RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 AMPHP49418 695 aa18.65■□□□□ 0.58
ABCD4-219ENST00000553745 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
ABCD4-219ENST00000553745 RGPD5Q99666 1765 aa18.65■□□□□ 0.58
ABCD4-219ENST00000553745 UBAP1LF5GYI3 381 aa18.64■□□□□ 0.57
ABCD4-219ENST00000553745 IL13P35225 146 aa18.64■□□□□ 0.57
ABCD4-219ENST00000553745 PIP4K2BP78356 416 aa18.64■□□□□ 0.57
ABCD4-219ENST00000553745 HSP90AB2PQ58FF8 381 aa18.64■□□□□ 0.57
ABCD4-219ENST00000553745 CERKQ8TCT0 537 aa18.64■□□□□ 0.57
ABCD4-219ENST00000553745 U2AF1L5P0DN76 240 aaPredicted RBP18.63■□□□□ 0.57
ABCD4-219ENST00000553745 HOXC9P31274 260 aa18.63■□□□□ 0.57
ABCD4-219ENST00000553745 U2AF1Q01081 240 aaKnown RBP eCLIP18.63■□□□□ 0.57
ABCD4-219ENST00000553745 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
ABCD4-219ENST00000553745 COL22A1Q8NFW1 1626 aaPredicted RBP18.63■□□□□ 0.57
ABCD4-219ENST00000553745 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
ABCD4-219ENST00000553745 CABLES1Q8TDN4 633 aa18.63■□□□□ 0.57
ABCD4-219ENST00000553745 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
ABCD4-219ENST00000553745 COL18A1P39060 1754 aa18.62■□□□□ 0.57
ABCD4-219ENST00000553745 ARHGEF25Q86VW2 580 aa18.61■□□□□ 0.57
ABCD4-219ENST00000553745 RGPD2P0DJD1 1756 aa18.61■□□□□ 0.57
ABCD4-219ENST00000553745 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
ABCD4-219ENST00000553745 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
ABCD4-219ENST00000553745 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.57
ABCD4-219ENST00000553745 IP6K1Q92551 441 aa18.58■□□□□ 0.57
ABCD4-219ENST00000553745 ABCC6O95255 1503 aa18.58■□□□□ 0.57
ABCD4-219ENST00000553745 LRRC59Q96AG4 307 aaKnown RBP18.58■□□□□ 0.56
ABCD4-219ENST00000553745 HMOX1P09601 288 aa18.56■□□□□ 0.56
ABCD4-219ENST00000553745 RUNDC1Q96C34 613 aa18.56■□□□□ 0.56
ABCD4-219ENST00000553745 SALL2Q9Y467 1007 aaPredicted RBP18.56■□□□□ 0.56
ABCD4-219ENST00000553745 CPDO75976 1380 aa18.56■□□□□ 0.56
ABCD4-219ENST00000553745 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
ABCD4-219ENST00000553745 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
ABCD4-219ENST00000553745 LMO7Q8WWI1 1683 aa18.55■□□□□ 0.56
ABCD4-219ENST00000553745 CAMTA1Q9Y6Y1 1673 aa18.55■□□□□ 0.56
ABCD4-219ENST00000553745 APAF1O14727 1248 aa18.55■□□□□ 0.56
ABCD4-219ENST00000553745 PLEKHF1Q96S99 279 aa18.55■□□□□ 0.56
ABCD4-219ENST00000553745 PPP4R2Q9NY27 417 aa18.55■□□□□ 0.56
ABCD4-219ENST00000553745 LTV1Q96GA3 475 aaPredicted RBP18.54■□□□□ 0.56
ABCD4-219ENST00000553745 HAP1P54257 671 aaPredicted RBP18.53■□□□□ 0.56
ABCD4-219ENST00000553745 IGSF1Q8N6C5 1336 aa18.53■□□□□ 0.56
ABCD4-219ENST00000553745 FAM208AQ9UK61 1670 aaKnown RBP18.53■□□□□ 0.56
ABCD4-219ENST00000553745 FCHSD2O94868 740 aa18.53■□□□□ 0.56
ABCD4-219ENST00000553745 PRKAR2BP31323 418 aa18.53■□□□□ 0.56
ABCD4-219ENST00000553745 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
ABCD4-219ENST00000553745 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
ABCD4-219ENST00000553745 EYA1Q99502 592 aa18.52■□□□□ 0.55
ABCD4-219ENST00000553745 DLG5Q8TDM6 1919 aa18.51■□□□□ 0.55
ABCD4-219ENST00000553745 CHRNA2Q15822 529 aa18.51■□□□□ 0.55
ABCD4-219ENST00000553745 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
ABCD4-219ENST00000553745 TCP11L2Q8N4U5 519 aa18.51■□□□□ 0.55
ABCD4-219ENST00000553745 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
ABCD4-219ENST00000553745 KDRP35968 1356 aa18.5■□□□□ 0.55
ABCD4-219ENST00000553745 ANKRD24Q8TF21 1146 aa18.5■□□□□ 0.55
ABCD4-219ENST00000553745 ERBB3P21860 1342 aa18.49■□□□□ 0.55
ABCD4-219ENST00000553745 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
ABCD4-219ENST00000553745 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
ABCD4-219ENST00000553745 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
ABCD4-219ENST00000553745 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
ABCD4-219ENST00000553745 COL14A1Q05707 1796 aaKnown RBP18.48■□□□□ 0.55
ABCD4-219ENST00000553745 NCAPD2Q15021 1401 aa18.47■□□□□ 0.55
ABCD4-219ENST00000553745 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
ABCD4-219ENST00000553745 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
ABCD4-219ENST00000553745 PLCH1Q4KWH8 1693 aa18.46■□□□□ 0.55
ABCD4-219ENST00000553745 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
ABCD4-219ENST00000553745 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
ABCD4-219ENST00000553745 PHACTR3Q96KR7 559 aa18.46■□□□□ 0.55
ABCD4-219ENST00000553745 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
ABCD4-219ENST00000553745 COL5A2P05997 1499 aaPredicted RBP18.45■□□□□ 0.54
ABCD4-219ENST00000553745 NEFMP07197 916 aa18.45■□□□□ 0.54
ABCD4-219ENST00000553745 TMPOP42166 694 aaKnown RBP18.45■□□□□ 0.54
ABCD4-219ENST00000553745 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
ABCD4-219ENST00000553745 JCADQ9P266 1359 aa18.42■□□□□ 0.54
ABCD4-219ENST00000553745 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
ABCD4-219ENST00000553745 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
ABCD4-219ENST00000553745 NFE2L2Q16236 605 aa18.41■□□□□ 0.54
ABCD4-219ENST00000553745 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
ABCD4-219ENST00000553745 NRAPQ86VF7 1730 aa18.41■□□□□ 0.54
ABCD4-219ENST00000553745 CSB-PGBD3P0DP91 1061 aa18.4■□□□□ 0.54
ABCD4-219ENST00000553745 RIPK4P57078 832 aa18.4■□□□□ 0.54
ABCD4-219ENST00000553745 CCDC27Q2M243 656 aa18.4■□□□□ 0.54
ABCD4-219ENST00000553745 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
ABCD4-219ENST00000553745 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
ABCD4-219ENST00000553745 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
ABCD4-219ENST00000553745 HSPA1LP34931 641 aa18.39■□□□□ 0.53
ABCD4-219ENST00000553745 NLRP2Q9NX02 1062 aa18.39■□□□□ 0.53
ABCD4-219ENST00000553745 WDR17Q8IZU2 1322 aa18.39■□□□□ 0.53
ABCD4-219ENST00000553745 NUTM2BA6NNL0 878 aaPredicted RBP18.38■□□□□ 0.53
ABCD4-219ENST00000553745 NUTM2EB1AL46 878 aaPredicted RBP18.38■□□□□ 0.53
ABCD4-219ENST00000553745 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
ABCD4-219ENST00000553745 NUTM2AQ8IVF1 878 aaPredicted RBP18.38■□□□□ 0.53
ABCD4-219ENST00000553745 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
ABCD4-219ENST00000553745 GOLGA2Q08379 1002 aa18.37■□□□□ 0.53
ABCD4-219ENST00000553745 PARP4Q9UKK3 1724 aaKnown RBP18.37■□□□□ 0.53
ABCD4-219ENST00000553745 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
ABCD4-219ENST00000553745 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
ABCD4-219ENST00000553745 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
ABCD4-219ENST00000553745 SPINK5Q9NQ38 1064 aaPredicted RBP18.36■□□□□ 0.53
ABCD4-219ENST00000553745 STRN4Q9NRL3 753 aa18.36■□□□□ 0.53
ABCD4-219ENST00000553745 BTG4Q9NY30 223 aa18.36■□□□□ 0.53
ABCD4-219ENST00000553745 MEGF6O75095 1541 aa18.36■□□□□ 0.53
ABCD4-219ENST00000553745 LRP6O75581 1613 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms