RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 FAM83GA6ND36 823 aa24.45■■□□□ 1.5
PSEN1-208ENST00000553719 ADAMTS2O95450 1211 aa24.45■■□□□ 1.5
PSEN1-208ENST00000553719 PRDM11Q9NQV5 511 aa24.45■■□□□ 1.5
PSEN1-208ENST00000553719 COL3A1P02461 1466 aaPredicted RBP24.45■■□□□ 1.5
PSEN1-208ENST00000553719 BLMP54132 1417 aaPredicted RBP24.44■■□□□ 1.5
PSEN1-208ENST00000553719 INSRP06213 1382 aa24.44■■□□□ 1.5
PSEN1-208ENST00000553719 ANP32CO43423 234 aa24.43■■□□□ 1.5
PSEN1-208ENST00000553719 HOXC9P31274 260 aa24.43■■□□□ 1.5
PSEN1-208ENST00000553719 CHRNA2Q15822 529 aa24.43■■□□□ 1.5
PSEN1-208ENST00000553719 IP6K1Q92551 441 aa24.43■■□□□ 1.5
PSEN1-208ENST00000553719 AXIN2Q9Y2T1 843 aa24.42■■□□□ 1.5
PSEN1-208ENST00000553719 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.41■■□□□ 1.5
PSEN1-208ENST00000553719 COL5A2P05997 1499 aaPredicted RBP24.41■■□□□ 1.5
PSEN1-208ENST00000553719 MTHFSP49914 203 aa24.41■■□□□ 1.5
PSEN1-208ENST00000553719 FNBP4Q8N3X1 1017 aaPredicted RBP24.39■■□□□ 1.49
PSEN1-208ENST00000553719 BCL9LQ86UU0 1499 aa24.38■■□□□ 1.49
PSEN1-208ENST00000553719 AMPHP49418 695 aa24.38■■□□□ 1.49
PSEN1-208ENST00000553719 HSP90AB2PQ58FF8 381 aa24.38■■□□□ 1.49
PSEN1-208ENST00000553719 FAM208AQ9UK61 1670 aaKnown RBP24.37■■□□□ 1.49
PSEN1-208ENST00000553719 ZBTB7CA1YPR0 619 aa24.36■■□□□ 1.49
PSEN1-208ENST00000553719 C8orf37Q96NL8 207 aa24.36■■□□□ 1.49
PSEN1-208ENST00000553719 ERBB3P21860 1342 aa24.35■■□□□ 1.49
PSEN1-208ENST00000553719 RGPD1P0DJD0 1748 aa24.35■■□□□ 1.49
PSEN1-208ENST00000553719 BTG4Q9NY30 223 aa24.35■■□□□ 1.49
PSEN1-208ENST00000553719 PPM1GO15355 546 aaPredicted RBP24.34■■□□□ 1.49
PSEN1-208ENST00000553719 MEX3CQ5U5Q3 659 aaKnown RBP24.33■■□□□ 1.49
PSEN1-208ENST00000553719 NGLY1Q96IV0 654 aa24.32■■□□□ 1.48
PSEN1-208ENST00000553719 NCAPD2Q15021 1401 aa24.32■■□□□ 1.48
PSEN1-208ENST00000553719 AFF2P51816 1311 aa24.32■■□□□ 1.48
PSEN1-208ENST00000553719 EIF4A2Q14240 407 aaKnown RBP24.31■■□□□ 1.48
PSEN1-208ENST00000553719 ANKRD24Q8TF21 1146 aa24.31■■□□□ 1.48
PSEN1-208ENST00000553719 RGPD2P0DJD1 1756 aa24.31■■□□□ 1.48
PSEN1-208ENST00000553719 WDR17Q8IZU2 1322 aa24.31■■□□□ 1.48
PSEN1-208ENST00000553719 IL13P35225 146 aa24.29■■□□□ 1.48
PSEN1-208ENST00000553719 UNC5CLQ8IV45 518 aa24.29■■□□□ 1.48
PSEN1-208ENST00000553719 CCDC184Q52MB2 194 aa24.28■■□□□ 1.48
PSEN1-208ENST00000553719 ATRNO75882 1429 aa24.27■■□□□ 1.48
PSEN1-208ENST00000553719 MIER1Q8N108 512 aa24.27■■□□□ 1.48
PSEN1-208ENST00000553719 CFAP53Q96M91 514 aa24.27■■□□□ 1.48
PSEN1-208ENST00000553719 CRB1P82279 1406 aa24.27■■□□□ 1.48
PSEN1-208ENST00000553719 USP21Q9UK80 565 aa24.26■■□□□ 1.47
PSEN1-208ENST00000553719 DIAPH1O60610 1272 aaKnown RBP24.25■■□□□ 1.47
PSEN1-208ENST00000553719 LARP1Q6PKG0 1096 aaKnown RBP24.25■■□□□ 1.47
PSEN1-208ENST00000553719 VPS72Q15906 364 aa24.24■■□□□ 1.47
PSEN1-208ENST00000553719 LTV1Q96GA3 475 aaPredicted RBP24.24■■□□□ 1.47
PSEN1-208ENST00000553719 STRN4Q9NRL3 753 aa24.24■■□□□ 1.47
PSEN1-208ENST00000553719 IGSF1Q8N6C5 1336 aa24.24■■□□□ 1.47
PSEN1-208ENST00000553719 CCER2I3L3R5 266 aa24.23■■□□□ 1.47
PSEN1-208ENST00000553719 NBPF6Q5VWK0 638 aa24.23■■□□□ 1.47
PSEN1-208ENST00000553719 NBPF4Q96M43 638 aa24.23■■□□□ 1.47
PSEN1-208ENST00000553719 GLI3P10071 1580 aa24.23■■□□□ 1.47
PSEN1-208ENST00000553719 WNK3Q9BYP7 1800 aa24.23■■□□□ 1.47
PSEN1-208ENST00000553719 SPATA31A5Q5VU36 1347 aa24.22■■□□□ 1.47
PSEN1-208ENST00000553719 SPATA31A7Q8IWB4 1347 aa24.22■■□□□ 1.47
PSEN1-208ENST00000553719 EYA1Q99502 592 aa24.22■■□□□ 1.47
PSEN1-208ENST00000553719 RGS17Q9UGC6 210 aaPredicted RBP24.22■■□□□ 1.47
PSEN1-208ENST00000553719 KDRP35968 1356 aa24.21■■□□□ 1.47
PSEN1-208ENST00000553719 CARD10Q9BWT7 1032 aa24.21■■□□□ 1.47
PSEN1-208ENST00000553719 SPATA31A1Q5TZJ5 1347 aa24.2■■□□□ 1.46
PSEN1-208ENST00000553719 EVA1CP58658 441 aa24.2■■□□□ 1.46
PSEN1-208ENST00000553719 CSB-PGBD3P0DP91 1061 aa24.19■■□□□ 1.46
PSEN1-208ENST00000553719 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
PSEN1-208ENST00000553719 TOM1L2Q6ZVM7 507 aa24.18■■□□□ 1.46
PSEN1-208ENST00000553719 MRS2Q9HD23 443 aa24.18■■□□□ 1.46
PSEN1-208ENST00000553719 DISP2A7MBM2 1401 aa24.18■■□□□ 1.46
PSEN1-208ENST00000553719 NLRP2Q9NX02 1062 aa24.17■■□□□ 1.46
PSEN1-208ENST00000553719 TRPC5Q9UL62 973 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-208ENST00000553719 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
PSEN1-208ENST00000553719 USHBP1Q8N6Y0 703 aa24.15■■□□□ 1.46
PSEN1-208ENST00000553719 PNISRQ8TF01 805 aaKnown RBP24.15■■□□□ 1.46
PSEN1-208ENST00000553719 NUDCQ9Y266 331 aa24.15■■□□□ 1.46
PSEN1-208ENST00000553719 AEBP1Q8IUX7 1158 aa24.14■■□□□ 1.45
PSEN1-208ENST00000553719 MEGF6O75095 1541 aa24.14■■□□□ 1.45
PSEN1-208ENST00000553719 PARP4Q9UKK3 1724 aaKnown RBP24.13■■□□□ 1.45
PSEN1-208ENST00000553719 GJD4Q96KN9 370 aaPredicted RBP24.13■■□□□ 1.45
PSEN1-208ENST00000553719 QTRT2Q9H974 415 aaKnown RBP24.13■■□□□ 1.45
PSEN1-208ENST00000553719 THRAP3Q9Y2W1 955 aaKnown RBP24.13■■□□□ 1.45
PSEN1-208ENST00000553719 PLEKHG2Q9H7P9 1386 aa24.13■■□□□ 1.45
PSEN1-208ENST00000553719 U2SURPO15042 1029 aaKnown RBP24.12■■□□□ 1.45
PSEN1-208ENST00000553719 BARGINQ6ZT62 677 aa24.12■■□□□ 1.45
PSEN1-208ENST00000553719 TCP11L2Q8N4U5 519 aa24.12■■□□□ 1.45
PSEN1-208ENST00000553719 PKD1L3Q7Z443 1732 aa24.11■■□□□ 1.45
PSEN1-208ENST00000553719 SULT6B1Q6IMI4 303 aa24.11■■□□□ 1.45
PSEN1-208ENST00000553719 RSPH6AQ9H0K4 717 aa24.1■■□□□ 1.45
PSEN1-208ENST00000553719 LRRC37A3O60309 1634 aa24.1■■□□□ 1.45
PSEN1-208ENST00000553719 OVOS2A0A0G2JMS6 1433 aa24.1■■□□□ 1.45
PSEN1-208ENST00000553719 U2AF1L5P0DN76 240 aaPredicted RBP24.09■■□□□ 1.45
PSEN1-208ENST00000553719 U2AF1Q01081 240 aaKnown RBP eCLIP24.09■■□□□ 1.45
PSEN1-208ENST00000553719 POTEAQ6S8J7 498 aa24.09■■□□□ 1.45
PSEN1-208ENST00000553719 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
PSEN1-208ENST00000553719 SHANK3Q9BYB0 1731 aa24.08■■□□□ 1.45
PSEN1-208ENST00000553719 ONECUT3O60422 494 aaPredicted RBP24.08■■□□□ 1.45
PSEN1-208ENST00000553719 HMOX1P09601 288 aa24.08■■□□□ 1.45
PSEN1-208ENST00000553719 USP35Q9P2H5 1018 aa24.08■■□□□ 1.45
PSEN1-208ENST00000553719 FCHSD2O94868 740 aa24.07■■□□□ 1.44
PSEN1-208ENST00000553719 ADAMTS8Q9UP79 889 aa24.07■■□□□ 1.44
PSEN1-208ENST00000553719 CCDC9Q9Y3X0 531 aaKnown RBP24.07■■□□□ 1.44
PSEN1-208ENST00000553719 RBM6P78332 1123 aaKnown RBP24.06■■□□□ 1.44
PSEN1-208ENST00000553719 WDR43Q15061 677 aaKnown RBP eCLIP24.06■■□□□ 1.44
PSEN1-208ENST00000553719 IL2RBP14784 551 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms