RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
ACTN1-209ENST00000553659 WNK3Q9BYP7 1800 aa22.5■■□□□ 1.19
ACTN1-209ENST00000553659 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
ACTN1-209ENST00000553659 OVOS2A0A0G2JMS6 1433 aa22.49■■□□□ 1.19
ACTN1-209ENST00000553659 OVOS2A0A0J9YW53 1432 aa22.49■■□□□ 1.19
ACTN1-209ENST00000553659 OVOS2Q6IE36 1432 aa22.49■■□□□ 1.19
ACTN1-209ENST00000553659 DDB1Q16531 1140 aa22.49■■□□□ 1.19
ACTN1-209ENST00000553659 AXIN2Q9Y2T1 843 aa22.49■■□□□ 1.19
ACTN1-209ENST00000553659 TTC21BQ7Z4L5 1316 aa22.49■■□□□ 1.19
ACTN1-209ENST00000553659 KCNH5Q8NCM2 988 aa22.48■■□□□ 1.19
ACTN1-209ENST00000553659 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
ACTN1-209ENST00000553659 ROCK2O75116 1388 aaKnown RBP22.48■■□□□ 1.19
ACTN1-209ENST00000553659 TONSLQ96HA7 1378 aa22.48■■□□□ 1.19
ACTN1-209ENST00000553659 RGPD3A6NKT7 1758 aaPredicted RBP22.48■■□□□ 1.19
ACTN1-209ENST00000553659 RGPD4Q7Z3J3 1758 aa22.48■■□□□ 1.19
ACTN1-209ENST00000553659 ARHGEF25Q86VW2 580 aa22.47■■□□□ 1.19
ACTN1-209ENST00000553659 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
ACTN1-209ENST00000553659 TTC21AQ8NDW8 1320 aa22.46■■□□□ 1.19
ACTN1-209ENST00000553659 CPSF1Q10570 1443 aaKnown RBP22.46■■□□□ 1.19
ACTN1-209ENST00000553659 PLSCR1O15162 318 aa22.45■■□□□ 1.18
ACTN1-209ENST00000553659 CDCA7Q9BWT1 371 aaPredicted RBP22.45■■□□□ 1.18
ACTN1-209ENST00000553659 BCL11BQ9C0K0 894 aaPredicted RBP22.43■■□□□ 1.18
ACTN1-209ENST00000553659 CARD10Q9BWT7 1032 aa22.42■■□□□ 1.18
ACTN1-209ENST00000553659 KTN1Q86UP2 1357 aaKnown RBP22.41■■□□□ 1.18
ACTN1-209ENST00000553659 SOX12O15370 315 aa22.41■■□□□ 1.18
ACTN1-209ENST00000553659 MARCH10Q8NA82 808 aaPredicted RBP22.41■■□□□ 1.18
ACTN1-209ENST00000553659 SPON1Q9HCB6 807 aa22.41■■□□□ 1.18
ACTN1-209ENST00000553659 BCL9O00512 1426 aa22.4■■□□□ 1.18
ACTN1-209ENST00000553659 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
ACTN1-209ENST00000553659 CSB-PGBD3P0DP91 1061 aa22.4■■□□□ 1.18
ACTN1-209ENST00000553659 KCNQ2O43526 872 aa22.39■■□□□ 1.17
ACTN1-209ENST00000553659 PTF1AQ7RTS3 328 aa22.39■■□□□ 1.17
ACTN1-209ENST00000553659 NFAT5O94916 1531 aa22.39■■□□□ 1.17
ACTN1-209ENST00000553659 SBNO2Q9Y2G9 1366 aa22.37■■□□□ 1.17
ACTN1-209ENST00000553659 ABCC6O95255 1503 aa22.36■■□□□ 1.17
ACTN1-209ENST00000553659 EXOC5O00471 708 aa22.36■■□□□ 1.17
ACTN1-209ENST00000553659 PPP1R1BQ9UD71 204 aaPredicted RBP22.36■■□□□ 1.17
ACTN1-209ENST00000553659 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
ACTN1-209ENST00000553659 PROM2Q8N271 834 aa22.35■■□□□ 1.17
ACTN1-209ENST00000553659 USP54Q70EL1 1684 aa22.34■■□□□ 1.17
ACTN1-209ENST00000553659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.34■■□□□ 1.17
ACTN1-209ENST00000553659 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
ACTN1-209ENST00000553659 LTN1O94822 1766 aa22.33■■□□□ 1.17
ACTN1-209ENST00000553659 CASZ1Q86V15 1759 aa22.33■■□□□ 1.17
ACTN1-209ENST00000553659 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.17
ACTN1-209ENST00000553659 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
ACTN1-209ENST00000553659 CD163L1Q9NR16 1453 aa22.3■■□□□ 1.16
ACTN1-209ENST00000553659 NINLQ9Y2I6 1382 aa22.3■■□□□ 1.16
ACTN1-209ENST00000553659 KAT6BQ8WYB5 2073 aa22.3■■□□□ 1.16
ACTN1-209ENST00000553659 TXNRD1Q16881 649 aa22.29■■□□□ 1.16
ACTN1-209ENST00000553659 NME9Q86XW9 330 aa22.29■■□□□ 1.16
ACTN1-209ENST00000553659 TMC1Q8TDI8 760 aa22.29■■□□□ 1.16
ACTN1-209ENST00000553659 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
ACTN1-209ENST00000553659 TNS2Q63HR2 1409 aa22.28■■□□□ 1.16
ACTN1-209ENST00000553659 ERBB3P21860 1342 aa22.28■■□□□ 1.16
ACTN1-209ENST00000553659 DCAF8L1A6NGE4 600 aa22.27■■□□□ 1.16
ACTN1-209ENST00000553659 PDGFDQ9GZP0 370 aaPredicted RBP22.27■■□□□ 1.16
ACTN1-209ENST00000553659 SLC12A5Q9H2X9 1139 aa22.27■■□□□ 1.16
ACTN1-209ENST00000553659 NLRP2Q9NX02 1062 aa22.27■■□□□ 1.16
ACTN1-209ENST00000553659 NHSQ6T4R5 1651 aa22.26■■□□□ 1.15
ACTN1-209ENST00000553659 YY1P25490 414 aa22.26■■□□□ 1.15
ACTN1-209ENST00000553659 STK32BQ9NY57 414 aa22.25■■□□□ 1.15
ACTN1-209ENST00000553659 EDC4Q6P2E9 1401 aaKnown RBP22.24■■□□□ 1.15
ACTN1-209ENST00000553659 IL2RBP14784 551 aa22.24■■□□□ 1.15
ACTN1-209ENST00000553659 PUS7Q96PZ0 661 aaKnown RBP22.24■■□□□ 1.15
ACTN1-209ENST00000553659 TERF2IPQ9NYB0 399 aa22.24■■□□□ 1.15
ACTN1-209ENST00000553659 SLC15A2Q16348 729 aa22.23■■□□□ 1.15
ACTN1-209ENST00000553659 ZBTB7AO95365 584 aa22.22■■□□□ 1.15
ACTN1-209ENST00000553659 ANKRD24Q8TF21 1146 aa22.22■■□□□ 1.15
ACTN1-209ENST00000553659 ACSBG1Q96GR2 724 aa22.21■■□□□ 1.15
ACTN1-209ENST00000553659 BTAF1O14981 1849 aa22.2■■□□□ 1.14
ACTN1-209ENST00000553659 PTGER2P43116 358 aa22.2■■□□□ 1.14
ACTN1-209ENST00000553659 ATF5Q9Y2D1 282 aaPredicted RBP22.2■■□□□ 1.14
ACTN1-209ENST00000553659 A0A1W2PP64 1363 aa22.2■■□□□ 1.14
ACTN1-209ENST00000553659 MYOM1P52179 1685 aa22.19■■□□□ 1.14
ACTN1-209ENST00000553659 IP6K1Q92551 441 aa22.17■■□□□ 1.14
ACTN1-209ENST00000553659 FAM208AQ9UK61 1670 aaKnown RBP22.17■■□□□ 1.14
ACTN1-209ENST00000553659 MTFR1LQ9H019 292 aa22.16■■□□□ 1.14
ACTN1-209ENST00000553659 PAPPAQ13219 1627 aa22.14■■□□□ 1.14
ACTN1-209ENST00000553659 TESK2Q96S53 571 aa22.14■■□□□ 1.13
ACTN1-209ENST00000553659 SLC24A1O60721 1099 aa22.12■■□□□ 1.13
ACTN1-209ENST00000553659 SGIP1Q9BQI5 828 aa22.12■■□□□ 1.13
ACTN1-209ENST00000553659 ST20-MTHFSA0A0A6YYL1 179 aa22.11■■□□□ 1.13
ACTN1-209ENST00000553659 LTV1Q96GA3 475 aaPredicted RBP22.11■■□□□ 1.13
ACTN1-209ENST00000553659 COG3Q96JB2 828 aa22.11■■□□□ 1.13
ACTN1-209ENST00000553659 SYT17Q9BSW7 474 aa22.11■■□□□ 1.13
ACTN1-209ENST00000553659 FHDC1Q9C0D6 1143 aaPredicted RBP22.11■■□□□ 1.13
ACTN1-209ENST00000553659 RGPD2P0DJD1 1756 aa22.1■■□□□ 1.13
ACTN1-209ENST00000553659 DDX54Q8TDD1 881 aaKnown RBP22.1■■□□□ 1.13
ACTN1-209ENST00000553659 LRRC4BQ9NT99 713 aa22.09■■□□□ 1.13
ACTN1-209ENST00000553659 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
ACTN1-209ENST00000553659 CHD4Q14839 1912 aa22.08■■□□□ 1.12
ACTN1-209ENST00000553659 QSER1Q2KHR3 1735 aa22.07■■□□□ 1.12
ACTN1-209ENST00000553659 HOXC9P31274 260 aa22.07■■□□□ 1.12
ACTN1-209ENST00000553659 AMPHP49418 695 aa22.07■■□□□ 1.12
ACTN1-209ENST00000553659 ZNF827Q17R98 1081 aa22.07■■□□□ 1.12
ACTN1-209ENST00000553659 SLC27A3Q5K4L6 730 aa22.07■■□□□ 1.12
ACTN1-209ENST00000553659 ARXQ96QS3 562 aa22.06■■□□□ 1.12
ACTN1-209ENST00000553659 FBLN1P23142 703 aa22.05■■□□□ 1.12
ACTN1-209ENST00000553659 ANKRD36BQ8N2N9 1353 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms