RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 PPP1R26Q5T8A7 1209 aaPredicted RBP9.5□□□□□ -0.89
FCF1-204ENST00000553673 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
FCF1-204ENST00000553673 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
FCF1-204ENST00000553673 KCNMA1Q12791 1236 aa9.49□□□□□ -0.89
FCF1-204ENST00000553673 CBLBQ13191 982 aa9.49□□□□□ -0.89
FCF1-204ENST00000553673 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
FCF1-204ENST00000553673 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
FCF1-204ENST00000553673 POLR3EQ9NVU0 708 aa9.48□□□□□ -0.89
FCF1-204ENST00000553673 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
FCF1-204ENST00000553673 GSK3AP49840 483 aa9.47□□□□□ -0.89
FCF1-204ENST00000553673 CTDSPL2Q05D32 466 aa9.47□□□□□ -0.89
FCF1-204ENST00000553673 Q6ZVU0 165 aa9.47□□□□□ -0.89
FCF1-204ENST00000553673 LOC100996750A0A140TA64 210 aa9.46□□□□□ -0.9
FCF1-204ENST00000553673 SPINT1O43278 529 aa9.46□□□□□ -0.9
FCF1-204ENST00000553673 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
FCF1-204ENST00000553673 ARHGAP9Q9BRR9 750 aa9.46□□□□□ -0.9
FCF1-204ENST00000553673 KRTAP4-6Q9BYQ5 205 aa9.46□□□□□ -0.9
FCF1-204ENST00000553673 PDXDC2PQ6P474 469 aa9.45□□□□□ -0.9
FCF1-204ENST00000553673 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
FCF1-204ENST00000553673 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
FCF1-204ENST00000553673 KCTD15Q96SI1 283 aaPredicted RBP9.45□□□□□ -0.9
FCF1-204ENST00000553673 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
FCF1-204ENST00000553673 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
FCF1-204ENST00000553673 SLC24A3Q9HC58 644 aa9.45□□□□□ -0.9
FCF1-204ENST00000553673 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
FCF1-204ENST00000553673 FKBPLQ9UIM3 349 aa9.44□□□□□ -0.9
FCF1-204ENST00000553673 NANOS1Q8WY41 292 aaKnown RBP9.43□□□□□ -0.9
FCF1-204ENST00000553673 AGBL1Q96MI9 1066 aa9.43□□□□□ -0.9
FCF1-204ENST00000553673 RNFT1Q5M7Z0 435 aa9.42□□□□□ -0.9
FCF1-204ENST00000553673 ZBTB33Q86T24 672 aa9.42□□□□□ -0.9
FCF1-204ENST00000553673 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
FCF1-204ENST00000553673 ADAMTS8Q9UP79 889 aa9.42□□□□□ -0.9
FCF1-204ENST00000553673 SLC35F4A4IF30 521 aa9.41□□□□□ -0.9
FCF1-204ENST00000553673 RELBQ01201 579 aa9.41□□□□□ -0.9
FCF1-204ENST00000553673 DHX9Q08211 1270 aaKnown RBP9.41□□□□□ -0.9
FCF1-204ENST00000553673 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
FCF1-204ENST00000553673 CTSOP43234 321 aaPredicted RBP9.4□□□□□ -0.9
FCF1-204ENST00000553673 RASSF7Q02833 373 aa9.4□□□□□ -0.9
FCF1-204ENST00000553673 NR6A1Q15406 480 aa9.4□□□□□ -0.9
FCF1-204ENST00000553673 INTS6LQ5JSJ4 861 aaKnown RBP9.4□□□□□ -0.9
FCF1-204ENST00000553673 CDC14CA4D256 554 aa9.39□□□□□ -0.91
FCF1-204ENST00000553673 RNF225M0QZC1 329 aaPredicted RBP9.39□□□□□ -0.91
FCF1-204ENST00000553673 GDF11O95390 407 aa9.39□□□□□ -0.91
FCF1-204ENST00000553673 ITGA6P23229 1130 aa9.39□□□□□ -0.91
FCF1-204ENST00000553673 SUZ12Q15022 739 aaKnown RBP9.39□□□□□ -0.91
FCF1-204ENST00000553673 ZNF385CQ66K41 422 aaPredicted RBP9.39□□□□□ -0.91
FCF1-204ENST00000553673 VWA5B2Q8N398 1253 aa9.39□□□□□ -0.91
FCF1-204ENST00000553673 SVOPQ8N4V2 548 aa9.39□□□□□ -0.91
FCF1-204ENST00000553673 INSM2Q96T92 566 aaPredicted RBP9.39□□□□□ -0.91
FCF1-204ENST00000553673 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
FCF1-204ENST00000553673 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
FCF1-204ENST00000553673 POLMQ9NP87 494 aaPredicted RBP9.38□□□□□ -0.91
FCF1-204ENST00000553673 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
FCF1-204ENST00000553673 ZNF395Q9H8N7 513 aaPredicted RBP9.37□□□□□ -0.91
FCF1-204ENST00000553673 PTK2Q05397 1052 aa9.36□□□□□ -0.91
FCF1-204ENST00000553673 SV2AQ7L0J3 742 aa9.36□□□□□ -0.91
FCF1-204ENST00000553673 ADAM32Q8TC27 787 aa9.36□□□□□ -0.91
FCF1-204ENST00000553673 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
FCF1-204ENST00000553673 RNF217Q8TC41 542 aa9.35□□□□□ -0.91
FCF1-204ENST00000553673 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
FCF1-204ENST00000553673 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
FCF1-204ENST00000553673 RAB15P59190 212 aa9.34□□□□□ -0.91
FCF1-204ENST00000553673 SENP3-EIF4A1A0A087X0R7 540 aa9.33□□□□□ -0.92
FCF1-204ENST00000553673 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
FCF1-204ENST00000553673 NBPF20Q3BBV1 942 aa9.33□□□□□ -0.92
FCF1-204ENST00000553673 ZNF784Q8NCA9 323 aaPredicted RBP9.33□□□□□ -0.92
FCF1-204ENST00000553673 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
FCF1-204ENST00000553673 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
FCF1-204ENST00000553673 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
FCF1-204ENST00000553673 SH3D19Q5HYK7 790 aa9.32□□□□□ -0.92
FCF1-204ENST00000553673 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
FCF1-204ENST00000553673 AP1G2O75843 785 aa9.31□□□□□ -0.92
FCF1-204ENST00000553673 ARHGEF15O94989 841 aa9.31□□□□□ -0.92
FCF1-204ENST00000553673 ADH1AP07327 375 aa9.31□□□□□ -0.92
FCF1-204ENST00000553673 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
FCF1-204ENST00000553673 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
FCF1-204ENST00000553673 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
FCF1-204ENST00000553673 IRS1P35568 1242 aa9.3□□□□□ -0.92
FCF1-204ENST00000553673 ERVH48-1M5A8F1 160 aa9.29□□□□□ -0.92
FCF1-204ENST00000553673 LILRA1O75019 489 aa9.29□□□□□ -0.92
FCF1-204ENST00000553673 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
FCF1-204ENST00000553673 ADAMTS2O95450 1211 aa9.28□□□□□ -0.92
FCF1-204ENST00000553673 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
FCF1-204ENST00000553673 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
FCF1-204ENST00000553673 HMX1Q9NP08 348 aaPredicted RBP9.28□□□□□ -0.92
FCF1-204ENST00000553673 PTGIRP43119 386 aa9.27□□□□□ -0.93
FCF1-204ENST00000553673 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.93
FCF1-204ENST00000553673 PNMA1Q8ND90 353 aa9.27□□□□□ -0.93
FCF1-204ENST00000553673 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
FCF1-204ENST00000553673 GPAT2Q6NUI2 795 aa9.26□□□□□ -0.93
FCF1-204ENST00000553673 LYSMD3Q7Z3D4 306 aa9.26□□□□□ -0.93
FCF1-204ENST00000553673 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
FCF1-204ENST00000553673 KDM4CQ9H3R0 1056 aa9.26□□□□□ -0.93
FCF1-204ENST00000553673 CUEDC1Q9NWM3 386 aaPredicted RBP9.26□□□□□ -0.93
FCF1-204ENST00000553673 DNMT3AQ9Y6K1 912 aaPredicted RBP9.26□□□□□ -0.93
FCF1-204ENST00000553673 USP17L8P0C7I0 530 aa9.25□□□□□ -0.93
FCF1-204ENST00000553673 GAS6Q14393 721 aa9.25□□□□□ -0.93
FCF1-204ENST00000553673 LYPD4Q6UWN0 246 aa9.25□□□□□ -0.93
FCF1-204ENST00000553673 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
FCF1-204ENST00000553673 ESPNB1AK53 854 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms