RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 COL18A1P39060 1754 aa14.13□□□□□ -0.15
ACTN1-210ENST00000553779 C11orf95C9JLR9 678 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-210ENST00000553779 CAMKK2Q96RR4 588 aa14.12□□□□□ -0.15
ACTN1-210ENST00000553779 AATKQ6ZMQ8 1374 aa14.11□□□□□ -0.15
ACTN1-210ENST00000553779 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
ACTN1-210ENST00000553779 DDB1Q16531 1140 aa14.11□□□□□ -0.15
ACTN1-210ENST00000553779 SIN3AQ96ST3 1273 aa14.11□□□□□ -0.15
ACTN1-210ENST00000553779 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
ACTN1-210ENST00000553779 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
ACTN1-210ENST00000553779 KCNH5Q8NCM2 988 aa14.1□□□□□ -0.15
ACTN1-210ENST00000553779 PPP1R1BQ9UD71 204 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-210ENST00000553779 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-210ENST00000553779 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
ACTN1-210ENST00000553779 TTC21BQ7Z4L5 1316 aa14.08□□□□□ -0.16
ACTN1-210ENST00000553779 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
ACTN1-210ENST00000553779 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-210ENST00000553779 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
ACTN1-210ENST00000553779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
ACTN1-210ENST00000553779 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
ACTN1-210ENST00000553779 TONSLQ96HA7 1378 aa14.06□□□□□ -0.16
ACTN1-210ENST00000553779 ABCC6O95255 1503 aa14.05□□□□□ -0.16
ACTN1-210ENST00000553779 CARD11Q9BXL7 1154 aa14.05□□□□□ -0.16
ACTN1-210ENST00000553779 NFAT5O94916 1531 aa14.05□□□□□ -0.16
ACTN1-210ENST00000553779 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
ACTN1-210ENST00000553779 HDGFL2Q7Z4V5 671 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-210ENST00000553779 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-210ENST00000553779 SPON1Q9HCB6 807 aa14.03□□□□□ -0.16
ACTN1-210ENST00000553779 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
ACTN1-210ENST00000553779 FAM208AQ9UK61 1670 aaKnown RBP14.03□□□□□ -0.16
ACTN1-210ENST00000553779 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
ACTN1-210ENST00000553779 ARHGEF25Q86VW2 580 aa14.02□□□□□ -0.17
ACTN1-210ENST00000553779 AXIN2Q9Y2T1 843 aa14.02□□□□□ -0.17
ACTN1-210ENST00000553779 EXOC5O00471 708 aa14.01□□□□□ -0.17
ACTN1-210ENST00000553779 CARD10Q9BWT7 1032 aa14.01□□□□□ -0.17
ACTN1-210ENST00000553779 NLRP2Q9NX02 1062 aa14.01□□□□□ -0.17
ACTN1-210ENST00000553779 BTAF1O14981 1849 aa14.01□□□□□ -0.17
ACTN1-210ENST00000553779 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
ACTN1-210ENST00000553779 TNS2Q63HR2 1409 aa14□□□□□ -0.17
ACTN1-210ENST00000553779 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
ACTN1-210ENST00000553779 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
ACTN1-210ENST00000553779 KCNQ2O43526 872 aa13.99□□□□□ -0.17
ACTN1-210ENST00000553779 MARCH10Q8NA82 808 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-210ENST00000553779 PLSCR1O15162 318 aa13.98□□□□□ -0.17
ACTN1-210ENST00000553779 NME9Q86XW9 330 aa13.98□□□□□ -0.17
ACTN1-210ENST00000553779 STK32BQ9NY57 414 aa13.98□□□□□ -0.17
ACTN1-210ENST00000553779 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
ACTN1-210ENST00000553779 MYOM1P52179 1685 aa13.97□□□□□ -0.17
ACTN1-210ENST00000553779 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.17
ACTN1-210ENST00000553779 RGPD2P0DJD1 1756 aa13.96□□□□□ -0.17
ACTN1-210ENST00000553779 ANO8Q9HCE9 1232 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-210ENST00000553779 CHD4Q14839 1912 aa13.96□□□□□ -0.18
ACTN1-210ENST00000553779 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
ACTN1-210ENST00000553779 ERBB3P21860 1342 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 IL2RBP14784 551 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 ANKRD24Q8TF21 1146 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 ACSBG1Q96GR2 724 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 BCL9O00512 1426 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
ACTN1-210ENST00000553779 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
ACTN1-210ENST00000553779 ZBTB7AO95365 584 aa13.94□□□□□ -0.18
ACTN1-210ENST00000553779 YY1P25490 414 aa13.94□□□□□ -0.18
ACTN1-210ENST00000553779 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-210ENST00000553779 SLC12A5Q9H2X9 1139 aa13.94□□□□□ -0.18
ACTN1-210ENST00000553779 DOT1LQ8TEK3 1739 aa13.93□□□□□ -0.18
ACTN1-210ENST00000553779 TXNRD1Q16881 649 aa13.93□□□□□ -0.18
ACTN1-210ENST00000553779 COG3Q96JB2 828 aa13.92□□□□□ -0.18
ACTN1-210ENST00000553779 AMPHP49418 695 aa13.9□□□□□ -0.18
ACTN1-210ENST00000553779 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-210ENST00000553779 SLC24A1O60721 1099 aa13.89□□□□□ -0.19
ACTN1-210ENST00000553779 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
ACTN1-210ENST00000553779 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
ACTN1-210ENST00000553779 QSER1Q2KHR3 1735 aa13.89□□□□□ -0.19
ACTN1-210ENST00000553779 SMG6Q86US8 1419 aaKnown RBP13.89□□□□□ -0.19
ACTN1-210ENST00000553779 DDX54Q8TDD1 881 aaKnown RBP13.88□□□□□ -0.19
ACTN1-210ENST00000553779 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-210ENST00000553779 PAPPAQ13219 1627 aa13.87□□□□□ -0.19
ACTN1-210ENST00000553779 ST20-MTHFSA0A0A6YYL1 179 aa13.87□□□□□ -0.19
ACTN1-210ENST00000553779 PROM2Q8N271 834 aa13.87□□□□□ -0.19
ACTN1-210ENST00000553779 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-210ENST00000553779 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
ACTN1-210ENST00000553779 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
ACTN1-210ENST00000553779 IP6K1Q92551 441 aa13.86□□□□□ -0.19
ACTN1-210ENST00000553779 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
ACTN1-210ENST00000553779 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
ACTN1-210ENST00000553779 LY75O60449 1722 aa13.85□□□□□ -0.19
ACTN1-210ENST00000553779 TMF1P82094 1093 aa13.85□□□□□ -0.19
ACTN1-210ENST00000553779 ANKRD36BQ8N2N9 1353 aa13.84□□□□□ -0.19
ACTN1-210ENST00000553779 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
ACTN1-210ENST00000553779 RTL1A6NKG5 1358 aa13.83□□□□□ -0.19
ACTN1-210ENST00000553779 USP47Q96K76 1375 aa13.83□□□□□ -0.19
ACTN1-210ENST00000553779 HOXC9P31274 260 aa13.83□□□□□ -0.2
ACTN1-210ENST00000553779 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-210ENST00000553779 CDCA8Q53HL2 280 aa13.82□□□□□ -0.2
ACTN1-210ENST00000553779 MAP2P11137 1827 aaKnown RBP13.82□□□□□ -0.2
ACTN1-210ENST00000553779 ITGB4P16144 1822 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 POLD1P28340 1107 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 PTGER2P43116 358 aa13.81□□□□□ -0.2
ACTN1-210ENST00000553779 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms