48■□□□□ 0.07
NEK9-202ENST00000553823 HSPA1LP34931 641 aa15.47■□□□□ 0.07
NEK9-202ENST00000553823 NCAPD2Q15021 1401 aa15.47■□□□□ 0.07
NEK9-202ENST00000553823 NEUROD2Q15784 382 aa15.47■□□□□ 0.07
NEK9-202ENST00000553823 USHBP1Q8N6Y0 703 aa15.47■□□□□ 0.07
NEK9-202ENST00000553823 DLG5Q8TDM6 1919 aa15.47■□□□□ 0.07
NEK9-202ENST00000553823 NUTM2BA6NNL0 878 aaPredicted RBP15.46■□□□□ 0.07
NEK9-202ENST00000553823 NUTM2EB1AL46 878 aaPredicted RBP15.46■□□□□ 0.07
NEK9-202ENST00000553823 PDE3BQ13370 1112 aa15.46■□□□□ 0.07
NEK9-202ENST00000553823 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
NEK9-202ENST00000553823 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
NEK9-202ENST00000553823 NUTM2AQ8IVF1 878 aaPredicted RBP15.46■□□□□ 0.07
NEK9-202ENST00000553823 NLRP2Q9NX02 1062 aa15.46■□□□□ 0.07
NEK9-202ENST00000553823 COL5A2P05997 1499 aaPredicted RBP15.46■□□□□ 0.06
NEK9-202ENST00000553823 ZNF521Q96K83 1311 aa15.45■□□□□ 0.06
NEK9-202ENST00000553823 ADAMTS2O95450 1211 aa15.45■□□□□ 0.06
NEK9-202ENST00000553823 WDR17Q8IZU2 1322 aa15.44■□□□□ 0.06
NEK9-202ENST00000553823 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
NEK9-202ENST00000553823 RIPK4P57078 832 aa15.44■□□□□ 0.06
NEK9-202ENST00000553823 EVA1CP58658 441 aa15.44■□□□□ 0.06
NEK9-202ENST00000553823 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
NEK9-202ENST00000553823 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
NEK9-202ENST00000553823 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
NEK9-202ENST00000553823 PLCH1Q4KWH8 1693 aa15.42■□□□□ 0.06
NEK9-202ENST00000553823 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
NEK9-202ENST00000553823 TOM1L2Q6ZVM7 507 aa15.42■□□□□ 0.06
NEK9-202ENST00000553823 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
NEK9-202ENST00000553823 STRN4Q9NRL3 753 aa15.42■□□□□ 0.06
NEK9-202ENST00000553823 LMOD3Q0VAK6 560 aa15.41■□□□□ 0.06
NEK9-202ENST00000553823 WDR63Q8IWG1 891 aa15.41■□□□□ 0.06
NEK9-202ENST00000553823 TRIM35Q9UPQ4 493 aa15.41■□□□□ 0.06
NEK9-202ENST00000553823 MTHFSDQ2M296 383 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms